New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 329510664 (0.670)5 (0.050) 5/262 NT 6.9% coding (1707/2037 nt) lpoA outer membrane lipoprotein ‑ activator of MrcA activity
?NC_000913 = 3295127 73 (0.800)coding (1728/2037 nt) lpoA outer membrane lipoprotein ‑ activator of MrcA activity

CAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACTGGCTC  >  NC_000913/3294957‑3295254
                                                                                                                                                     |                                                                                                                                                    
cAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGC                                                                                                                                                      >  1:1002856‑M1/1‑150 (MQ=255)
cAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGC                                                                                                                                                      >  2:512906‑M1/1‑150 (MQ=255)
    ccACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTccc                                                                                                                                                  <  2:340333/150‑1 (MQ=255)
    ccACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTccc                                                                                                                                                  <  2:1494894/150‑1 (MQ=255)
      aCGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGc                                                                                                                                                <  2:1059484/150‑1 (MQ=255)
           aaCCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTgc                                                                                                                                           <  1:169538/150‑1 (MQ=255)
             ccGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTgcgc                                                                                                                                         <  2:1245891/150‑1 (MQ=255)
                aTGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAg                                                                                                                                      >  1:1407643/1‑150 (MQ=255)
                     cAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGAcc                                                                                                                                 <  1:477445/150‑1 (MQ=255)
                       gTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCggtcccttgcgcactgcgggagc                                                                                                                               <  1:1609525‑M1/150‑24 (MQ=255)
                       gTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCgc                                                                                                                               >  2:151233‑M2/1‑148 (MQ=255)
                          cACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCgctgg                                                                                                                            <  2:1643747‑M2/150‑6 (MQ=255)
                            ccAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCACCGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGcc                                                                                                                          >  1:1187415/1‑150 (MQ=255)
                            ccAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGcc                                                                                                                          >  2:1459394/1‑150 (MQ=255)
                            ccAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGcc                                                                                                                          >  2:961228/1‑150 (MQ=255)
                            ccAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAAAGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGcc                                                                                                                          >  2:961231/1‑150 (MQ=255)
                             cAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCggtcccttgcgcactgcgggagctggcgt                                                                                                                         <  2:1308615‑M1/150‑30 (MQ=255)
                              aataatGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCggtcccttgcgcactgcgggagctggcgta                                                                                                                        <  2:740149‑M1/150‑31 (MQ=255)
                                taatGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGa                                                                                                                      <  1:543582/150‑1 (MQ=255)
                                  atGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGAtt                                                                                                                    >  2:1312319/1‑150 (MQ=255)
                                  atGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGAGGAGCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCggtcccttgcgcactgcgggagctggcgtacagc                                                                                                                    <  2:1661738‑M1/150‑35 (MQ=255)
                                   tGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGGGAAATCGCGTTTATCAAACCGATGAGCGCCATGCGTAACGGGAGCCAGAGCGGTGCAACGCTGTACGCCAGCggtcccttgcgcactgcgggagctggcgtacagcg                                                                                                                   <  1:1040390‑M1/150‑36 (MQ=255)
                                     gCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTcc                                                                                                                 >  1:1528927/1‑150 (MQ=255)
                                     gCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTcc                                                                                                                 <  1:396492/150‑1 (MQ=255)
                                         tCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACt                                                                                                             <  2:175769/150‑1 (MQ=255)
                                             gtCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGgag                                                                                                         <  1:1023624/150‑1 (MQ=255)
                                                  tGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGa                                                                                                    >  1:1112005/1‑150 (MQ=255)
                                                      gtgtACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGc                                                                                                <  2:850748/150‑1 (MQ=255)
                                                          aCATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGc                                                                                            <  1:1176214/150‑1 (MQ=255)
                                                          aCATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGc                                                                                            <  1:512906/150‑1 (MQ=255)
                                                          aCATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGc                                                                                            <  2:752772/150‑1 (MQ=255)
                                                          aCATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGc                                                                                            <  1:1159817/150‑1 (MQ=255)
                                                          aCATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGAACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGc                                                                                            >  1:1166941/1‑150 (MQ=255)
                                                           cATTGTGGCAACGCCGGGTGAATTCGCTTTTATCAAAGCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCa                                                                                           <  1:44493/150‑1 (MQ=255)
                                                           cATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCGGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCa                                                                                           >  2:232688/1‑150 (MQ=255)
                                                           cATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCa                                                                                           >  1:736281/1‑150 (MQ=255)
                                                            aTTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAg                                                                                          <  2:316705/150‑1 (MQ=255)
                                                                        ccGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATc                                                                              <  1:485577/150‑1 (MQ=255)
                                                                           ggTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCg                                                                           <  2:1002856/150‑1 (MQ=255)
                                                                           ggTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCg                                                                           <  1:477483/150‑1 (MQ=255)
                                                                             tGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCGAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAATGCTTGGAGTACAGCGAAATCCCGAt                                                                         <  2:641348/150‑1 (MQ=255)
                                                                             gatcaTCGGTTTGATAAAAGCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGAt                                                                         >  2:148189/5‑150 (MQ=255)
                                                                             gatcaTCGGTTTGATAAAAGCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGAt                                                                         >  1:222473/5‑150 (MQ=255)
                                                                              gAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATg                                                                        <  2:1407643/150‑1 (MQ=255)
                                                                                aaTCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCt                                                                      >  2:1128628/1‑150 (MQ=255)
                                                                                aaTCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCt                                                                      >  1:330564/1‑150 (MQ=255)
                                                                                 aTCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTg                                                                     >  1:127958/1‑150 (MQ=255)
                                                                                 aTCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTg                                                                     >  2:356348/1‑150 (MQ=255)
                                                                                 aTCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTg                                                                     >  2:302520/1‑150 (MQ=255)
                                                                                   cGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGCACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGc                                                                   <  2:1166941/150‑1 (MQ=255)
                                                                                      ttttATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAgg                                                                >  2:412610/1‑150 (MQ=255)
                                                                                          aTCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGt                                                            >  2:1610757/1‑150 (MQ=255)
                                                                                            cAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTaa                                                          >  2:1045734/1‑150 (MQ=255)
                                                                                            cAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTaa                                                          >  2:1576465/1‑150 (MQ=255)
                                                                                             aaaCCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAAt                                                         >  2:155239/1‑150 (MQ=255)
                                                                                                  gatgatCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTAcc                                                    <  1:1388952/150‑1 (MQ=255)
                                                                                                         gCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATg                                             >  2:548206/1‑150 (MQ=255)
                                                                                                          ccATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATgc                                            <  2:781054/150‑1 (MQ=255)
                                                                                                             tGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATgcagc                                         <  2:736281/150‑1 (MQ=255)
                                                                                                              gCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATgcagca                                        >  2:12127/1‑150 (MQ=255)
                                                                                                                    cGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACt                                  <  1:805207/150‑1 (MQ=255)
                                                                                                                              agCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTg                        <  2:1528927/150‑1 (MQ=255)
                                                                                                                              agCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTg                        <  1:1610757/150‑1 (MQ=255)
                                                                                                                              agCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTg                        <  1:1459394/150‑1 (MQ=255)
                                                                                                                               gCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGa                       <  1:961228/150‑1 (MQ=255)
                                                                                                                               gCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGGGa                       <  1:961231/150‑1 (MQ=255)
                                                                                                                                    gaaaCGCTGTACGCCAGCTCCCTCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAAc                  >  2:678919/3‑150 (MQ=255)
                                                                                                                                    gCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAAc                  >  1:478132/1‑150 (MQ=255)
                                                                                                                                     cAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACg                 >  1:598900/1‑150 (MQ=255)
                                                                                                                                     cAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACg                 <  2:941121/150‑1 (MQ=255)
                                                                                                                                        cGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCgctggcgtacagcgttgcaccgctctggctcccgttacgcatggcgctcatcggtttgataaacgcgatttcccccggcgttgccacaatgtacaccgcatcgacacgaccgcca              <  1:1040390‑M2/150‑116 (MQ=255)
                                                                                                                                         gCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCgctggcgtacagcgttgcaccgctctggctaccgttacgcatggcgctcctcggtttgataaaagcgatttcacccggcgttgccacaatgtacaccgcatcgacacgaccgccat             <  2:1661738‑M2/150‑117 (MQ=255)
                                                                                                                                          cTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGattat            >  2:852521/1‑150 (MQ=255)
                                                                                                                                             tACGCCAGCTCCCGCAGTGCGCAAGGGACCgctggcgtacagcgttgcaccgctctggctaccgttacgcatggcgatcatcggtttgataaaagcgatttcacccggcgttgccacaatgtacaccgcatcgacacgaccgccattatt         <  2:740149‑M2/150‑121 (MQ=255)
                                                                                                                                              aCGCCAGCTCCCGCAGTGCGCAAGGGACCgctggcgtacagcgttgcaccgctctggctaccgttacgcatggcgatcatcggtttgataaaagcgatttcacccggcgttgccacaatgtacaccgcatcgacacgaccgccattattg        <  2:1308615‑M2/150‑122 (MQ=255)
                                                                                                                                              aCGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGAAGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCAc        >  2:673259/1‑150 (MQ=255)
                                                                                                                                               cGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACt       >  2:685363/1‑150 (MQ=255)
                                                                                                                                                gCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACTg      <  1:1128628/150‑1 (MQ=255)
                                                                                                                                                gCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACTg      <  2:127958/150‑1 (MQ=255)
                                                                                                                                                 ccAGCggtcccttgcgcactgcgggagctggcgtacagcgttgcaccgctctggctaccgttacgcatggcgatcatcggtttgataaaagcgatttcacccggcgttgccacaatgtacaccgcatcgacacgaccgccattattggtg     <  2:1643747‑M1/150‑146 (MQ=255)
                                                                                                                                                 ccAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACTATTATTCACTgg     <  2:144451/150‑1 (MQ=255)
                                                                                                                                                 ccAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACTgg     >  1:1468148/1‑150 (MQ=255)
                                                                                                                                                   aGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGTAGATGGAAGGCTTGCAGTACATCTAAATCCCGATGCTGGCAGGCGGTAATCTACCTTTAATTCAGCAGGAACTCTTCGCGGTTAATAACTATTATTCTCTGTCt   <  2:131456/150‑1 (MQ=255)
                                                                                                                                                    gCggtcccttgcgcactgcgggagctggcgtacagcgttgcaccgctctggctaccgttacgcatggcgatcatcggtttgataaaagcgatttcacccggcgttgccacaatgtacaccgcatcgacacgaccgccattattggtgaac  >  2:151233‑M1/1‑2 (MQ=255)
                                                                                                                                                    gCTCCCGCAGTGCGCAAGGGACCgctggcgtacagcgttgcaccgctctggctaccgttacgcatggcgatcatcggtttgataaaagcgatttcacccggcgttgccacaatgtacaccgcatcgacacgaccgccattattggtgaac  <  1:1609525‑M2/150‑128 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACTGGCTC  >  NC_000913/3294957‑3295254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.