BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3556422 =	96 (1.010)	5 (0.050)	5/268	NT	5.4%	coding (428/1017 nt)	rtcA	RNA 3'‑terminal phosphate cyclase
*	?	NC_000913	3556490 =	83 (0.890)	5 (0.050)	5/268	NT	5.4%	coding (360/1017 nt)	rtcA	RNA 3'‑terminal phosphate cyclase

Only 100 of 111 total aligned reads displayed.

TCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAAGAGCAGACGCTGCGACCCCA  >  NC_000913/3556341‑3556638

tCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTc                                                                                                                                                       >  1:1036108/1‑150 (MQ=255)

tCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTc                                                                                                                                                       >  2:860274/1‑150 (MQ=255)

tCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTc                                                                                                                                                       >  2:1591767/1‑150 (MQ=255)

tCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTc                                                                                                                                                       >  1:86784/1‑150 (MQ=255)

agcgccggaagttgtacgctggtgctgcaaacggtgctgcccgcgctgtggtttgccgatggaccttcgcgtgttgaagtgAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTc                                                                                                                                                       >  1:180722‑M1/82‑150 (MQ=255)

agcgccggaagttgtacgctggtgctgcaaacggtgctgcccgcgctgtggtttgccgatggaccttcgcgtgttgaagtgAGC‑‑‑GGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACt                                                                                                                                                    >  2:442705‑M1/82‑150 (MQ=255)

 gcgccggaagttgtacgctggtgctgcaaacggtgccgcccgcgctgtggtttgccgatggaccttcgcgtgttgaagtgAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCa                                                                                                                                                      >  1:518767‑M1/81‑150 (MQ=255)

 ccGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCa                                                                                                                                                      <  1:248101/150‑1 (MQ=255)

   gTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACt                                                                                                                                                    <  1:1290280/150‑1 (MQ=255)

    ttGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACtt                                                                                                                                                   <  2:579009/150‑1 (MQ=255)

     tGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTTTCGGTGCCGCCGCTCACTTc                                                                                                                                                  <  2:862075/150‑1 (MQ=255)

      gCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCa                                                                                                                                                 <  2:1177839/150‑1 (MQ=255)

       ccaccaCACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCaa                                                                                                                                                >  2:1645614/1‑150 (MQ=255)

        caccacACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCCGGCGGCGCCGCCGGGTTATCGGTGCCGCCGCTCACTTCAac                                                                                                                                               >  2:30125/1‑150 (MQ=255)

             cacCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACAcgcg                                                                                                                                          <  2:175034/150‑1 (MQ=255)

             cacCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACAcgcg                                                                                                                                          <  1:310768/150‑1 (MQ=255)

               ccGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGaa                                                                                                                                        >  1:589822/1‑150 (MQ=255)

               ccGCCTCCGGCAGGGTAAAAACCGTGGCGTAACACCGTGGTTTGATGATGAATTCCTATTTTCGCCAGCAGCGGCTCCACCACCCGCCGGATAAAATCCCCAGGCGGCGCCAACGGGTTATCGGTGCCCCCCAACACTTCAACACCCGaa                                                                                                                                        >  2:750570/1‑150 (MQ=255)

                  ccTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGt                                                                                                                                     <  1:812843/150‑1 (MQ=255)

                   cTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTc                                                                                                                                    >  1:1254357/1‑150 (MQ=255)

                   cTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTc                                                                                                                                    <  1:1618529/150‑1 (MQ=255)

                   cTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTc                                                                                                                                    <  1:33253/150‑1 (MQ=255)

                    tCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTcc                                                                                                                                   >  1:1223534/1‑150 (MQ=255)

                    tCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGACAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTcc                                                                                                                                   >  2:398840/1‑150 (MQ=255)

                       ggCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATc                                                                                                                                >  1:1014839/1‑150 (MQ=255)

                       ggCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATc                                                                                                                                >  1:768507/1‑150 (MQ=255)

                         cAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCgg                                                                                                                              <  1:530646/150‑1 (MQ=255)

                         cAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAAAACGCGAAGGTCCATCgg                                                                                                                              <  2:601677/150‑1 (MQ=255)

