mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 9,907 | A→C | 11.9% | intergenic (+14/+21) | mog → / ← satP | molybdopterin adenylyltransferase/acetate/succinate:H(+) symporter |
| RA | 9,908 | G→T | 10.7% | intergenic (+15/+20) | mog → / ← satP | molybdopterin adenylyltransferase/acetate/succinate:H(+) symporter |
| RA | 15,319 | T→C | 5.1% | intergenic (+21/‑126) | dnaJ → / → insL‑1 | chaperone protein DnaJ/IS186/IS421 transposase |
| RA | 17,527 | G→C | 6.5% | S13S (TCG→TCC) | nhaA → | Na(+):H(+) antiporter NhaA |
| RA | 17,528 | G→C | 7.2% | G14R (GGA→CGA) | nhaA → | Na(+):H(+) antiporter NhaA |
| RA | 28,396 | T→A | 5.6% | V8D (GTT→GAT) | dapB → | 4‑hydroxy‑tetrahydrodipicolinate reductase |
| RA | 28,399 | C→G | 5.7% | A9G (GCC→GGC) | dapB → | 4‑hydroxy‑tetrahydrodipicolinate reductase |
| RA | 28,402 | T→A | 5.5% | I10N (ATC→AAC) | dapB → | 4‑hydroxy‑tetrahydrodipicolinate reductase |
| RA | 30,052 | G→C | 5.9% | A134A (GCG→GCC) | carA → | carbamoyl phosphate synthetase subunit alpha |
| RA | 30,053 | G→C | 5.7% | G135R (GGC→CGC) | carA → | carbamoyl phosphate synthetase subunit alpha |
| RA | 37,307 | T→A | 5.4% | D173V (GAC→GTC) | caiC ← | carnitine‑CoA ligase |
| RA | 37,309 | A→T | 5.4% | T172T (ACT→ACA) ‡ | caiC ← | carnitine‑CoA ligase |
| RA | 37,311 | T→A | 5.3% | T172S (ACT→TCT) ‡ | caiC ← | carnitine‑CoA ligase |
| RA | 78,831 | T→A | 5.1% | intergenic (+32/+17) | setA → / ← leuD | sugar exporter SetA/3‑isopropylmalate dehydratase subunit LeuD |
| RA | 81,158 | C→T | 5.0% | L267L (TTG→TTA) | leuB ← | 3‑isopropylmalate dehydrogenase |
| RA | 106,831 | T→A | 8.6% | I92N (ATT→AAT) | lpxC → | UDP‑3‑O‑acyl‑N‑acetylglucosamine deacetylase |
| RA | 110,876 | C→T | 5.5% | A866A (GCC→GCT) | secA → | protein translocation ATPase |
| RA | 110,879 | A→G | 5.4% | A867A (GCA→GCG) | secA → | protein translocation ATPase |
| RA | 127,603 | C→G | 7.6% | intergenic (+16/‑309) | aceF → / → lpd | pyruvate dehydrogenase, E2 subunit/lipoamide dehydrogenase |
| RA | 127,604 | A→T | 7.5% | intergenic (+17/‑308) | aceF → / → lpd | pyruvate dehydrogenase, E2 subunit/lipoamide dehydrogenase |
| RA | 127,605 | A→T | 7.5% | intergenic (+18/‑307) | aceF → / → lpd | pyruvate dehydrogenase, E2 subunit/lipoamide dehydrogenase |
| RA | 127,606 | C→G | 8.0% | intergenic (+19/‑306) | aceF → / → lpd | pyruvate dehydrogenase, E2 subunit/lipoamide dehydrogenase |
| RA | 151,519 | A→C | 5.8% | I27M (ATT→ATG) | yadK ← | putative fimbrial protein YadK |
| RA | 151,522 | G→T | 6.8% | A26A (GCC→GCA) | yadK ← | putative fimbrial protein YadK |
| RA | 177,396 | C→T | 6.0% | V77M (GTG→ATG) | yadS ← | conserved inner membrane protein YadS |
| RA | 207,483 | A→C | 6.4% | V786V (GTA→GTC) | dnaE → | DNA polymerase III subunit alpha |
| RA | 207,486 | G→T | 6.2% | M787I (ATG→ATT) | dnaE → | DNA polymerase III subunit alpha |
| RA | 212,726 | T→G | 5.2% | S132R (AGT→AGG) | tilS → | tRNA(Ile)‑lysidine synthetase |
| RA | 212,728 | G→C | 5.3% | G133A (GGC→GCC) | tilS → | tRNA(Ile)‑lysidine synthetase |
| RA | 212,730 | C→A | 5.2% | P134T (CCT→ACT) | tilS → | tRNA(Ile)‑lysidine synthetase |
| RA | 216,066 | A→G | 6.3% | intergenic (+87/+113) | nlpE → / ← yaeF | lipoprotein NlpE/peptidase C92 family protein |
| RA | 238,141 | G→A | 10.2% | intergenic (+21/+116) | yafT → / ← ykfM | lipoprotein YafT/uncharacterized protein YkfM |
| RA | 238,146 | T→C | 8.9% | intergenic (+26/+111) | yafT → / ← ykfM | lipoprotein YafT/uncharacterized protein YkfM |
| RA | 242,344 | C→G | 6.5% | P320P (CCG→CCC) | fadE ← | acyl‑CoA dehydrogenase |
| RA | 252,589 | G→C | 8.6% | A97P (GCA→CCA) | yafO → | ribosome‑dependent mRNA interferase toxin YafO |
| RA | 252,594 | G→C | 7.9% | W98C (TGG→TGC) | yafO → | ribosome‑dependent mRNA interferase toxin YafO |
| RA | 256,913 | T→A | 5.5% | A129A (GCT→GCA) | frsA → | fermentation‑respiration switch protein |
| RA | 256,915 | C→T | 5.4% | T130M (ACG→ATG) | frsA → | fermentation‑respiration switch protein |
| RA | 256,926 | A→G | 5.8% | I134V (ATT→GTT) ‡ | frsA → | fermentation‑respiration switch protein |
| RA | 256,928 | T→A | 5.5% | I134I (ATT→ATA) ‡ | frsA → | fermentation‑respiration switch protein |
| MC JC | 257,908 | Δ776 bp | 100% | insB9–[crl] | insB9, insA9, [crl] | |
| RA | 265,573 | G→A | 6.3% | intergenic (‑30/+47) | ykfF ← / ← ykfB | CP4‑6 prophage; protein YkfF/CP4‑6 prophage; protein YkfB |
| RA | 272,330:1 | +G | 6.1% | intergenic (+140/‑250) | insN → / → eyeA | CP4‑6 prophage; IS911A regulator fragment/CP4‑6 prophage; small RNA EyeA |
| RA | 314,255 | T→C | 13.4% | intergenic (‑450/‑102) | ykgP ← / → eaeH | putative oxidoreductase/putative porin domain‑containing protein EaeH |
| RA | 314,258 | G→A | 13.5% | intergenic (‑453/‑99) | ykgP ← / → eaeH | putative oxidoreductase/putative porin domain‑containing protein EaeH |
| RA | 324,575 | T→C | 5.2% | intergenic (+122/+121) | ykgG → / ← ykgH | DUF162 domain‑containing lactate utilization protein YkgG/uncharacterized protein YkgH |
| RA | 324,579 | A→G | 5.2% | intergenic (+126/+117) | ykgG → / ← ykgH | DUF162 domain‑containing lactate utilization protein YkgG/uncharacterized protein YkgH |
| RA | 324,580 | C→G | 5.1% | intergenic (+127/+116) | ykgG → / ← ykgH | DUF162 domain‑containing lactate utilization protein YkgG/uncharacterized protein YkgH |
| RA | 324,581 | C→T | 5.2% | intergenic (+128/+115) | ykgG → / ← ykgH | DUF162 domain‑containing lactate utilization protein YkgG/uncharacterized protein YkgH |
| RA | 324,585 | G→A | 5.1% | intergenic (+132/+111) | ykgG → / ← ykgH | DUF162 domain‑containing lactate utilization protein YkgG/uncharacterized protein YkgH |
| RA | 324,874 | T→G | 6.4% | N164T (AAC→ACC) ‡ | ykgH ← | uncharacterized protein YkgH |
| RA | 324,875 | T→A | 6.4% | N164Y (AAC→TAC) ‡ | ykgH ← | uncharacterized protein YkgH |
