New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4289212	55 (1.160)	5 (0.110)	5/250	NT	8.5%	intergenic (+12/‑33)	nrfA/nrfB	cytochrome c552 nitrite reductase/periplasmic nitrite reductase penta‑heme c‑type cytochrome
	?	NC_000913	= 4289220	55 (1.230)					intergenic (+20/‑25)	nrfA/nrfB	cytochrome c552 nitrite reductase/periplasmic nitrite reductase penta‑heme c‑type cytochrome

CCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGCTACGAA  >  NC_000913/4289082‑4289358                                                                                                                                           |                                                                                                                                           cccAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCCCGCCAAAAAAGTCTTTTTAGCCAATAACCCCGTTCCGCCTCGCAAGGggcg                                                                                                                                        <  1:298658‑M2/143‑5 (MQ=255)     gcagGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGaaa                                                                                                                                    <  1:527187/143‑1 (MQ=255)       agGCCAATGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAac                                                                                                                                  >  1:344884/1‑143 (MQ=255)       agGCCAATGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAac                                                                                                                                  >  1:341214/1‑143 (MQ=255)         gCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGCACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAacac                                                                                                                                >  1:86560/1‑143 (MQ=255)           cATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACaa                                                                                                                              >  2:435541/1‑143 (MQ=255)                   tGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGggcggaacggg                                                                                                                                 >  2:926235‑M2/1‑121 (MQ=255)                   tGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGggcggaacggg                                                                                                                                 <  1:926235‑M2/132‑12 (MQ=255)                    gAACATGGAACAAATCAAGGCCGAGACGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAAAGGTCTGTAAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGaa                                                                                                                     >  1:791277/1‑143 (MQ=255)                    caaCATGGAACAAATCAAGCCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGCGAAGAACATGCACGTAAAAACGTTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGaa                                                                                                                     <  1:406616/142‑1 (MQ=255)                     aaacgggAACGAATCGAGGCCGAGAAGCAGGCCTTCATCAAAACGGGGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAat                                                                                                                    <  2:902861/138‑1 (MQ=255)                          ggAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGACGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATCACCCCGTTCCGCCTCGCCAGGGGCGGGCAACACAATGGCGTGAATCTgcg                                                                                                               >  1:157899/1‑141 (MQ=255)                            aaCAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAACCACAATGGAGTGAATATGGGCg                                                                                                             >  2:562304/1‑143 (MQ=255)                            aaCAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACACTGGAGGGAAGATGAGCg                                                                                                             >  1:797288/1‑143 (MQ=255)                            aaCAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCg                                                                                                             >  1:626088/1‑143 (MQ=255)                               aaaTCAAGGCCGAGAAGCAGGAGTAAAACAAAACGGAGATCCCGCAGTGGGCAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTAt                                                                                                          >  1:691510/1‑143 (MQ=255)                               aaaTCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTAt                                                                                                          <  1:747733/143‑1 (MQ=255)                                aaTCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGGGGATAGGAGCGTGtt                                                                                                         >  1:711033/1‑143 (MQ=255)                                 gttgaGGCCGAGAAGCAGGACTTCATCAAAACTGTGGTCGCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTa                                                                                                        <  2:238644/139‑1 (MQ=255)                                      ggCCGAGAAGCAGGACTTCATCAAAGCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttc                                                                                                   <  2:179603/143‑1 (MQ=255)                                        ccGGGAGGCAGCACTGCAGCAAGACGGTGAGCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttcgt                                                                                                 <  1:705731/143‑1 (MQ=255)                                         cGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttcgtt                                                                                                >  1:350961/1‑143 (MQ=255)                                                cAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGAGAATATGAGCGTATTACGTTCGTGATTAACt                                                                                         >  1:610937/1‑143 (MQ=255)                                                  ggACTTCATCAAAACGGTGATCCCGCAGTGGGACGAACACGGACGGAAAAACGGTCTGTTCTGTGATACGGTGCGCGCCACCCAGCTGGTGCCAGGTTAGCCAATGTAGTGAATATGAGCGTATTACGTTCGTTATTAACTGc                                                                                       <  1:691306/143‑1 (MQ=255)                                                         atcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCggggag                                                                                >  2:405293/1‑141 (MQ=255)                                                          tcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGc                                                                               >  1:101940/1‑143 (MQ=255)                                                             aaaCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTgg                                                                            <  1:21941/143‑1 (MQ=255)                                                             aaaCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGCGCTgg                                                                            >  2:120086/1‑143 (MQ=255)                                                                 ggTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTc                                                                        >  2:390070/1‑143 (MQ=255)                                                                    gaggccGCAGTGGGAAGAACAGGCACGGAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCggg                                                                     <  1:313596/139‑1 (MQ=255)                                                                    gATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTCTTAACTGCCGGGGTGCTGGCGTCggg                                                                     >  1:41115/1‑143 (MQ=255)                                                                        ccGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtg                                                                 >  2:894078/1‑143 (MQ=255)                                                                            aGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtgttgt                                                             <  2:344884/143‑1 (MQ=255)                                                                            aGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATCACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtgttgt                                                             <  2:341214/143‑1 (MQ=255)                                                                               gggAAGACCAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCATGTTGTGGa                                                          <  2:163487/143‑1 (MQ=255)                                                                                    gaaCAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTCCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGAGTGCTGGCGTCGGGCCGGTTGAGGAGCCTg                                                     >  2:723357/1‑143 (MQ=255)                                                                                     aaCAGGCACGTAAAACCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCACGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGa                                                    <  2:200058/143‑1 (MQ=255)                                                                                           cACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGCTGTGGCGCCTGCACGGaa                                              >  1:356997/1‑143 (MQ=255)                                                                                              gTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGCGCCTGAACGGACTTa                                           >  1:261706/1‑143 (MQ=255)                                                                                               tAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGTAGCCTGAACGGAATTAc                                          >  2:905239/1‑143 (MQ=255)                                                                                               tAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTGAAGGAGCCTGCACGGagtgac                                          >  1:583008/1‑138 (MQ=255)                                                                                                aaaacCGGTCTGTTAAGCCAATAACCCCGTCCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCTTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTAcc                                         <  1:163193/143‑1 (MQ=255)                                                                                                aaaaaCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTAcc                                         >  1:855118/1‑143 (MQ=255)                                                                                                  aaaCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGc                                       <  1:289065/143‑1 (MQ=255)                                                                                                     cGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTAc                                    <  2:691510/143‑1 (MQ=255)                                                                                                       gTCTGTTAAGCCAATAACCCCGTGCCGCCTCGCGAGGGGCGGTAAACAGCATGTAGTGGATATGAGCGTATTAGGTTCGTTATTAACTGCCGGCGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTAccc                                  <  2:917656/143‑1 (MQ=255)                                                                                                               aGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGCGTGAATATGAGCGCCTTACGCGCGTTCTTAACTGCCGGGGTGCTGCCGCCGGGCCTGCGGTGGAACCTGCACGGCACTACCTCTGCCCCTgccgac                          >  2:855621/1‑139 (MQ=255)                                                                                                               aGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATCTGAGCGTATTACGGTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGGCTGTCCTGCAGCCTGAGCGGGATTAGCGACACCCCtcgcgcg                          >  2:852615/1‑137 (MQ=255)                                                                                                                gCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACGGCTACACCTGCGgcgc                         >  1:770763/1‑143 (MQ=255)                                                                                                                gCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGgcgc                         >  1:313193/1‑143 (MQ=255)                                                                                                                 ccacggaCCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAGTGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCa                        <  2:431070/137‑1 (MQ=255)                                                                                                                 ccAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTATGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGCTGTGGAGCCTGAACGGAATTACCGCGACCCCTGCGGCGCa                        >  2:413992/1‑143 (MQ=255)                                                                                                                       aCCCCGCTCCGCCTCGCGAGGGGCGGAAAACACCGTGTGGTGAATATGAGCGTATTACGTTCGTTAGTAACTGGCGGGGTGCTGGCGTCTGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATc                  <  1:434885/143‑1 (MQ=255)                                                                                                                        ccccGTCCCGCCTCGCAGGGGGCGGAAAACACAACGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCt                 <  1:874788/143‑1 (MQ=255)                                                                                                                         cccGTTCCGCCTCGCAAGGggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttcccactgcgggatcaccgttttgatgaagtcctgcttctcggccttgatttgttccatgttcaggccaatggcc                <  2:144510‑M2/143‑125 (MQ=255)                                                                                                                         cccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGGTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGGGGGGCCGGAACGGCATTACCGCTACCCCTGCGGCGGAGGctgctg                >  2:654687/1‑138 (MQ=255)                                                                                                                          ccGTTCCGCCTCGCAAGGggcggaacggggttatgggcttaacagaccgtttttacgtgcctgttcttcccactgcgggatcaccgttttgatgaagtcctgcttctcggccttgatttgttccatgttcaggccaatggcct               <  2:461053‑M2/143‑126 (MQ=255)                                                                                                                          ccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAGTTACCGCTGCCGCTGCGGGGGAGGCagccgg               >  1:477531/1‑138 (MQ=255)                                                                                                                          ccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTCGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCACCtga               >  1:471075/1‑143 (MQ=255)                                                                                                                            gTTCCGCCTCGCAAGGggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttcccactgcgggatcaccgttttgatgaagtcctgcttctcggccttgatttgttccatgttcaggccaatggcctgc             <  1:414982‑M2/143‑128 (MQ=255)                                                                                                                              tCCGCCTCGCAAGGggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttc                                                                                         >  1:329053‑M2/1‑14 (MQ=255)                                                                                                                              tCCGCCTCGCAAGGggcggaacggggttattggcttaacagaccgtttttacgtgcctgttcttc                                                                                         <  2:329053‑M2/65‑52 (MQ=255)                                                                                                                                 gCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGCACGGCATTACCGCTCCCCCTGCGGCGCAGGCATCTGATGAgcgc        >  1:446840/1‑143 (MQ=255)                                                                                                                                 gCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGc        >  1:582757/1‑143 (MQ=255)                                                                                                                                  ccTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTCTTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTCCCCCTGCGGCGCAGGCATCTGATGATCGCt       >  1:897119/1‑143 (MQ=255)                                                                                                                                   cTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGCTa      <  1:158545/143‑1 (MQ=255)                                                                                                                                     cGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCACTACACCTGAGGCGCAGGCAGATGATGATAGCTAct    >  1:180692/1‑142 (MQ=255)                                                                                                                                       cAAGGTGCGGAAAACACAATGGAGCGGGTATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGCTACGaa  <  2:610937/143‑1 (MQ=255)                                                                                                                                           |                                                                                                                                           CCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGCTACGAA  >  NC_000913/4289082‑4289358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.