                           gggTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCa                                                                                                                            >  1:997233/1‑150 (MQ=255)

                             gTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGt                                                                                                                                     >  2:105029/1‑139 (MQ=255)

                             gTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGt                                                                                                                                     <  1:105029/139‑1 (MQ=255)

                             gTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCaaa                                                                                                                          >  1:691721/1‑150 (MQ=255)

                             gTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCaaa                                                                                                                          >  1:197942/1‑150 (MQ=255)

                                   aCCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAGAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAg                                                                                                                    <  2:1276848/150‑1 (MQ=255)

                                   aCCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCTTCGGCAAACCACAg                                                                                                                    <  1:1043419/150‑1 (MQ=255)

                                   aCCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAg                                                                                                                    >  2:329587/1‑150 (MQ=255)

                                        ggCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCgg                                                                                                               <  1:582504/150‑1 (MQ=255)

                                             aaCAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagc                                                                                                          <  1:1197686/150‑1 (MQ=255)

                                             aaCAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagc                                                                                                          <  1:665623/150‑1 (MQ=255)

                                                aGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAcc                                                                                                       >  2:743007/1‑150 (MQ=255)

                                                    tGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGttt                                                                                                   <  1:750570/150‑1 (MQ=255)

                                                     ggTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTg                                                                                                  <  2:589822/150‑1 (MQ=255)

                                                       tttGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgca                                                                                                <  1:1079408/150‑1 (MQ=255)

                                                        ttGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgcag                                                                                               <  2:844857/150‑1 (MQ=255)

                                                        ttGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgcag                                                                                               <  1:1067485/150‑1 (MQ=255)

                                                          gCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgcagca                                                                                             >  1:173152/1‑150 (MQ=255)

                                                          gCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgcagca                                                                                             >  1:1173205/1‑150 (MQ=255)

                                                           cTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAc                                                                                            <  2:173152/150‑1 (MQ=255)

                                                           cTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAc                                                                                            >  1:332426/1‑150 (MQ=255)

                                                            tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAac                                                                                                                                               >  1:591696/1‑98 (MQ=255)

                                                            tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAac                                                                                                                                               <  2:591696/98‑1 (MQ=255)

                                                            tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAcc                                                                                           >  1:1326086/1‑150 (MQ=255)

                                                             gatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCa                                                                                          >  1:756784/1‑150 (MQ=255)

                                                                    tCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACa                                                                                  <  1:329587/150‑1 (MQ=255)

                                                                    tCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACa                                                                                  <  1:815664/150‑1 (MQ=255)

                                                                     ccTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACaa                                                                                 >  1:97031/1‑150 (MQ=255)

                                                                     ccTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACaa                                                                                 >  2:666309/1‑150 (MQ=255)

                                                                     ccTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACaa                                                                                 >  2:614730/1‑150 (MQ=255)

                                                                               tgagcggcggcaccgataacccgtcggcgccgcctgcggattttatccgccgggtgctggagccgctgctCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCGGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGgcgc                                                                       >  1:518767‑M2/71‑150 (MQ=255)

                                                                                gagcggcggcaccgataacccgtcggcgccgcctgcggattttatccgccgggtgctggagccgctgctCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCt                                                                      >  1:180722‑M2/70‑150 (MQ=255)

                                                                                agtgagcggcggcaccgataacccgtcggcgccgcctgcggattttatccgccgggtgctggagccgctCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCt                                                                      >  2:442705‑M2/70‑150 (MQ=255)

                                                                                  GCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTAc                                                                    >  1:30125‑M1/1‑150 (MQ=255)

                                                                                    agcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCg                                                                  <  1:379710/150‑1 (MQ=255)

                                                                                     gcggcaccgataacccgtcggcgccgcctgcggattttatccgccgggtgctggagccgctgctCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGa                                                                 >  1:45337‑M2/65‑150 (MQ=255)

                                                                                       ggCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATa                                                               >  2:105324/1‑150 (MQ=255)

                                                                                       ggCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATa                                                               <  1:860274/150‑1 (MQ=255)

                                                                                         cTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGc                                                             >  1:604670/1‑150 (MQ=255)

                                                                                           ccAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCaa                                                           <  2:651303/150‑1 (MQ=255)

                                                                                                aCCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCgg                                                      <  1:1591767/150‑1 (MQ=255)

                                                                                                 cccGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGt                                                     >  1:117890/1‑150 (MQ=255)

                                                                                                  ccGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTa                                                    <  1:417099/150‑1 (MQ=255)

                                                                                                   cggcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTaa                                                   <  1:398840/150‑1 (MQ=255)

                                                                                                     gcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGACAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATc                                                 >  2:494391/1‑150 (MQ=255)

                                                                                                      cggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATcg                                                >  1:223054/1‑150 (MQ=255)

                                                                                                      cggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATcg                                                <  1:183638/150‑1 (MQ=255)

                                                                                                        gATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATcgcc                                              <  2:415801/150‑1 (MQ=255)

                                                                                                          tAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATcgccgc                                            >  2:1589809/1‑150 (MQ=255)

                                                                                                          tAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTACAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATcgccgc                                            >  1:1402361/1‑150 (MQ=255)

                                                                                                              aTCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCcgcg                                        >  1:36126/1‑150 (MQ=255)

                                                                                                                   cAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACgg                                   >  2:1669644/1‑150 (MQ=255)

                                                                                                                   cAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACgg                                   >  1:662332/1‑150 (MQ=255)

                                                                                                                        ggcgCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTgccg                              >  2:1273776/1‑150 (MQ=255)

                                                                                                                        ggcgCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTgccg                              <  2:549187/150‑1 (MQ=255)

                                                                                                                            ccGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCccggcaccgtgcgcggcggcgattaccgctttgctatcggtagcgcc                          <  1:1037565‑M1/150‑48 (MQ=255)

                                                                                                                            ccGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGgcc                          <  1:289131‑M2/150‑4 (MQ=255)

                                                                                                                             cGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGgccg                         >  1:295128‑M2/1‑146 (MQ=255)

                                                                                                                              gACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCccggcaccgtgcgcggcggcgattaccgctttgctatcggtagcgccgg                        <  2:332426‑M1/150‑50 (MQ=255)

                                                                                                                                  ggTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCccggcaccgtgcgcggcggcgattaccgctttgctatcggtagcgccggaagt                    <  1:1645614‑M1/150‑54 (MQ=255)

                                                                                                                                  ggTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGgccggaagc                    <  1:775566‑M2/150‑10 (MQ=255)

                                                                                                                                   gTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAagag                   <  2:13823/150‑1 (MQ=255)

                                                                                                                                   gTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAagag                   >  1:498955/1‑150 (MQ=255)

                                                                                                                                    ttATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAAGAGc                  >  1:847300/1‑150 (MQ=255)

                                                                                                                                    ttATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAAGAGc                  <  2:1036108/150‑1 (MQ=255)

                                                                                                                                     tATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTCTGCTCTTCCGGCccggcaccgtgcgcggcggcgattaccgctttgctatcggtagcgccggaagttg                  <  2:1326086‑M1/150‑56 (MQ=255)

                                                                                                                                      aTCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAAGAGCAg                <  2:604670/150‑1 (MQ=255)

                                                                                                                                        tggagccgctgctCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAAGAGCAGAc              <  2:180722‑M2/137‑1 (MQ=255)

                                                                                                                                         ggTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCCCGGTGCCGGGCCGGAAGAGCAGCCg             >  2:1638342/1‑150 (MQ=255)

                                                                                                                                            gccgccGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAAGAGCAGACGCTg          <  2:691721/150‑1 (MQ=255)

                                                                                                                                              cgccgcTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAAGAGCAGACGCTGCg        >  1:902552/1‑150 (MQ=255)

                                                                                                                                                 cgcTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAAGAGCAGACGCTGCGAcc     <  1:105324/150‑1 (MQ=255)

TCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGT‑ACAACTTCCGGCGCTACCGATAGCAAAGCGGTAATCGCCGCCGCGCACGGTGCCGGGCCGGAAGAGCAGACGCTGCGACCCCA  >  NC_000913/3556341‑3556638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.