| RA | 324,876 | C→A | 6.5% | R163S (AGG→AGT) | ykgH ← | uncharacterized protein YkgH |
| RA | 328,375 | A→C | 5.8% | I120S (ATC→AGC) | betB ← | betaine aldehyde dehydrogenase |
| RA | 328,377 | C→G | 6.7% | L119L (CTG→CTC) ‡ | betB ← | betaine aldehyde dehydrogenase |
| RA | 328,379 | G→T | 5.7% | L119M (CTG→ATG) ‡ | betB ← | betaine aldehyde dehydrogenase |
| RA | 329,523 | T→A | 5.0% | S21T (TCC→ACC) | betT → | choline:H(+) symporter |
| RA | 336,866 | G→C | 5.2% | G30A (GGC→GCC) | yahF → | putative acyl‑CoA synthetase YahF |
| RA | 349,946 | A→G | 7.2% | intergenic (+374/‑66) | prpB → / → prpC | 2‑methylisocitrate lyase/2‑methylcitrate synthase |
| RA | 349,947 | A→C | 7.2% | intergenic (+375/‑65) | prpB → / → prpC | 2‑methylisocitrate lyase/2‑methylcitrate synthase |
| RA | 357,156 | T→A | 5.5% | L329Q (CTG→CAG) | codA → | cytosine/isoguanine deaminase |
| RA | 357,160 | A→C | 5.4% | Q330H (CAA→CAC) | codA → | cytosine/isoguanine deaminase |
| RA | 357,165 | T→A | 5.9% | L332Q (CTG→CAG) | codA → | cytosine/isoguanine deaminase |
| RA | 361,220 | A→C | 6.2% | intergenic (+74/+29) | cynX → / ← lacA | cyanate transporter/galactoside O‑acetyltransferase |
| RA | 361,223 | G→T | 6.6% | intergenic (+77/+26) | cynX → / ← lacA | cyanate transporter/galactoside O‑acetyltransferase |
| RA | 361,224 | C→G | 6.2% | intergenic (+78/+25) | cynX → / ← lacA | cyanate transporter/galactoside O‑acetyltransferase |
| RA | 361,225 | A→C | 6.1% | intergenic (+79/+24) | cynX → / ← lacA | cyanate transporter/galactoside O‑acetyltransferase |
| RA | 361,228 | G→T | 5.9% | intergenic (+82/+21) | cynX → / ← lacA | cyanate transporter/galactoside O‑acetyltransferase |
| RA | 371,064 | C→G | 5.4% | A263G (GCC→GGC) | mhpB → | 3‑carboxyethylcatechol 2,3‑dioxygenase |
| RA | 371,067 | T→A | 5.6% | I264N (ATT→AAT) | mhpB → | 3‑carboxyethylcatechol 2,3‑dioxygenase |
| RA | 371,070 | C→G | 5.5% | A265G (GCC→GGC) | mhpB → | 3‑carboxyethylcatechol 2,3‑dioxygenase |
| RA | 373,332 | C→G | 8.3% | P138A (CCA→GCA) ‡ | mhpF → | acetaldehyde dehydrogenase (acylating) |
| RA | 373,333 | C→G | 8.3% | P138R (CCA→CGA) ‡ | mhpF → | acetaldehyde dehydrogenase (acylating) |
| RA | 388,669 | G→T | 5.1% | intergenic (+23/+84) | tauD → / ← hemB | taurine dioxygenase/porphobilinogen synthase |
| RA | 388,674 | C→A | 5.1% | intergenic (+28/+79) | tauD → / ← hemB | taurine dioxygenase/porphobilinogen synthase |
| RA | 388,681 | A→C | 6.3% | intergenic (+35/+72) | tauD → / ← hemB | taurine dioxygenase/porphobilinogen synthase |
| RA | 394,632 | G→A | 5.0% | D43N (GAT→AAT) ‡ | iprA → | putative DNA‑binding transcriptional regulator IprA |
| RA | 394,633 | A→G | 5.0% | D43G (GAT→GGT) ‡ | iprA → | putative DNA‑binding transcriptional regulator IprA |
| RA | 394,636 | C→T | 5.0% | T44I (ACT→ATT) ‡ | iprA → | putative DNA‑binding transcriptional regulator IprA |
| RA | 394,637 | T→C | 5.2% | T44T (ACT→ACC) ‡ | iprA → | putative DNA‑binding transcriptional regulator IprA |
| RA | 430,506 | G→A | 5.3% | intergenic (+30/‑99) | secF → / → yajD | Sec translocon accessory complex subunit SecF/HNH nuclease family protein |
| RA | 430,509 | A→T | 6.2% | intergenic (+33/‑96) | secF → / → yajD | Sec translocon accessory complex subunit SecF/HNH nuclease family protein |
| RA | 430,510 | G→T | 5.4% | intergenic (+34/‑95) | secF → / → yajD | Sec translocon accessory complex subunit SecF/HNH nuclease family protein |
| RA | 430,511 | A→C | 5.3% | intergenic (+35/‑94) | secF → / → yajD | Sec translocon accessory complex subunit SecF/HNH nuclease family protein |
| RA | 430,512 | A→T | 5.5% | intergenic (+36/‑93) | secF → / → yajD | Sec translocon accessory complex subunit SecF/HNH nuclease family protein |
| RA | 430,515 | T→C | 5.5% | intergenic (+39/‑90) | secF → / → yajD | Sec translocon accessory complex subunit SecF/HNH nuclease family protein |
| RA | 431,107 | A→T | 6.3% | intergenic (+155/+22) | yajD → / ← tsx | HNH nuclease family protein/nucleoside‑specific channel‑forming protein Tsx |
| RA | 431,109 | A→T | 6.7% | intergenic (+157/+20) | yajD → / ← tsx | HNH nuclease family protein/nucleoside‑specific channel‑forming protein Tsx |
| RA | 431,111 | A→T | 6.5% | intergenic (+159/+18) | yajD → / ← tsx | HNH nuclease family protein/nucleoside‑specific channel‑forming protein Tsx |
| RA | 446,786 | C→T | 6.2% | intergenic (‑120/+29) | yajR ← / ← cyoE | putative major facilitator superfamily transport protein YajR/heme O synthase |
| RA | 446,787 | G→A | 6.0% | intergenic (‑121/+28) | yajR ← / ← cyoE | putative major facilitator superfamily transport protein YajR/heme O synthase |
| RA | 446,788 | T→C | 6.0% | intergenic (‑122/+27) | yajR ← / ← cyoE | putative major facilitator superfamily transport protein YajR/heme O synthase |
| RA | 446,789 | A→G | 6.0% | intergenic (‑123/+26) | yajR ← / ← cyoE | putative major facilitator superfamily transport protein YajR/heme O synthase |
| RA | 475,971 | C→G | 10.1% | intergenic (+20/+11) | ybaY → / ← atl | PF09619 family lipoprotein YbaY/DNA base‑flipping protein |
| RA | 475,972 | C→G | 10.8% | intergenic (+21/+10) | ybaY → / ← atl | PF09619 family lipoprotein YbaY/DNA base‑flipping protein |
| RA | 478,750 | C→T | 6.1% | intergenic (‑133/+31) | pdeB ← / ← ylaC | c‑di‑GMP phosphodiesterase PdeB/putative inner membrane protein |
| RA | 478,752 | G→A | 6.2% | intergenic (‑135/+29) | pdeB ← / ← ylaC | c‑di‑GMP phosphodiesterase PdeB/putative inner membrane protein |
| RA | 478,757 | T→C | 5.9% | intergenic (‑140/+24) | pdeB ← / ← ylaC | c‑di‑GMP phosphodiesterase PdeB/putative inner membrane protein |
| RA | 478,759 | A→G | 5.9% | intergenic (‑142/+22) | pdeB ← / ← ylaC | c‑di‑GMP phosphodiesterase PdeB/putative inner membrane protein |
| RA | 494,032 | A→T | 7.4% | intergenic (+9/‑44) | dnaX → / → ybaB | DNA polymerase III subunit tau/putative nucleoid‑associated protein YbaB |
| RA | 494,033 | C→G | 7.5% | intergenic (+10/‑43) | dnaX → / → ybaB | DNA polymerase III subunit tau/putative nucleoid‑associated protein YbaB |
| RA | 494,034 | A→T | 7.3% | intergenic (+11/‑42) | dnaX → / → ybaB | DNA polymerase III subunit tau/putative nucleoid‑associated protein YbaB |
| RA | 495,015 | A→G | 6.7% | intergenic (+5/‑105) | recR → / → htpG | DNA repair protein RecR/chaperone protein HtpG |
| RA | 495,026 | A→T | 8.5% | intergenic (+16/‑94) | recR → / → htpG | DNA repair protein RecR/chaperone protein HtpG |
| RA | 495,027 | T→G | 9.1% | intergenic (+17/‑93) | recR → / → htpG | DNA repair protein RecR/chaperone protein HtpG |
| RA | 495,028 | C→A | 9.6% | intergenic (+18/‑92) | recR → / → htpG | DNA repair protein RecR/chaperone protein HtpG |
| RA | 495,029 | A→T | 9.1% | intergenic (+19/‑91) | recR → / → htpG | DNA repair protein RecR/chaperone protein HtpG |
| RA | 495,040 | C→T | 8.8% | intergenic (+30/‑80) | recR → / → htpG | DNA repair protein RecR/chaperone protein HtpG |
| RA | 506,584 | T→C | 6.2% | intergenic (+18/+19) | ushA → / ← ybaK | 5'‑nucleotidase/UDP‑sugar hydrolase/Cys‑tRNA(Pro) and Cys‑tRNA(Cys) deacylase |
| RA | 506,585 | T→A | 6.2% | intergenic (+19/+18) | ushA → / ← ybaK | 5'‑nucleotidase/UDP‑sugar hydrolase/Cys‑tRNA(Pro) and Cys‑tRNA(Cys) deacylase |
| RA | 506,586 | T→A | 5.9% | intergenic (+20/+17) | ushA → / ← ybaK | 5'‑nucleotidase/UDP‑sugar hydrolase/Cys‑tRNA(Pro) and Cys‑tRNA(Cys) deacylase |
| RA | 506,587 | G→A | 6.0% | intergenic (+21/+16) | ushA → / ← ybaK | 5'‑nucleotidase/UDP‑sugar hydrolase/Cys‑tRNA(Pro) and Cys‑tRNA(Cys) deacylase |
| RA | 525,739 | G→C | 8.3% | E827Q (GAG→CAG) ‡ | rhsD → | protein RhsD |
| RA | 525,740 | A→T | 8.9% | E827V (GAG→GTG) ‡ | rhsD → | protein RhsD |
| RA | 525,741 | G→C | 8.3% | E827D (GAG→GAC) ‡ | rhsD → | protein RhsD |
| RA | 551,361 | G→A | 9.1% | intergenic (+29/+166) | ybcF → / ← purK | putative carbamate kinase/5‑(carboxyamino)imidazole ribonucleotide synthase |
| RA | 551,362 | C→A | 9.0% | intergenic (+30/+165) | ybcF → / ← purK | putative carbamate kinase/5‑(carboxyamino)imidazole ribonucleotide synthase |
| RA | 551,368 | T→G | 8.8% | intergenic (+36/+159) | ybcF → / ← purK | putative carbamate kinase/5‑(carboxyamino)imidazole ribonucleotide synthase |
| RA | 551,370 | G→C | 8.8% | intergenic (+38/+157) | ybcF → / ← purK | putative carbamate kinase/5‑(carboxyamino)imidazole ribonucleotide synthase |
| RA | 551,372 | C→A | 8.5% | intergenic (+40/+155) | ybcF → / ← purK | putative carbamate kinase/5‑(carboxyamino)imidazole ribonucleotide synthase |
| RA | 551,378 | T→G | 8.8% | intergenic (+46/+149) | ybcF → / ← purK | putative carbamate kinase/5‑(carboxyamino)imidazole ribonucleotide synthase |
