New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3639355	NA (NA)	2 (0.050) +CGAGACTGATTACA	3/236	NT	NA	intergenic (+214/+30)	pitA/uspB	metal phosphate:H(+) symporter PitA/putative universal stress (ethanol tolerance) protein B
	?	NC_000913	= 4137897	NA (NA)					intergenic (‑240/+35)	yijF/gldA	conserved protein YijF/L‑1,2‑propanediol dehydrogenase/glycerol dehydrogenase

GATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCACCCGCTCACAGCGGCGAATAAATTCATCA  >  NC_000913/3639213‑3639493                                                                                                                                                |                                                                                                                                           gATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCt                                                                                                                                            <  2:442606/143‑1 (MQ=255)      ggcgTGGTCGCCTTCTCCGGCCTACACAAACATGCAACTTCAATAGATCGCAGAGATTATGCCGGCATCATAAGCG‑AGGTCTTAGGAATAATGCGGCGTTTGTAATCTGTTTCGAGCGGGTCAGTTTACTGGCCCGCtttttt                                                                                                                                       <  2:919417/143‑1 (MQ=255)       gcttGAACGCCGTGTCCGGTCGATAAAAACTTGCAAATTCAATAGAGTGCAGAGATTATGTAGGCCTGATAAGCGGAGCGCATCAG‑GCAATTTTGCGTTTGTTATCAGTCTCGAGCGGGTCAGTTTCCTGGCCCGCttttttt                                                                                                                                      <  2:839128/140‑1 (MQ=21)       gcgTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCCGTTTCCTGGCCCGCttgtttc                                                                                                                                      >  1:368490/1‑142 (MQ=255)       gcgTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGAGTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGGCTGGAGCGGGTCAGGTGACTGGGCCGCtttgctt                                                                                                                                      >  1:802679/1‑139 (MQ=18)       gcgTGAACGCCTTATCCGGCCTACAAAAACATACAAATTCAATAGATTGCAGAGATTCTGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGGTTACTGGCCCGCtgttgtt                                                                                                                                      >  2:490995/1‑143 (MQ=21)         gTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTCCTCAGTCTCGAGCTGGCCAGTTTACTAGCCCGCTTATTTTAt                                                                                                                                    >  1:364863/1‑143 (MQ=21)            aaCGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCGATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCACGCTTTTTTTATGCg                                                                                                                                 >  1:414162/1‑143 (MQ=255)            aaCGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCTCGCTTTTTTGATGCg                                                                                                                                 >  1:541643/1‑143 (MQ=255)               gCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGtta                                                                                                                              <  2:697176/143‑1 (MQ=255)                 cTTATCCGGCCTACAAAACCATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCAGCAC‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGCCAGTAAACTGACCCGCTcgagactgattacaaa                                                                                                                            <  2:472863‑M1/143‑17 (MQ=255)                     cccGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTg                                                                                                                        <  1:345987/142‑1 (MQ=255)                      ccGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAGGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGc                                                                                                                       <  2:570588/143‑1 (MQ=255)                       cctgcTACAAAAGCGTGCATATTCGATAGCCTGCAGGGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATTAGTCTCGAGCGGGTTAGGTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCt                                                                                                                      <  2:892128/139‑1 (MQ=25)                         gCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGa                                                                                                                    >  1:689310/1‑143 (MQ=255)                            tACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTCTTTTATCCGTTAGTGTTgacgcagt                                                                                                                 >  2:906373/1‑136 (MQ=25)                               aagaaCCTGCAAGTGCACCAGATGGCAGAGATTATGTAGGCCGGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGTGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCt                                                                                                              <  2:225742/140‑1 (MQ=37)                               aaaaaCATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCt                                                                                                              >  1:862710/1‑143 (MQ=255)                                 aaaCATGCAAATTCAATAGATTGCAGAGCTTATGTAGGCGTGATAAGCGAAGCGAATCAG‑GCAATTTGGCGGTTGTAATCGGTCTCGAGCGGCTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATGGCTGAAGTGCGTa                                                                                                            >  2:823885/1‑143 (MQ=25)                                 aaaCATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAAGTATGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTAGGCGGTATTATTGCTGAAGTGcgca                                                                                                            >  1:97305/1‑140 (MQ=37)                                 aaaCATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGAGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCCGGTCAGTTGACTGGCCCGCTGTTTTTATGCGTTAGTATTGGTGAAGAGCTTa                                                                                                            >  2:64582/1‑143 (MQ=37)                                  aaCATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTAAAGTTCTTaa                                                                                                           <  2:382208/143‑1 (MQ=255)                                   aCATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAAt                                                                                                          <  1:187375/143‑1 (MQ=255)                                        cAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCaa                                                                                                     <  1:323072/143‑1 (MQ=255)                                             tcaagggATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAatcat                                                                                                <  2:114834/137‑1 (MQ=255)                                              cAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAAGCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAatcatc                                                                                               >  1:116659/1‑143 (MQ=255)                                              aaaTATATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGTCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAatcatc                                                                                               <  1:556935/142‑1 (MQ=255)                                                ttAGATTGCAGAGATTTTGTAGGCCTGATATGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTTGAGTGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCaa                                                                                             <  2:321403/142‑1 (MQ=255)                                                 tAGTTTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAAt                                                                                            <  1:32750/143‑1 (MQ=255)                                                 tAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAAt                                                                                            <  2:249838/143‑1 (MQ=255)                                                 tAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAAt                                                                                            <  1:676472/143‑1 (MQ=255)                                                         agagATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTCATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAg                                                                                    <  1:302372/143‑1 (MQ=255)                                                             aggaTGTAGGCCGGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTg                                                                                <  1:797818/140‑1 (MQ=255)                                                              ttATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTGTTATTGCTGAAGTGCTTAAAGCCAAATCATCAATGCAATCAGACTGa                                                                               >  1:548451/1‑143 (MQ=255)                                                               tATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGac                                                                              <  2:840092/143‑1 (MQ=255)                                                                   tAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGaccacc                                                                          >  1:114133/1‑143 (MQ=255)                                                                       ccggATAAGCGTAGCGCATCCG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGAccaccacca                                                                      <  1:496853/140‑1 (MQ=255)                                                                       ccTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGAccaccacca                                                                      <  1:801341/143‑1 (MQ=255)                                                                       ccTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGAccaccacca                                                                      <  1:237233/143‑1 (MQ=255)                                                                         tGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGa                                                                    <  1:99112/143‑1 (MQ=255)                                                                          gATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGAc                                                                   <  1:180985/143‑1 (MQ=255)                                                                              aGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGATTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTACTGCCAAATCATCAATGCAATCAGGCTGACCACAACCAGACcaca                                                               >  2:593162/1‑143 (MQ=255)                                                                                  tAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGGTTACTGGCCCGCTTTTTTTCTGCGGTATTATTGCTGGAGTGCTTAATGCCACATCATCAATGCGATCAGGCGGACCACCACCAGACCACACaaa                                                           >  2:607512/1‑142 (MQ=255)                                                                                   aGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTCTACGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATg                                                          <  2:342458/143‑1 (MQ=255)                                                                                         tCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTgg                                                    >  1:532873/1‑143 (MQ=255)                                                                                           aG‑GCAATTTTGCGTTTGTAATCAGGCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTc                                                  <  2:862710/143‑1 (MQ=255)                                                                                               cAAGTTTGCGTTGGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGa                                               <  1:573090/143‑1 (MQ=255)                                                                                                   tttGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTCTTATTGCACTTGTTCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATaa                                           <  1:217607/143‑1 (MQ=255)                                                                                                       cGTTTGTAATCAGTCTCGGGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTg                                       <  2:308629/143‑1 (MQ=255)                                                                                                       cGTTTGTAATCAGTCTCGAGCGGGTCAGTTGACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTg                                       <  2:858500/143‑1 (MQ=255)                                                                                                       cGTGTGTTATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTGTTTATGCGTTATTATTGCTGAAGTGCGTAACTCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAGTGCGCTGGTCAGAATAAACTg                                       <  2:582244/143‑1 (MQ=255)                                                                                                        gTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAACTCATCAATTCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGc                                      <  1:176250/143‑1 (MQ=255)                                                                                                        gTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGc                                      >  1:148622/1‑143 (MQ=255)                                                                                                        gTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGc                                      >  1:188374/1‑143 (MQ=255)                                                                                                        gTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTCTTTTTATGCGTTATTATTGCTCAAGTGCTTAATGCAAAAAAAAAAAAAAAAAAAGGCTGAACACTACCAGACCACACAATGCGCTGGAAAGAAGAAAATGc                                      >  1:367173/1‑143 (MQ=255)                                                                                                            gTAATCAGTCTCGAGCGTGTCAGTTGACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGAc                                  <  2:905002/143‑1 (MQ=255)                                                                                                            gTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGAc                                  >  1:764263/1‑143 (MQ=255)                                                                                                                tCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCAc                              <  1:166593/143‑1 (MQ=255)                                                                                                                 cAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTcgagactgattacaaacgcaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctat                                                                    >  2:565061‑M1/1‑32 (MQ=255)                                                                                                                 cAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTcgagactgattacaaacgcaaaattgcctgatgcgctacgcttatcaggcctacataatctctgcaatctat                                                                    <  1:565061‑M1/104‑73 (MQ=255)                                                                                                                 cAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCAcc                             >  1:552200/1‑143 (MQ=255)                                                                                                                    tctcGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCACCCGc                          <  2:140215/143‑1 (MQ=255)                                                                                                                     ctcGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGGTGTTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCGGGCTGACCACCACCAGACCACACAATACGCAGGTCAGCATCAACGGCCGAGGCAcaaact                         >  2:798362/1‑138 (MQ=255)                                                                                                                            gggTCAGTTTACTGGCCCGC‑TTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCACCCGCTCACCgcgg                 >  1:669884/1‑143 (MQ=255)                                                                                                                                    ttACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCTGACGCACCCGCTCACAGCGGCGAATaa          <  1:486140/143‑1 (MQ=255)                                                                                                                                      aCTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCACCCGCTCACAGCGGCGAATAAAt        <  1:929447/143‑1 (MQ=255)                                                                                                                                       cTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCACCCGCTCACAGCGGCGAATAAAtt       <  2:942418/143‑1 (MQ=255)                                                                                                                                        tcgCCGGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTCATGCCAAATCATCAATGCAATCAGGCTGACTACCTCCAGACCACACGATGCGCTAGGCAGAATATGCCTTCGACGTACCCGCTCACAGCGGCGAATAAATtc      <  2:240162/141‑1 (MQ=255)                                                                                                                                        tGGCCCGCTTTTTTTATGCGTTCTTATTACTAAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCACCCGCTCACAGCGGCGAATAAATtc      <  1:586567/143‑1 (MQ=255)                                                                                                                                          gCCCGCTGTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAAGCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACCGCCGACGCACCCGCTCACAGCGGCGAATAAATtcat    <  1:607512/143‑1 (MQ=255)                                                                                                                                            ccGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCACCCGCTCACAGCGGCGAATAAATtcatca  >  1:597508/1‑143 (MQ=255)                                                                                                                                                |                                                                                                                                           GATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCAGAGATTATGTAGGCCTGATAAGCGTAGCGCATCAG‑GCAATTTTGCGTTTGTAATCAGTCTCGAGCGGGTCAGTTTACTGGCCCGCTTTTTTTATGCGTTATTATTGCTGAAGTGCTTAATGCCAAATCATCAATGCAATCAGGCTGACCACCACCAGACCACACAATGCGCTGGTCAGAATAAACTGCCGACGCACCCGCTCACAGCGGCGAATAAATTCATCA  >  NC_000913/3639213‑3639493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.