mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 168 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 89 (0.940) | 4 (0.040) | 4/260 | NT | 4.4% | coding (324/690 nt) | creB | DNA‑binding transcriptional regulator CreB |
| ? | NC_000913 | = 4636367 | 89 (0.990) | coding (361/690 nt) | creB | DNA‑binding transcriptional regulator CreB | |||||
| * | ? | NC_000913 | 4625174 = | 88 (0.930) | 3 (0.030) | 3/262 | NT | 3.4% | coding (280/969 nt) | serB | phosphoserine phosphatase |
| ? | NC_000913 | 4625219 = | 86 (0.950) | coding (325/969 nt) | serB | phosphoserine phosphatase | |||||
| * | ? | NC_000913 | 4584195 = | 92 (0.970) | 4 (0.040) | 4/260 | NT | 4.6% | coding (2567/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease component |
| ? | NC_000913 | 4584232 = | 77 (0.850) | coding (2530/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease component | |||||
| * | ? | NC_000913 | 4541922 = | 170 (1.790) | 5 (0.050) | 5/266 | NT | 3.1% | intergenic (+363/‑115) | fimB/fimE | regulator for fimA/regulator for fimA |
| ? | NC_000913 | 4541952 = | 150 (1.620) | intergenic (+393/‑85) | fimB/fimE | regulator for fimA/regulator for fimA | |||||
| * | ? | NC_000913 | 4534130 = | 118 (1.240) | 4 (0.050) | 4/254 | NT | 3.6% | intergenic (‑77/+300) | topAI/yjhZ | KpLE2 phage‑like element; toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/KpLE2 phage‑like element; putative acetyltransferase YjhZ |
| ? | NC_000913 | 4534171 = | 104 (1.180) | intergenic (‑118/+259) | topAI/yjhZ | KpLE2 phage‑like element; toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/KpLE2 phage‑like element; putative acetyltransferase YjhZ | |||||
| * | ? | NC_000913 | 4513065 = | 93 (0.980) | 4 (0.040) | 3/264 | NT | 4.3% | coding (345/999 nt) | fecC | ferric citrate ABC transporter membrane subunit FecC |
| ? | NC_000913 | 4513114 = | 87 (0.950) | coding (296/999 nt) | fecC | ferric citrate ABC transporter membrane subunit FecC | |||||
| * | ? | NC_000913 | 4500176 = | 120 (1.260) | 3 (0.030) | 3/268 | NT | 2.6% | pseudogene (616/1199 nt) | yjgX | KpLE2 phage‑like element; putative phosphoethanolamine transferase YjgX, N‑terminal fragment |
| ? | NC_000913 | 4500214 = | 105 (1.130) | pseudogene (578/1199 nt) | yjgX | KpLE2 phage‑like element; putative phosphoethanolamine transferase YjgX, N‑terminal fragment | |||||
| * | ? | NC_000913 | 4481970 = | 106 (1.110) | 4 (0.040) | 4/264 | NT | 3.9% | coding (1868/2856 nt) | valS | valine‑‑tRNA ligase |
| ? | NC_000913 | 4482005 = | 97 (1.060) | coding (1833/2856 nt) | valS | valine‑‑tRNA ligase | |||||
| * | ? | NC_000913 | 4456096 = | 95 (1.000) | 3 (0.030) | 3/266 | NT | 3.0% | coding (312/1374 nt) | mpl | UDP‑N‑acetylmuramate‑‑L‑alanyl‑gamma‑D‑glutamyl‑ meso‑2,6‑diaminoheptanedioate ligase |
| ? | NC_000913 | 4456136 = | 100 (1.080) | coding (352/1374 nt) | mpl | UDP‑N‑acetylmuramate‑‑L‑alanyl‑gamma‑D‑glutamyl‑ meso‑2,6‑diaminoheptanedioate ligase | |||||
| * | ? | NC_000913 | 4425590 = | 94 (0.990) | 4 (0.040) | 4/262 | NT | 4.4% | coding (71/315 nt) | priB | primosomal replication protein N |
| ? | NC_000913 | 4425637 = | 85 (0.930) | coding (118/315 nt) | priB | primosomal replication protein N | |||||