| RA | 551,379 | T→C | 8.8% | intergenic (+47/+148) | ybcF → / ← purK | putative carbamate kinase/5‑(carboxyamino)imidazole ribonucleotide synthase |
| JC JC | 568,268 | IS1 (–) +9 bp | 100% | intergenic (+21/‑39) | renD → / → emrE | DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE |
| RA | 569,160 | G→T | 5.4% | D87Y (GAC→TAC) ‡ | ybcK → | DLP12 prophage; putative recombinase |
| RA | 569,161 | A→C | 5.3% | D87A (GAC→GCC) ‡ | ybcK → | DLP12 prophage; putative recombinase |
| RA | 574,494 | A→G | 10.7% | intergenic (+155/+35) | ybcQ → / ← nmpC | DLP12 prophage; putative antitermination protein/DLP12 prophage; putative outer membrane porin NmpC |
| RA | 574,495 | A→T | 10.5% | intergenic (+156/+34) | ybcQ → / ← nmpC | DLP12 prophage; putative antitermination protein/DLP12 prophage; putative outer membrane porin NmpC |
| RA | 574,496 | C→T | 10.7% | intergenic (+157/+33) | ybcQ → / ← nmpC | DLP12 prophage; putative antitermination protein/DLP12 prophage; putative outer membrane porin NmpC |
| RA | 585,866 | G→A | 5.2% | intergenic (‑233/+281) | ompT ← / ← envY | outer membrane protease VII (outer membrane protein 3b)/DNA‑binding transcriptional activator EnvY |
| RA | 594,946 | C→A | 9.4% | Q166H (CAG→CAT) ‡ | cusR ← | DNA‑binding transcriptional activator CusR |
| RA | 594,948 | G→C | 10.0% | Q166E (CAG→GAG) ‡ | cusR ← | DNA‑binding transcriptional activator CusR |
| RA | 594,950 | T→G | 9.5% | H165P (CAT→CCT) | cusR ← | DNA‑binding transcriptional activator CusR |
| RA | 595,519 | T→A | 6.7% | intergenic (‑76/‑81) | cusR ← / → cusC | DNA‑binding transcriptional activator CusR/copper/silver export system outer membrane channel |
| RA | 595,520 | T→A | 6.3% | intergenic (‑77/‑80) | cusR ← / → cusC | DNA‑binding transcriptional activator CusR/copper/silver export system outer membrane channel |
| RA | 603,391 | C→G | 9.6% | intergenic (+56/+25) | pheP → / ← ybdG | phenylalanine:H(+) symporter PheP/miniconductance mechanosensitive channel YbdG |
| RA | 603,393 | T→A | 9.6% | intergenic (+58/+23) | pheP → / ← ybdG | phenylalanine:H(+) symporter PheP/miniconductance mechanosensitive channel YbdG |
| RA | 603,395 | C→G | 9.6% | intergenic (+60/+21) | pheP → / ← ybdG | phenylalanine:H(+) symporter PheP/miniconductance mechanosensitive channel YbdG |
| RA | 622,455 | G→C | 7.2% | W52C (TGG→TGC) | entS → | enterobactin exporter EntS |
| RA | 645,069 | G→A | 6.2% | intergenic (‑66/+48) | rna ← / ← citT | RNase I/citrate:succinate antiporter |
| RA | 645,070 | G→A | 6.2% | intergenic (‑67/+47) | rna ← / ← citT | RNase I/citrate:succinate antiporter |
| RA | 645,073 | T→C | 6.2% | intergenic (‑70/+44) | rna ← / ← citT | RNase I/citrate:succinate antiporter |
| RA | 645,074 | T→C | 6.2% | intergenic (‑71/+43) | rna ← / ← citT | RNase I/citrate:succinate antiporter |
| RA | 672,113 | T→C | 5.7% | D25G (GAT→GGT) | lptE ← | lipopolysaccharide assembly protein LptE |
| RA | 691,390 | G→C | 8.1% | A132G (GCC→GGC) | ybeX ← | CorC‑HlyC family protein YbeX |
| RA | 710,914 | A→T | 5.2% | intergenic (‑189/+21) | uof ← / ← fldA | RyhB‑regulated fur leader peptide/flavodoxin 1 |
| RA | 710,915 | T→C | 5.5% | intergenic (‑190/+20) | uof ← / ← fldA | RyhB‑regulated fur leader peptide/flavodoxin 1 |
| RA | 710,916 | G→A | 5.5% | intergenic (‑191/+19) | uof ← / ← fldA | RyhB‑regulated fur leader peptide/flavodoxin 1 |
| RA | 710,917 | A→T | 5.5% | intergenic (‑192/+18) | uof ← / ← fldA | RyhB‑regulated fur leader peptide/flavodoxin 1 |
| RA | 721,011 | T→A | 9.3% | intergenic (+171/+45) | ybfK → / ← kdpE | uncharacterized protein YbfK/DNA‑binding transcriptional activator KdpE |
| RA | 752,065 | G→C | 6.3% | D35E (GAC→GAG) ‡ | ybgQ ← | putative fimbrial usher protein YbgQ |
| RA | 752,066 | T→G | 6.2% | D35A (GAC→GCC) ‡ | ybgQ ← | putative fimbrial usher protein YbgQ |
| RA | 752,067 | C→A | 5.9% | D35Y (GAC→TAC) ‡ | ybgQ ← | putative fimbrial usher protein YbgQ |
| RA | 752,068 | G→C | 6.4% | R34R (CGC→CGG) | ybgQ ← | putative fimbrial usher protein YbgQ |
| RA | 762,876 | G→T | 6.0% | intergenic (+137/‑138) | sucB → / → sucC | dihydrolipoyltranssuccinylase/succinyl‑CoA synthetase subunit beta |
| RA | 762,877 | C→T | 6.0% | intergenic (+138/‑137) | sucB → / → sucC | dihydrolipoyltranssuccinylase/succinyl‑CoA synthetase subunit beta |
| RA | 773,553 | T→C | 5.9% | L171P (CTG→CCG) | cydB → | cytochrome bd‑I ubiquinol oxidase subunit II |
| RA | 777,621 | T→C | 5.0% | intergenic (+14/‑119) | tolA → / → tolB | Tol‑Pal system protein TolA/Tol‑Pal system periplasmic protein TolB |
| RA | 777,624 | T→C | 5.2% | intergenic (+17/‑116) | tolA → / → tolB | Tol‑Pal system protein TolA/Tol‑Pal system periplasmic protein TolB |
| RA | 777,627 | G→A | 5.2% | intergenic (+20/‑113) | tolA → / → tolB | Tol‑Pal system protein TolA/Tol‑Pal system periplasmic protein TolB |
| RA | 777,630 | G→A | 5.3% | intergenic (+23/‑110) | tolA → / → tolB | Tol‑Pal system protein TolA/Tol‑Pal system periplasmic protein TolB |
| RA | 801,861 | G→C | 5.2% | intergenic (+50/‑26) | ybhH → / → ybhI | putative isomerase YbhH/putative tricarboxylate transporter |
| RA | 805,959 | A→G | 5.3% | intergenic (+195/+39) | ybhJ → / ← ybhC | putative hydratase YbhJ/outer membrane lipoprotein YhbC |
| RA | 805,960 | A→C | 5.4% | intergenic (+196/+38) | ybhJ → / ← ybhC | putative hydratase YbhJ/outer membrane lipoprotein YhbC |
| RA | 805,966 | T→A | 5.1% | intergenic (+202/+32) | ybhJ → / ← ybhC | putative hydratase YbhJ/outer membrane lipoprotein YhbC |
| RA | 805,967 | T→A | 5.1% | intergenic (+203/+31) | ybhJ → / ← ybhC | putative hydratase YbhJ/outer membrane lipoprotein YhbC |
| RA | 805,973 | G→T | 5.2% | intergenic (+209/+25) | ybhJ → / ← ybhC | putative hydratase YbhJ/outer membrane lipoprotein YhbC |
