| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1744848 | 55 (1.160) | 4 (0.090) | 4/244 | NT | 7.1% | intergenic (+18/+23) | mdtK/ydhQ | multidrug efflux pump MdtK/adhesin‑like autotransporter YdhQ |
| ? | NC_000913 | = 1744854 | 54 (1.240) | intergenic (+24/+17) | mdtK/ydhQ | multidrug efflux pump MdtK/adhesin‑like autotransporter YdhQ | |||||
CAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCC > NC_000913/1744712‑1744990 | cagGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGACGATGTTGCGTATGCGGTTCCTGCAACGTCCGCCGTCAGCCCTCATTCTGCACCGAGCCTCCCGCTCCTAAAGACACGCCGCCACCTTCACg > 1:504895/1‑143 (MQ=255)cacgctgctGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACg < 2:814242/140‑1 (MQ=255) cggcTTCTCGATAGGCTGTACTATGGGCCTGAGGTCGGCAGCCATGCTGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGg > 2:878468‑M2/2‑142 (MQ=255) ttCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGCTGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACACGGCGCGACCTTCACGggttg < 2:361525‑M2/143‑6 (MQ=255) tCTGGATAGTCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCcgtgaaggttgc < 1:774612‑M1/143‑13 (MQ=255) ggATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGTTGTTGCGTATGCAGTTCCTGCAACGTCTGCCGTCAGCCATCATTATGAAACGGGCATGCTGCTGATAAAGTGAAGGCGCAACCGTTCCAggttgcgcc < 2:393708‑M2/143‑10 (MQ=255) cagGCTTTAGTCTTGGCCTGACGTCGGCAGCCATTGTGATGATGTTGCGTATGCGTTTCCTGCCACGCCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCcgtgaaggttgcgccttg < 2:221518‑M1/142‑19 (MQ=255) tttATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCGGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAGCCTTCACGGGCTGCGCCTgcgtcgt > 1:187683/1‑137 (MQ=255) tttAGTAGTGGCCTGACGTCGGCAGCCATTAGGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTAtttt < 1:117294/143‑1 (MQ=255) ttattaTTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTAttttt < 1:445586/143‑1 (MQ=255) ttattaTTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTAttttt > 2:632302/1‑143 (MQ=255) attattGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTAc < 1:188098/143‑1 (MQ=255) tattGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCAAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGc > 1:128819/1‑143 (MQ=255) ttGGCCTGACGTCGGCAGCCATTGGTACGGTGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCGGTCTTGTTACGCAg > 2:116329/1‑143 (MQ=255) tcggCCTGACGGCGGCAGCCCTTATGATGATGCTGCGTACGCGGTCCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACCATCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAg < 1:72546/141‑1 (MQ=255) ggCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGc < 1:440589/143‑1 (MQ=255) gACTTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAg < 2:796252/143‑1 (MQ=255) aCGTCGCGAGCCGTTAGGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATGCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCcgtgaaggttgcgccttgtctttattagcgggatgctc < 2:424948‑M1/143‑39 (MQ=255) tCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGtt > 1:530382/1‑143 (MQ=255) cGGCAGCCGTTATGATGATGGTGCGTATGCGGGTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTATTAAAGACAAGGCGCAACCcgtgaaggttgcgccttgtctttattagcgggatgctcgttg < 1:442281‑M1/143‑43 (MQ=255) gCACCCAGTGTGATGTTGTTCCGTAGGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCCCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTgcg < 2:223964/143‑1 (MQ=255) cAGCCATTAGGATGATGTTGGGCAGGCGGTGCCTGCAACGTCGGCCGTCAGCGAGCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTGTTACGCAGGCTGGAGCGTTgcgc < 2:683638/143‑1 (MQ=255) gCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATGTTTACGCAGGCTGAAGCGTTGCGCCa > 2:245702/1‑143 (MQ=255) ccATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTCATAAAGACAACGCGCAACCTTCACGGGTCGCGCCTGTACCTTTACGCCGGCTGGCGCATTGCCCCaa > 1:916676/1‑143 (MQ=255) aTTATGATGCTGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATc < 1:199425/143‑1 (MQ=255) aTTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAGGACGAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAAtg > 1:479832/1‑142 (MQ=255) tgatgatgTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCCTCATTCTGCAACGAGCATCCCGCTACTACAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTAGTGTTACGCAAGCTGGCGCGTTGCGCCAATCCCGt > 1:153664/1‑143 (MQ=255) tgaggatgTTGCGTATGCGCAATCTGCCGCGTCTGCCGTCAGCCATCATTCTGCAACGAGCAGCCCGCCAATAAAGCCAAGTCGCACCCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGt < 2:148746/143‑1 (MQ=255) tgatgTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCtt > 2:406740/1‑143 (MQ=255) gTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCgcc > 2:819115/1‑141 (MQ=255) gTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGATACGCCTGTATATTTACGCAGACTAGAGCGTTACGCAAATCCCGACTTCGTc > 2:146957/1‑143 (MQ=255) ttGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGCGCGTTGCGCCAATCCCGTCTTCGTcc > 1:670251/1‑142 (MQ=255) gccgaggCGGTTCCTGCAACGTCGGCCGTCAGCCACCATCCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCAGGAGCGTTGCGCCAATCCCGTCTTCGTCTgg < 2:250642/137‑1 (MQ=255) gCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTgg < 1:660113/143‑1 (MQ=255) gCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTgg < 2:443347/143‑1 (MQ=255) tATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTg > 1:869225/1‑143 (MQ=255) gCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTaa < 1:870012/143‑1 (MQ=255) gTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAAttt > 1:881466/1‑143 (MQ=255) tCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTTGCTGTAATTTCa < 1:437819/143‑1 (MQ=255) cTGCAACGTCTGCCGTCAGCCATCGTTCTCGAACGGTCATCCCGCTAATAAGTACAAGGCGCAGCCTTCACGGGTCGCGACTGTATTTTTACGCAGGCTGGATCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCaga < 2:14895/143‑1 (MQ=255) tGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCaggg > 1:207029/1‑141 (MQ=255) cGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGACTGTAATTTCAGAGCGTTa < 1:637414/143‑1 (MQ=255) tCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTaca > 1:689588/1‑143 (MQ=255) tCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACAGGTTGCGCCTGTATTTCTACGCAGGCTGGAGCATTGCGCCAAACCCGTCTCCGTCTGAATGCACATTCAGAGCGGTaca > 2:570797/1‑143 (MQ=255) tCTGCCGTCAGCCATCATGCGGCAACGAGCATGCCGCTAATAAAGACGAGGCGCAACCTTCACGGGTTGCGCCTGTATGTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTaca < 1:190258/143‑1 (MQ=255) tGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCCCTCCCGTCTTCGTCTGGCTGTATTTTCATCGCGttctacg > 1:28323/1‑138 (MQ=255) ccGTCAGCCATCATTCTCAAAGGAGTATCGCTCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACaga < 1:882768/143‑1 (MQ=255) cGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACagag < 1:527145/143‑1 (MQ=255) aGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCCATCCCGTCTTCGTCTGGCTGTCATTTCAGAGCGTTACACAGAGTTTg > 1:373588/1‑143 (MQ=255) gCCATCATTCTGCAACGAGCCTCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGc < 1:59790/143‑1 (MQ=255) catcatTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGACTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCCGAGCGTTACACAGAGTTTGCCg > 1:257505/1‑143 (MQ=255) atcatTCTGCAACGTGCATCCCGCGAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTGACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGa < 2:340154/143‑1 (MQ=255) tcatTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGAc > 2:127024/1‑143 (MQ=255) atTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTg > 1:638966/1‑143 (MQ=255) cAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGggttgcgccttgtctttaatagcgggatgctcgttgcagaatgatggctgacggcagacgttgcaggacccgcatacgcaccatcatcataacggctgccg < 1:442281‑M2/143‑102 (MQ=255) aaCGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTg > 2:884428/1‑143 (MQ=255) aCGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGt > 1:421065/1‑143 (MQ=255) gAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGggttgcgccttgtctttattagcgggatgctcgttgcagcatgatggctgacggcagacgttgcaggaaccgcatacgcaacatcatcctaacggctcgcgacgt < 2:424948‑M2/143‑106 (MQ=255) cATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCCGTAATTTCAGAGCGGTACCCAGAGTTTGCCGACTGGCCTCTGTTAcct > 1:190696/1‑143 (MQ=255) ccGCTAATAAAGGCTAGGCGCTACCTTCACGTGTTGCGTCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTATACAGAGTTTGTCGTCTGGCATCTGTTATCTCAAc < 2:40657/143‑1 (MQ=255) taaAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACCCAGAGTTTGCCGACTGGAAACCGTTGTCTCAGCGTGtata > 2:608366/1‑143 (MQ=255) aaaGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTatat > 1:205068/1‑143 (MQ=255) ccacgcgcTATCTTCACGTGTTGCGCTTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGGCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCg < 2:582247/139‑1 (MQ=255) cagggCGCAACCTTCAGGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGGTCGCTCACTAGCAGCTGTTATCTCTACGTGTATATCCCCg < 2:623748/140‑1 (MQ=255) cAAGGCGCAACCTTCACGggttgcgccttgtctttattagcgggatgctcgttgcagaatgatggctgacggcaggcgtggcaggaaacgcatacgcaacatcatcacaatggctgccgacgtcaggccaagactaaagcctg < 2:221518‑M2/143‑126 (MQ=255) ggCGCAACCtggaacggttgcgccttcactttatcagcagcatgcccgtttcataatgatggctgacggcagacgttgcaggaactgcatacgcaacaacatcataatggctgccgacgtcaggccaataataaagcctatcc < 2:393708‑M1/143‑135 (MQ=255) gcAACCTTCACGggttgcgccttgtctttattagcgggatgctcgttgcagaatgatggctgacggcagacgttgcaggaaccgcatacgcaacatcatcataatggctgccgacgtcaggccaataataaagactatccaga < 1:774612‑M2/143‑132 (MQ=255) cAACCcgtgaaggtcgcgccgtgtctttattagcgggatgctcgttgcagaatgatggctgacggcagacgttgcaggaaccgcatacgcaacatcagcataatggctgccgacgtcaggccaataataaagcctatccagaa < 2:361525‑M1/143‑139 (MQ=255) ccgtgaaggttgcgccttgtctttattagcgggatgctcgttgcagaatgatggctgacggcagacgttgcaggaaccgcatacgcaacatcatcagcatggctgccgacctcaggcccatagtacagcctatcgagaagccg > 2:878468‑M1/1‑1 (MQ=255) cTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTcccc < 1:759718/143‑1 (MQ=255) cTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATACCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCAGCTGTTATCTCAACGTGTATATACCCGCTAACTTcccc > 1:197850/1‑143 (MQ=255) | CAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAATAAAGACAAGGCGCAACCTTCACGGGTTGCGCCTGTATTTTTACGCAGGCTGGAGCGTTGCGCCAATCCCGTCTTCGTCTGGCTGTAATTTCAGAGCGTTACACAGAGTTTGCCGACTGGCATCTGTTATCTCAACGTGTATATCCCCGGTAACTTCCCC > NC_000913/1744712‑1744990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |