mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1212469 | 63 (1.330) | 3 (0.070) | 3/254 | NT | 4.5% | intergenic (‑165/+71) | ymgK/ymgL | protein YmgK/protein YmgL |
| ? | NC_000913 | = 1212482 | 66 (1.450) | intergenic (‑178/+58) | ymgK/ymgL | protein YmgK/protein YmgL | |||||
| * | ? | NC_000913 | 572405 = | 858 (18.130) | 11 (0.300) +31 bp |
8/202 | NT | 1.7% | coding (38/102 nt) | ylcH | DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | = 1095504 | NA (NA) | intergenic (‑67/‑40) | insE‑4/ymdE | IS3 element protein InsE/protein YmdE | |||||
| * | ? | NC_000913 | 572316 = | 2356 (49.780) | 20 (0.460) | 8/244 | NT | 0.98% | intergenic (+65/‑52) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH |
| ? | NC_000913 | 572345 = | 1847 (42.250) | intergenic (+94/‑23) | ybcM/ylcH | DLP12 prophage; putative DNA‑binding transcriptional regulator/DLP12 prophage; uncharacterized protein YlcH | |||||
| * | ? | NC_000913 | 570695 = | 2019 (42.660) | 45 (1.000) | 19/250 | NT | 2.4% | intergenic (+267/‑198) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570719 = | 1768 (39.470) | intergenic (+291/‑174) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | = 570639 | 2131 (45.030) | 7 (0.160) | 7/238 | NT | 0.36% | intergenic (+211/‑254) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | = 570663 | 2008 (47.110) | intergenic (+235/‑230) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | 570627 = | 2103 (44.440) | 14 (0.330) | 9/238 | NT | 0.71% | intergenic (+199/‑266) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL |
| ? | NC_000913 | 570677 = | 2008 (47.110) | intergenic (+249/‑216) | ybcK/ybcL | DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL | |||||
| * | ? | NC_000913 | = 569159 | 2149 (45.410) | 49 (1.130) | 16/242 | NT | 2.4% | coding (258/1527 nt) | ybcK | DLP12 prophage; putative recombinase |
| ? | NC_000913 | = 569161 | 2097 (48.370) | coding (260/1527 nt) | ybcK | DLP12 prophage; putative recombinase | |||||
| * | ? | NC_000913 | 569054 = | 2223 (46.970) | 6 (0.130) | 5/258 | NT | 0.28% | coding (153/1527 nt) | ybcK | DLP12 prophage; putative recombinase |
| ? | NC_000913 | 569072 = | 2120 (45.850) | coding (171/1527 nt) | ybcK | DLP12 prophage; putative recombinase | |||||
| * | ? | NC_000913 | 568678 = | 2507 (52.970) | 17 (0.380) | 11/250 | NT | 0.72% | intergenic (+31/‑17) | emrE/ylcJ | multidrug/betaine/choline efflux transporter EmrE/protein YlcJ |
| ? | NC_000913 | 568704 = | 2307 (51.500) | coding (10/150 nt) | ylcJ | protein YlcJ | |||||
| * | ? | NC_000913 | 568559 = | 2323 (49.090) | 75 (1.660) | 18/252 | NT | 3.3% | coding (245/333 nt) | emrE | multidrug/betaine/choline efflux transporter EmrE |
| ? | NC_000913 | 568576 = | 2178 (48.230) | coding (262/333 nt) | emrE | multidrug/betaine/choline efflux transporter EmrE | |||||