New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4289212	55 (1.160)	5 (0.110)	5/250	NT	8.5%	intergenic (+12/‑33)	nrfA/nrfB	cytochrome c552 nitrite reductase/periplasmic nitrite reductase penta‑heme c‑type cytochrome
	?	NC_000913	= 4289220	55 (1.230)					intergenic (+20/‑25)	nrfA/nrfB	cytochrome c552 nitrite reductase/periplasmic nitrite reductase penta‑heme c‑type cytochrome

CAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGCTA  >  NC_000913/4289071‑4289354                                                                                                                                              |                                                                                                                                               cAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCt                                                                                                                                               >  1:330262/1‑143 (MQ=255)  aaaGAGAAAGCCAAGCAGGCCATTGGCCAGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGAGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTc                                                                                                                                              >  2:623960/1‑143 (MQ=255)    atccaaaGCCCAGCAGCCCATTGGCCTTAACATGGAACACATCAAGGCCTAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGc                                                                                                                                            <  2:722899/139‑1 (MQ=255)        aaaGCCCAACAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGCTCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGACCGGTAAGCCAATAACCCCGTTCCGCCTCGCaacg                                                                                                                                        >  2:324393/1‑141 (MQ=255)            cccAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCCCGCCAAAAAAGTCTTTTTAGCCAATAACCCCGTTCCGCCTCGCAAGGggcg                                                                                                                                    <  1:298658‑M2/143‑5 (MQ=255)                gcagGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCccttgcgaggcggaac                                                                                                                                <  1:414982‑M1/143‑17 (MQ=255)                gcagGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGaaa                                                                                                                                <  1:527187/143‑1 (MQ=255)                  agGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCCATAACCCCGTTCCGCCccttgcgaggcggaacgg                                                                                                                              <  2:461053‑M1/143‑19 (MQ=255)                  agGCCAATGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAac                                                                                                                              >  1:344884/1‑143 (MQ=255)                  agGCCAATGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAac                                                                                                                              >  1:341214/1‑143 (MQ=255)                   ggCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCccttgcgaggcggaacggg                                                                                                                             <  2:144510‑M1/143‑20 (MQ=255)                    gCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGCACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAacac                                                                                                                            >  1:86560/1‑143 (MQ=255)                      cATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACaa                                                                                                                          >  2:435541/1‑143 (MQ=255)                              tGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGggcggaacggg                                                                                                                             >  2:926235‑M2/1‑121 (MQ=255)                              tGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGggcggaacggg                                                                                                                             <  1:926235‑M2/132‑12 (MQ=255)                               gAACATGGAACAAATCAAGGCCGAGACGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAAGGTCTGTAAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGaa                                                                                                                 >  1:791277/1‑143 (MQ=255)                               caaCATGGAACAAATCAAGCCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGCGAAGAACATGCACGTAAAAACGTTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGaa                                                                                                                 <  1:406616/142‑1 (MQ=255)                                aaacgggAACGAATCGAGGCCGAGAAGCAGGCCTTCATCAAAACGGGGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAat                                                                                                                <  2:902861/138‑1 (MQ=255)                                     ggAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGACGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATCACCCCGTTCCGCCTCGCCAGGGGCGGGCAACACAATGGCGTGAATCTgcg                                                                                                           >  1:157899/1‑141 (MQ=255)                                       aaCAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAACCACAATGGAGTGAATATGGGCg                                                                                                         >  2:562304/1‑143 (MQ=255)                                       aaCAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACACTGGAGGGAAGATGAGCg                                                                                                         >  1:797288/1‑143 (MQ=255)                                       aaCAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCg                                                                                                         >  1:626088/1‑143 (MQ=255)                                          aaaTCAAGGCCGAGAAGCAGGAGTAAAACAAAACGGAGATCCCGCAGTGGGCAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTAt                                                                                                      >  1:691510/1‑143 (MQ=255)                                          aaaTCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTAt                                                                                                      <  1:747733/143‑1 (MQ=255)                                           aaTCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGGGGATAGGAGCGTGtt                                                                                                     >  1:711033/1‑143 (MQ=255)                                            gttgaGGCCGAGAAGCAGGACTTCATCAAAACTGTGGTCGCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTa                                                                                                    <  2:238644/139‑1 (MQ=255)                                                 ggCCGAGAAGCAGGACTTCATCAAAGCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttc                                                                                               <  2:179603/143‑1 (MQ=255)                                                   ccGGGAGGCAGCACTGCAGCAAGACGGTGAGCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttcgt                                                                                             <  1:705731/143‑1 (MQ=255)                                                    cGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttcgtt                                                                                            >  1:350961/1‑143 (MQ=255)                                                           cAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGAGAATATGAGCGTATTACGTTCGTGATTAACt                                                                                     >  1:610937/1‑143 (MQ=255)                                                             ggACTTCATCAAAACGGTGATCCCGCAGTGGGACGAACACGGACGGAAAAACGGTCTGTTCTGTGATACGGTGCGCGCCACCCAGCTGGTGCCAGGTTAGCCAATGTAGTGAATATGAGCGTATTACGTTCGTTATTAACTGc                                                                                   <  1:691306/143‑1 (MQ=255)                                                                    atcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCggggag                                                                            >  2:405293/1‑141 (MQ=255)                                                                     tcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGc                                                                           >  1:101940/1‑143 (MQ=255)                                                                        aaaCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTgg                                                                        <  1:21941/143‑1 (MQ=255)                                                                        aaaCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGCGCTgg                                                                        >  2:120086/1‑143 (MQ=255)                                                                            ggTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTc                                                                    >  2:390070/1‑143 (MQ=255)                                                                               gaggccGCAGTGGGAAGAACAGGCACGGAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCggg                                                                 <  1:313596/139‑1 (MQ=255)                                                                               gATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTCTTAACTGCCGGGGTGCTGGCGTCggg                                                                 >  1:41115/1‑143 (MQ=255)                                                                                   ccGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtg                                                             >  2:894078/1‑143 (MQ=255)                                                                                       aGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtgttgt                                                         <  2:344884/143‑1 (MQ=255)                                                                                       aGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATCACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtgttgt                                                         <  2:341214/143‑1 (MQ=255)                                                                                          gggAAGACCAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCATGTTGTGGa                                                      <  2:163487/143‑1 (MQ=255)                                                                                            gaagaaCAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCccttgcgaggcgga                                                                                                                                  >  1:329053‑M1/1‑51 (MQ=255)                                                                                            gaagaaCAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCccttgcgaggcgga                                                                                                                                  <  2:329053‑M1/65‑15 (MQ=255)                                                                                               gaaCAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTCCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGAGTGCTGGCGTCGGGCCGGTTGAGGAGCCTg                                                 >  2:723357/1‑143 (MQ=255)                                                                                                aaCAGGCACGTAAAACCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCACGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGa                                                <  2:200058/143‑1 (MQ=255)                                                                                                      cACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGCTGTGGCGCCTGCACGGaa                                          >  1:356997/1‑143 (MQ=255)                                                                                                         gTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGCGCCTGAACGGACTTa                                       >  1:261706/1‑143 (MQ=255)                                                                                                          tAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGTAGCCTGAACGGAATTAc                                      >  2:905239/1‑143 (MQ=255)                                                                                                          tAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTGAAGGAGCCTGCACGGagtgac                                      >  1:583008/1‑138 (MQ=255)                                                                                                           aaaacCGGTCTGTTAAGCCAATAACCCCGTCCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCTTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTAcc                                     <  1:163193/143‑1 (MQ=255)                                                                                                           aaaaaCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTAcc                                     >  1:855118/1‑143 (MQ=255)                                                                                                             aaaCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGc                                   <  1:289065/143‑1 (MQ=255)                                                                                                                cGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTAc                                <  2:691510/143‑1 (MQ=255)                                                                                                                  gTCTGTTAAGCCAATAACCCCGTGCCGCCTCGCGAGGGGCGGTAAACAGCATGTAGTGGATATGAGCGTATTAGGTTCGTTATTAACTGCCGGCGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTAccc                              <  2:917656/143‑1 (MQ=255)                                                                                                                          aGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGCGTGAATATGAGCGCCTTACGCGCGTTCTTAACTGCCGGGGTGCTGCCGCCGGGCCTGCGGTGGAACCTGCACGGCACTACCTCTGCCCCTgccgac                      >  2:855621/1‑139 (MQ=255)                                                                                                                          aGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATCTGAGCGTATTACGGTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGGCTGTCCTGCAGCCTGAGCGGGATTAGCGACACCCCtcgcgcg                      >  2:852615/1‑137 (MQ=255)                                                                                                                           gCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACGGCTACACCTGCGgcgc                     >  1:770763/1‑143 (MQ=255)                                                                                                                           gCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGgcgc                     >  1:313193/1‑143 (MQ=255)                                                                                                                            ccacggaCCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAGTGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCa                    <  2:431070/137‑1 (MQ=255)                                                                                                                            ccAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTATGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGCTGTGGAGCCTGAACGGAATTACCGCGACCCCTGCGGCGCa                    >  2:413992/1‑143 (MQ=255)                                                                                                                                  aCCCCGCTCCGCCTCGCGAGGGGCGGAAAACACCGTGTGGTGAATATGAGCGTATTACGTTCGTTAGTAACTGGCGGGGTGCTGGCGTCTGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATc              <  1:434885/143‑1 (MQ=255)                                                                                                                                   ccccGTCCCGCCTCGCAGGGGGCGGAAAACACAACGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCt             <  1:874788/143‑1 (MQ=255)                                                                                                                                    cccGTTCCGCCccttgcgaggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttcccactgcgggatcaccgttttgatgaagtcctgcttctcggccttgatttgttccatgttca                       <  1:926235‑M1/132‑122 (MQ=255)                                                                                                                                    cccGTTCCGCCccttgcgaggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttcccactgcgggatcaccgttttgatgaagtcctgcttctcggccttgatttgttccatgttca                       >  2:926235‑M1/1‑11 (MQ=255)                                                                                                                                    cccGTTCCGCCTCGCAAGGggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttcccactgcgggatcaccgttttgatgaagtcctgcttctcggccttgatttgttccatgttcaggccaatggcc            <  2:144510‑M2/143‑125 (MQ=255)                                                                                                                                    cccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGGTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGGGGGGCCGGAACGGCATTACCGCTACCCCTGCGGCGGAGGctgctg            >  2:654687/1‑138 (MQ=255)                                                                                                                                     ccGTTCCGCCTCGCAAGGggcggaacggggttatgggcttaacagaccgtttttacgtgcctgttcttcccactgcgggatcaccgttttgatgaagtcctgcttctcggccttgatttgttccatgttcaggccaatggcct           <  2:461053‑M2/143‑126 (MQ=255)                                                                                                                                     ccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAGTTACCGCTGCCGCTGCGGGGGAGGCagccgg           >  1:477531/1‑138 (MQ=255)                                                                                                                                     ccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTCGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCACCtga           >  1:471075/1‑143 (MQ=255)                                                                                                                                       gTTCCGCCTCGCAAGGggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttcccactgcgggatcaccgttttgatgaagtcctgcttctcggccttgatttgttccatgttcaggccaatggcctgc         <  1:414982‑M2/143‑128 (MQ=255)                                                                                                                                         tCCGCCTCGCAAGGggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttc                                                                                     <  2:329053‑M2/65‑52 (MQ=255)                                                                                                                                         tCCGCCTCGCAAGGggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttc                                                                                     >  1:329053‑M2/1‑14 (MQ=255)                                                                                                                                           cGCCccttgcgaggcggaacggggttattggctaaaaagacttttttggcgggcctgttcttcccactgcgggatcaccgttttgatgaagtcctgcttctcggccttgatttgttccatgttcaggccaatggcctgctggg     <  1:298658‑M1/143‑140 (MQ=255)                                                                                                                                            gCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGCACGGCATTACCGCTCCCCCTGCGGCGCAGGCATCTGATGAgcgc    >  1:446840/1‑143 (MQ=255)                                                                                                                                            gCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGc    >  1:582757/1‑143 (MQ=255)                                                                                                                                             ccTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTCTTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTCCCCCTGCGGCGCAGGCATCTGATGATCGCt   >  1:897119/1‑143 (MQ=255)                                                                                                                                              cTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGCTa  <  1:158545/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                               CAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGCTA  >  NC_000913/4289071‑4289354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.