| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 566777 = | NA (NA) | 2387 (40.310) | 263/278 | 0.0 | 97.1% | noncoding (1/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | = 572471 | 71 (1.190) | coding (6/456 nt) | ybcN | DLP12 prophage; DNA base‑flipping protein | |||||
Only 100 of 2507 total aligned reads displayed.
GAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCA > NC_000913/572329‑572612 | gAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCACACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACATCTGCGGAGGGGAAGCTTGCAc > 2:19848/1‑143 (MQ=255) aacaacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCATCACAGATGCAGAAATGCACCTGCAATAATTTGTATAATTCGCTCGACCTCTGCGGAGGAGAAGCGGGAACa < 2:785356‑M2/143‑2 (MQ=255) acaacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtg > 1:873524‑M2/1‑141 (MQ=255) aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgat > 2:760917‑M2/1‑139 (MQ=255) aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgat > 1:853680‑M2/1‑139 (MQ=255) aacTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgat > 1:734616‑M2/1‑139 (MQ=255) tCCGGTGGCTTCTGCGCTAAACAGAGCCGGAAAGTTCCGCATACTATCCAGACTCTCTTCTCCCTTCACAGATCCAGAAATGCCCCTGCAATTCTTTGCATCTAGCGTCTGCCCTCTACGGAGGGGCAGCATGCActgatcgt > 2:1094115/1‑136 (MQ=255) tCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatctt < 1:412806‑M2/143‑8 (MQ=255) ccGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatctta < 1:771746‑M2/143‑9 (MQ=255) tGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAGCCCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttaccca > 1:808619‑M2/1‑131 (MQ=255) gACTGCTGCGCTCAACGGGGACGTTTATGCGCACATACAATCCAACCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATCCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccag > 1:282866‑M2/1‑130 (MQ=255) ttCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaa > 1:1039050‑M2/1‑127 (MQ=255) ttCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAAGTCTTTGCATCTAGCGTTTGACCTCTCCGGAGGGTGAGCGTGCACtgatcttacccagcaa < 2:426882‑M2/143‑17 (MQ=255) ttCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGAACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaa < 1:449634‑M2/143‑17 (MQ=255) cTGCGCTAAACGGGGACGTTGAGGCGCACATACAAGCCGAACCTTCTCCTCCCTTCACAGATGCAGAAATGCACCGGCAATTCTTTGGAACTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaata > 1:471581‑M2/1‑125 (MQ=255) cTGCGCTAAACGGGGACGGTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaata > 1:981506‑M2/1‑125 (MQ=255) tGCGCTAAACGGGGACGTTTATGCGCACATACAATCCACACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatag > 2:574990‑M2/1‑124 (MQ=255) gcgcTAAACGGGGACGTTTAGGCGCACATACAATCCACACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagt > 1:179235‑M2/1‑123 (MQ=255) cgcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATTCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGAAGCGGAAGCGTGAACCTATCACAAGACGGCATCaaa > 1:526052/1‑143 (MQ=255) cgcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtg > 1:788661‑M2/1‑122 (MQ=255) cTCAACGGGGGCGTTTATGGCCACATACAATCCGAACTCTCTTCTCCCTTCACCGATGCATAAATGCACCTGCGATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgga > 2:953276‑M2/1‑120 (MQ=255) cTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgga > 1:828184‑M2/1‑120 (MQ=255) cTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGCTTGACCTCTGCGGAGGGGCAGCGTGAACtgatcttacacaccactggtgga < 2:1045657‑M2/143‑24 (MQ=255) cTAAACGGGAACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCGCAGATGCAGAAAAGCACGTGCAATTCTTTGCATCTAGCGTTTGGCCTCTGCGGAGGGGAAGCGTCAGCggggcttacccagcaatagtgga < 2:557178‑M2/143‑24 (MQ=255) gggACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcgg > 1:211632‑M2/1‑113 (MQ=255) gggACGTGTATGCGCACATACAATCCCAACTCTCTACCCCCCTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTCGACCTCTGCGGAGGGTAAGCGTGAACtgatcttacccagcaatagtggacacgcgg > 1:890019‑M2/1‑113 (MQ=255) gggACGTCTAGTCGCACATACACTCCGCTCGCTCTTCTCCCGTCACAGAGGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcgg > 2:98001‑M2/1‑113 (MQ=255) gTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaa < 2:935763‑M2/142‑35 (MQ=255) tttATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGCGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagt < 1:112275‑M2/143‑37 (MQ=255) tGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCACCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggaaacgaggctaagtgaga < 2:152939‑M2/143‑41 (MQ=255) gcgcACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagta < 1:566781‑M2/143‑42 (MQ=255) gcACATGCAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCAGCAAGCGTATCTCGTCTGCGGGGGGGCAGCGTGAACtgatcttacccagcaatagtagatacgcggctaactgagtaaa < 2:334326‑M2/143‑44 (MQ=255) gcACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAATTGCACCGGCCATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccctcactagtggccacgcggctaagtgagtaaa < 1:679989‑M2/143‑44 (MQ=255) gacatACAATCCAAACTCTCTTCTCCCTGCACAGATGCCGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgaacacgcggctaagtgagtaaac > 1:63206‑M2/2‑99 (MQ=255) aCAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca > 2:713628‑M2/1‑94 (MQ=255) cAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTGGCATCTAGCGTTTGCCCTCAGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaggtgaggaaactctcag < 1:1015262‑M2/143‑51 (MQ=255) cAAGCCCAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcag > 2:36322‑M2/1‑93 (MQ=255) aaTCCAAACTCTCTTCTCACTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACATCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagaggacatgcggataagtaaataaactctcatt < 2:507588‑M2/143‑52 (MQ=255) tCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggcgaagtgagccaactctcagtca < 2:218852‑M2/143‑54 (MQ=255) tCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgaggctaagtgagtaaacccccagtcg < 1:507163‑M2/143‑54 (MQ=255) ccAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtaag < 1:940319‑M2/143‑55 (MQ=255) cAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACTTGCAATGCTTTGGATCTAGCGTTTGACCTCTGCGGAGGTGCAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCAGCAACTTCACCGCTATCGGTCGGc > 1:263334/1‑143 (MQ=255) cAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggccacgcgcctaagtgagttaactctcagtcaga < 1:298018‑M2/143‑56 (MQ=255) tttctctcttccCCCTGTCCAGATGCAGAAATGCACCTTCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag > 2:666296‑M2/4‑87 (MQ=255) catctctcttctCCCTACACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag > 1:315567‑M2/4‑87 (MQ=255) aaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGAGGAAGCGGGAACtgatctgacccagcactagtggacacgcggccaagtgaggaaactcgcagccggcgg < 2:595232‑M2/143‑58 (MQ=255) gctcttCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtga > 1:437053‑M2/2‑83 (MQ=255) tctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAGCtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac > 1:1000220‑M2/1‑78 (MQ=255) tctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac > 1:1057773‑M2/1‑78 (MQ=255) ctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCCTCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtgaactctcagtcagaggtgactcgca < 1:959740‑M2/143‑67 (MQ=255) ctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcaca > 2:696503‑M2/1‑77 (MQ=255) tcCGTTCACCGATGCACAAATGCACCTGTAATTTTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtgtacacgcggctaagtgagtaaactctcagtcagaggtgactcacat > 2:178126‑M2/1‑76 (MQ=255) ccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtagactctcagtcagcggtgactcacttgt < 1:371481‑M2/143‑70 (MQ=255) tCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaa > 1:715755‑M2/1‑71 (MQ=255) tCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagt < 1:1069278‑M2/91‑21 (MQ=255) cacaGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaa > 2:734765‑M2/1‑70 (MQ=255) cacaGATGCAGAAATGCACCTGCAATGCTTTGCAGCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACggatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaa > 1:239227‑M2/1‑70 (MQ=255) acaGGTGCAGAAATGAACCTGCAATCCTTGGCATCTAGCGTTTGACCCCTGCGGAAGGGAAGCGTGAACtgagcttacccagcaatagtggacacgcggctaagtgagtatactctcaatcagaggtgactcacatgacaaaa > 2:914916‑M2/1‑69 (MQ=255) caGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatgttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggcgactcacatgacaaaac < 1:907069‑M2/143‑76 (MQ=255) caGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccag > 2:845191‑M2/1‑68 (MQ=255) aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagcggtcactcacatgacaaaaac < 1:699904‑M2/143‑77 (MQ=255) aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaac > 1:648803‑M2/1‑67 (MQ=255) gATGCAGAAATGAACCGGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaaca > 2:618682‑M2/1‑66 (MQ=255) gCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtcatcttacccagcaatagtggacacgcggctaagtgagtcaactctcagtcagaggtgactcccatgacaaaaacagta < 2:316929‑M2/143‑81 (MQ=255) cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGACGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcaggaagaggtgactcacatgagaaaaacagtat < 2:246299‑M2/143‑82 (MQ=255) aaaTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctca < 2:293650‑M2/108‑50 (MQ=255) aaTGCACCTGCGATTCTTTGGAGCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtggtcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaac > 2:1020701‑M2/1‑58 (MQ=255) aaTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaac > 2:476142‑M2/1‑58 (MQ=255) tGCACGTGCAATTCCTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaacca > 2:130366‑M2/1‑56 (MQ=255) agctgCAATCCTTTGCATCTAGCGCTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagta > 1:194447‑M2/3‑53 (MQ=255) ccGGCAATTCCTTGCAGCTAGCGTTTGTCCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatcgtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaa > 1:612848‑M2/1‑52 (MQ=255) tGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaa < 2:827315‑M2/143‑94 (MQ=255) tGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGAGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggcggctgacgtgacaaaatcagtagcaacaagtgact < 1:750518‑M2/143‑94 (MQ=255) gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaa < 1:547684‑M2/143‑95 (MQ=255) gCAAGTCTTTGCATCTAGCGTTTGACCTCGGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaa > 1:924717‑M2/1‑49 (MQ=255) aTTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacc > 2:452040‑M2/1‑46 (MQ=255) aTTCTTCGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacc > 1:490098‑M2/1‑46 (MQ=255) tCTGTGCAGCTAGCGGGTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaacacacccc > 2:806674‑M2/1‑44 (MQ=255) tttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAC < 1:356600‑M2/42‑1 (MQ=255) ttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgta < 2:890016‑M2/143‑103 (MQ=255) ttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgta < 1:1096937‑M2/143‑103 (MQ=255) cTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagc < 1:66871‑M2/143‑109 (MQ=255) aGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaagctgtcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaagaaaccccgtaaacagcat < 1:998720‑M2/143‑111 (MQ=255) aCCTCTGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctga > 1:333630‑M2/1‑25 (MQ=255) ctctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaat < 1:1086548‑M2/143‑121 (MQ=255) tctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatt > 1:16102‑M2/1‑22 (MQ=255) ctGCGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcaggcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaattt > 1:390127‑M2/1‑21 (MQ=255) ggcGGAGGGGAAGCGTGAACtgaccttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttc > 1:222749‑M2/2‑20 (MQ=255) gCGGAGGGGACGCGTGAACggttcttacccggcaagagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcg > 2:269767‑M2/1‑19 (MQ=255) cGGAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgacgcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgc < 1:587038‑M2/143‑126 (MQ=255) ggAGGGGAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgca > 2:6396‑M2/1‑17 (MQ=255) ggggAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtg > 1:127162‑M2/1‑14 (MQ=255) ggAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaa > 2:1064072‑M2/1‑12 (MQ=255) gAAGCGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaag > 1:141879‑M2/1‑11 (MQ=255) cGTGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatatcccagtgaagccgg < 2:1112639‑M2/143‑137 (MQ=255) tGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctga < 1:424680‑M2/143‑139 (MQ=255) tGAACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagccagaggtgactcacatgacaaaaacagtatccaccagtaaaaaaacacgtaaacagcattcgcctgaaactcgcagtgaagccctga < 2:401705‑M2/143‑139 (MQ=255) tGAACtgatcttacccagcaatagtggacacgcggctaagggagtaaacactcagtgagaggtgactcacatgacaaaaacagaaacaacaagaaaaaaaccccgtaaacagcatacgaaaaaatttcgcagtgaagcgctga < 2:86916‑M2/143‑139 (MQ=255) gAACtgatcttacccagcaatagtggacacgcggctaagtgagcaaactctcagtcagaggtgactcacatgaccaaaacagtatcaaccagtaaaaaaccccgtaaacagcctgcgcctgaatgtcgcagtgaagccccgaa < 2:533513‑M2/143‑140 (MQ=255) aCtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcagtcgcctgaatttcgccgtgaagccctgaagc < 2:382644‑M2/143‑142 (MQ=255) | GAACAACTCCGGTGACTTCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTCGCATGGTGCTTAAACCGTGGCGTGAGAAACGCAGTCTTTCCCAGAATGCA > NC_000913/572329‑572612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |