New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2231075 | 87 (0.910) | 6 (0.070) | 6/260 | NT | 6.4% | coding (57/696 nt) | yohK | PF04712 family membrane protein YohK |
? | NC_000913 | = 2231083 | 92 (1.020) | coding (65/696 nt) | yohK | PF04712 family membrane protein YohK |
CTGTGCAGTCAGTACGCTGGTGGTTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2230920‑2231075 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgccAGTTTGCGGGCGGCAAAAAAGACAATCAATGTCAGCGGTAATGACCACCAGATATTCGCCATCATTCTTCTGATCCTTTCTGACCTACGACTTTACGTTCACCGTGTACCAGTTGCGAACTCCAGCTCACCACCAGAAAAACCACCAGC < NC_000913/2231083‑2230935 CTGTGCAGTCAGTACGCTGGTGGTTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTT > 2:771976/1‑150 TGTGCAGTCAGTACGCTGGTGGTTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTG > 1:697846/1‑150 TGTGCAGTCAGTACGCTGGTGGTTTTTCTGGTGGGGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTG < 2:989104/150‑1 TGCAGTCAGTACGCTGGTGGTTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCC < 1:853617/150‑1 GCAGTCAGTACGCTGGTGGTTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGACATTACCGCTGACATTGATTGTCTTTTTTGCCG > 2:1119846/1‑150 AGTCAGTACGCTGGTGGTTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCC > 2:1633985/1‑150 TTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCCAGTTTGCGGGCGGCAAA < 1:1128351/150‑1 TTTCTGGTGGGGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCCAGTTTGCGGGCGGCAAAAA < 1:66562/150‑1 AGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCCAGTTTGCGGGCGGCAAAAAAGACAATCAATG < 1:664741/150‑1 AGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCCAGTTTGCGGGCGGCAAAAAAGACAATCAATGTCAGCG < 2:724696/150‑1 AAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCCAGTTTGCGGGCGGCAAAAAAGAC > 1:217516/1‑109 AAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCCAGTTTGCGGGCGGCAAAAAAGAC < 2:217516/109‑1 CGCCAGTTTGCGGGCGGCAAAAAAGACAATCAATGTCAGCGGTAATGACCACCAGATATTCGCCATCATTCTTCTGATCCTTTGTGACCTACGACTTTACGTTCACCGTGTACCAGTTGCGAACTCCAGCTCACCACCAGAAAAACCACC < 1:981743/150‑1 CGCCAGTTTGCGGGCGGCAAAAAAGACAATCAAAGTCAGCGGTAATGACCACCAGATATTCGCAATCATTCTTCTCATACTTACTGACCTACGACTTTACGTTCAACGTTAACCAGTTGCGAACTCCAGCTCACCACAAGAAAAACCACC > 2:521834/1‑150 CAGTTTGCGGGCGGCAAAAAAGACAATCAATGTCAGCGGTAATGACCACCAGATATTCGCCATCATTCTTCTGATCCTTTCTGACCTACGACTTTACGTTCACCGTGTACCAGTTGCGAACTCCAGCTCACCACCAGAAAAACCACCAGC > 2:1485858/1‑150 CTGTGCAGTCAGTACGCTGGTGGTTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2230920‑2231075 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgccAGTTTGCGGGCGGCAAAAAAGACAATCAATGTCAGCGGTAATGACCACCAGATATTCGCCATCATTCTTCTGATCCTTTCTGACCTACGACTTTACGTTCACCGTGTACCAGTTGCGAACTCCAGCTCACCACCAGAAAAACCACCAGC < NC_000913/2231083‑2230935 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |