New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1200516 =	90 (0.950)	6 (0.060)	4/266	NT	6.8%	coding (291/1128 nt)	intE	e14 prophage; putative integrase
	?	NC_000913	1200556 =	77 (0.830)					coding (251/1128 nt)	intE	e14 prophage; putative integrase

TGACATCAACGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCT  >  NC_000913/1200407‑1200702                                                                                                                                                          |                                                                                                                                                   tGACATCAACGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACg                                                                                                                                                    <  2:1208386/150‑1 (MQ=255)  tatcgctattgccactgaggccaacactcgcctggctgaacaaagaacccggcagattctggctatcagtgacaggatcgcaaccagcaaaggaaaggctatcacaacGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGt                                                                                                                                                   >  1:290561‑M1/109‑150 (MQ=255)   atcgctattgccactgaggccaacactcgcctggctgaacaaagaacccggcagattctggctatcagtgacaggatcgcaaccagcaaaggaaaggctatcacaacGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGtt                                                                                                                                                  >  2:455176‑M1/108‑150 (MQ=255)    tcgctattgccactgaggccaacactcgcctggctgaacaaagaacccggcagattctggctatcagtgacaggatcgcaaccagcaaaggaaaggctatcacaacGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTtg                                                                                                                                                 >  2:655254‑M1/107‑150 (MQ=255)    tcgctattgccacggaggccaacactcgcctggctgaacaaagaacccggcagagtctggctatcagtgacaggatcgcaaccagcaaaggaaaggctatcacaacGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTtg                                                                                                                                                 >  2:854670‑M1/107‑150 (MQ=255)    cATCAACGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTtg                                                                                                                                                 <  2:234949/150‑1 (MQ=255)    cATCAACGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTtg                                                                                                                                                 <  1:14676/150‑1 (MQ=255)     aTCAACGGCTGAGATCAACTTCATACCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTtgt                                                                                                                                                <  2:1576476/150‑1 (MQ=255)       cAACGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGa                                                                                                                                              >  2:174459/1‑150 (MQ=255)        aaCGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGAt                                                                                                                                             <  1:88257/150‑1 (MQ=255)        aaCGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGAt                                                                                                                                             <  1:980206/150‑1 (MQ=255)        aaCGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGAt                                                                                                                                             <  2:1185518/150‑1 (MQ=255)         aCGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATa                                                                                                                                            <  1:1555493/150‑1 (MQ=255)         aCGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATa                                                                                                                                            >  1:310695/1‑150 (MQ=255)            gCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGcc                                                                                                                                         >  2:1661357/1‑150 (MQ=255)            gCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGcc                                                                                                                                         <  2:1655263/150‑1 (MQ=255)               gagaTCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGccttt                                                                                                                                      >  2:830941/1‑150 (MQ=255)                agaTCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGcctttc                                                                                                                                     >  1:1374228/1‑150 (MQ=255)                   tCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGcctttcctt                                                                                                                                  >  1:911275/1‑150 (MQ=255)                   tCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGcctttcctt                                                                                                                                  >  1:249061/1‑150 (MQ=255)                    cAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGcctttccttt                                                                                                                                 <  2:1374228/150‑1 (MQ=255)                        ttCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTg                                                                                                                             <  2:425874/150‑1 (MQ=255)                         tCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTgt                                                                                                                            >  2:1293925/1‑149 (MQ=255)                            ttCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTg                                                                                                                         <  2:159155/150‑1 (MQ=255)                              ccTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCg                                                                                                                       >  1:1384459/1‑150 (MQ=255)                                tGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGAt                                                                                                                     <  2:1491062/150‑1 (MQ=255)                                 ctggctgaacaaagaacccggcagattctggctatcagtgacaggatcgcaaccagcaaaggaaaggctatcacaacGTCAACCTGGTTAGATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGc                                                                                                                        >  1:988765‑M1/78‑150 (MQ=255)                                   tCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCt                                                                                                                  <  1:1661357/150‑1 (MQ=255)                                      ttCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTc                                                                                                               <  2:805172/150‑1 (MQ=255)                                        ctctGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCAc                                                                                                             <  2:968951/150‑1 (MQ=255)                                            gAGCAAGGATACTGGTTTAGCTTTATGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGGTGGTTGCGATCATGTCACTGAt                                                                                                         >  2:1099997/1‑150 (MQ=255)                                             aGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTACCCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATa                                                                                                        >  2:180633/1‑150 (MQ=255)                                             aGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATa                                                                                                        <  2:914670/150‑1 (MQ=255)                                              gCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAg                                                                                                       >  1:1198850/1‑150 (MQ=255)                                              gCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAg                                                                                                       <  1:893033/150‑1 (MQ=255)                                               cAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGc                                                                                                      >  1:691275/1‑150 (MQ=255)                                               cAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGc                                                                                                      >  2:1162713/1‑150 (MQ=255)                                                      aCTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATc                                                                                               >  2:919635/1‑150 (MQ=255)                                                         ggTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGc                                                                                            >  2:595922/1‑150 (MQ=255)                                                         ggTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGc                                                                                            >  2:344567/1‑150 (MQ=255)                                                          gTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGcc                                                                                           <  1:1620385/150‑1 (MQ=255)                                                          gTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCAATTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGACTTTCATTTGCTGGTTGAGATACTGTCACTGATAGCCAGAATCTGcc                                                                                           >  2:898353/1‑150 (MQ=255)                                                              aGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGt                                                                                       >  1:110683/1‑150 (MQ=255)                                                                   tttGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCttt                                                                                  >  2:1191078/1‑150 (MQ=255)                                                                   tttGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCttt                                                                                  <  1:233243/150‑1 (MQ=255)                                                                    ttGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTg                                                                                 <  1:919635/150‑1 (MQ=255)                                                                     tGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGt                                                                                <  1:344567/150‑1 (MQ=255)                                                                      ctttATACGTGTTCAGTATTATAACACAACTTTTAAACATTTCATACTGG‑‑‑‑ATCAATTCATAGCTATCAAACAAAGTTAACATTATAATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGtt                                                                               >  2:1630945/2‑150 (MQ=255)                                                                        ttATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCa                                                                             <  1:109129/150‑1 (MQ=255)                                                                           taGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGcc                                                                          >  2:565764/1‑150 (MQ=255)                                                                            aGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCa                                                                         <  2:1198850/150‑1 (MQ=255)                                                                               tgtTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTTG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTCTGTTCAGCCAGGc                                                                      <  1:865891/150‑1 (MQ=255)                                                                                 gcaaccagcaaaggaaaggctatcacaacgtcaacctggttagatcgctatcaagcgatctaaccaggttgacGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAg                                                                        >  1:988765‑M2/74‑150 (MQ=255)                                                                                         tataTCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGc                                                            >  1:1572829/1‑150 (MQ=255)                                                                                         tataTCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGc                                                            >  1:298311/1‑150 (MQ=255)                                                                                            atCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATa                                                                                                        <  2:225314/103‑1 (MQ=255)                                                                                            atCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATa                                                                                                        >  1:225314/1‑103 (MQ=255)                                                                                            atCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTc                                                         >  1:1642091/1‑150 (MQ=255)                                                                                            atCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTc                                                         >  1:633142/1‑150 (MQ=255)                                                                                              caccacTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAg                                                       >  2:1404603/1‑150 (MQ=255)                                                                                              caccacTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATATAACCAGGTTGAAGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAg                                                       >  2:174296/1‑150 (MQ=255)                                                                                               accacTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGt                                                      >  1:1202772/1‑150 (MQ=255)                                                                                               accacTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGt                                                      >  2:1223552/1‑150 (MQ=255)                                                                                                ccacTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTg                                                     >  1:449120/1‑150 (MQ=255)                                                                                                 cacTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTgg                                                    <  2:310695/150‑1 (MQ=255)                                                                                                  acTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGc                                                   <  1:174459/150‑1 (MQ=255)                                                                                                  acTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGc                                                   <  2:127929/150‑1 (MQ=255)                                                                                                  acTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGc                                                   <  2:691275/150‑1 (MQ=255)                                                                                                         aGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCg                                            >  1:62024/1‑150 (MQ=255)                                                                                                           ccTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGAt                                          >  2:1314332/1‑150 (MQ=255)                                                                                                              caacgtcaacctggttagatcgctatcaagcgatccaggatgacGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGACTCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCCGTGGCAATAGCGa                                           >  2:854670‑M2/45‑150 (MQ=255)                                                                                                              caacgtcaacctggttagatcgctatcaagcgatccaggatgacGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGa                                           >  2:655254‑M2/45‑150 (MQ=255)                                                                                                              GTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGc                                       >  2:249061‑M1/1‑150 (MQ=255)                                                                                                               aacgtcaacctggttagatcgctatcaagcgatccaggatgacGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGAt                                          >  2:455176‑M2/44‑150 (MQ=255)                                                                                                                acgtcaacctggttagatcgctatcaagcgatccaggatgacGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATa                                         >  1:290561‑M2/43‑150 (MQ=255)                                                                                                                  tCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGTGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATagcttca                                   >  2:1573068/1‑150 (MQ=255)                                                                                                                  tCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGc                                             <  1:1413142/140‑1 (MQ=255)                                                                                                                  tCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGc                                             >  2:1413142/1‑140 (MQ=255)                                                                                                                  tCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATagcttca                                   >  1:367332/1‑150 (MQ=255)                                                                                                                   ccTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATagcttcag                                  <  2:119771/150‑1 (MQ=255)                                                                                                                    ctggttagatcgctatcaagcgatccaaccaggttgacGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATagctt                                     >  1:971433‑M2/39‑150 (MQ=255)                                                                                                                            aTCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGTGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCg                             <  1:1573068/150‑1 (MQ=255)                                                                                                                              ggCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGtt                           <  1:167108/149‑1 (MQ=255)                                                                                                                              cGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGtt                           <  1:433096/150‑1 (MQ=255)                                                                                                                               gCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGttt                          >  2:932601/1‑150 (MQ=255)                                                                                                                                cTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTg                         <  1:932601/150‑1 (MQ=255)                                                                                                                                 ttGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGt                        >  2:965273/1‑150 (MQ=255)                                                                                                                                  tGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGtt                       >  2:87190/1‑150 (MQ=255)                                                                                                                                   gATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTc                      <  1:1191078/150‑1 (MQ=255)                                                                                                                                       gCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCaa                  >  1:1325203/1‑150 (MQ=255)                                                                                                                                        cGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCaaa                 >  1:418547/1‑150 (MQ=255)                                                                                                                                            cTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCAt             >  1:1466865/1‑150 (MQ=255)                                                                                                                                                ccAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGaa         >  1:1457267/1‑150 (MQ=255)                                                                                                                                                 cAGGTTGACGTTGCGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAAt        >  2:638929/1‑150 (MQ=255)                                                                                                                                                     ttGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCACGCGAGTGTTGGCCTCAGTGGCAATACCGATAGCTTCAGCTTCGATTGTTCCCAAACCATGGAATTTTc    >  2:924727/1‑150 (MQ=255)                                                                                                                                                       gacGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCt  <  1:317504‑M2/147‑1 (MQ=255)                                                                                                                                                          |                                                                                                                                                   TGACATCAACGGCTGAGATCAACTTCATTCCTGCTCGTTCTCTGAGCAAGGATACTGGTTTAGCTTTTTGTTTATAGGTGTTGAGTCTTATATCACCACTTTTAAGCCTGTCATCCTGG‑‑‑‑ATCGCTTGATAGCGATCTAACCAGGTTGACGTTGTGATAGCCTTTCCTTTGCTGGTTGCGATCCTGTCACTGATAGCCAGAATCTGCCGGGTTCTTTGTTCAGCCAGGCGAGTGTTGGCCTCAGTGGCAATAGCGATAGCTTCAGCTTCGTTTGTTCCCAAAGCATGGAATTTTCCT  >  NC_000913/1200407‑1200702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.