| RA | 805,974 | C→T | 5.2% | intergenic (+210/+24) | ybhJ → / ← ybhC | putative hydratase YbhJ/outer membrane lipoprotein YhbC |
| RA | 808,013 | Δ1 bp | 8.5% | coding (1245/1290 nt) | bioA ← | adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase |
| RA | 808,430 | T→A | 6.4% | L276F (TTA→TTT) | bioA ← | adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase |
| RA | 808,434 | G→C | 6.4% | A275G (GCC→GGC) | bioA ← | adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase |
| RA | 808,438 | T→A | 6.4% | K274* (AAA→TAA) | bioA ← | adenosylmethionine‑8‑amino‑7‑oxononanoate aminotransferase |
| RA | 812,768 | G→A | 5.9% | G167R (GGA→AGA) | bioD → | dethiobiotin synthetase |
| RA | 812,771 | C→G | 5.9% | L168V (CTG→GTG) ‡ | bioD → | dethiobiotin synthetase |
| RA | 812,773 | G→C | 5.9% | L168L (CTG→CTC) ‡ | bioD → | dethiobiotin synthetase |
| RA | 812,775 | C→G | 6.0% | T169S (ACT→AGT) | bioD → | dethiobiotin synthetase |
| RA | 812,778 | T→C | 5.9% | L170P (CTG→CCG) | bioD → | dethiobiotin synthetase |
| RA | 824,572 | T→A | 6.9% | intergenic (‑75/‑58) | ybhP ← / → ybhQ | endonuclease/exonuclease/phosphatase domain‑containing protein YbhP/putative inner membrane protein |
| RA | 824,573 | T→A | 6.9% | intergenic (‑76/‑57) | ybhP ← / → ybhQ | endonuclease/exonuclease/phosphatase domain‑containing protein YbhP/putative inner membrane protein |
| RA | 828,749 | A→T | 5.4% | L78Q (CTG→CAG) | ybhF ← | putative ABC exporter ATP binding subunit |
| RA | 830,666 | A→T | 5.4% | intergenic (‑23/‑206) | cecR ← / → rhlE | DNA‑binding transcriptional dual regulator CecR/ATP‑dependent RNA helicase RhlE |
| RA | 830,667 | T→C | 5.6% | intergenic (‑24/‑205) | cecR ← / → rhlE | DNA‑binding transcriptional dual regulator CecR/ATP‑dependent RNA helicase RhlE |
| RA | 830,668 | G→A | 5.7% | intergenic (‑25/‑204) | cecR ← / → rhlE | DNA‑binding transcriptional dual regulator CecR/ATP‑dependent RNA helicase RhlE |
| RA | 830,669 | A→T | 5.6% | intergenic (‑26/‑203) | cecR ← / → rhlE | DNA‑binding transcriptional dual regulator CecR/ATP‑dependent RNA helicase RhlE |
| RA | 856,833 | A→T | 5.5% | K291* (AAA→TAA) | ybiT → | ABC transporter ATP‑binding protein YbiT |
| RA | 858,420 | A→C | 8.4% | L214L (CTT→CTG) ‡ | ybiU ← | DUF1479 domain‑containing protein YbiU |
| RA | 858,421 | A→T | 8.0% | L214H (CTT→CAT) ‡ | ybiU ← | DUF1479 domain‑containing protein YbiU |
| RA | 858,424 | A→T | 8.1% | L213Q (CTG→CAG) ‡ | ybiU ← | DUF1479 domain‑containing protein YbiU |
| RA | 858,425 | G→T | 8.1% | L213M (CTG→ATG) ‡ | ybiU ← | DUF1479 domain‑containing protein YbiU |
| RA | 860,151 | A→G | 7.1% | intergenic (‑123/+23) | ybiV ← / ← ybiW | sugar phosphatase/putative pyruvate formate lyase |
| RA | 860,154 | A→T | 7.1% | intergenic (‑126/+20) | ybiV ← / ← ybiW | sugar phosphatase/putative pyruvate formate lyase |
| RA | 860,157 | C→T | 6.8% | intergenic (‑129/+17) | ybiV ← / ← ybiW | sugar phosphatase/putative pyruvate formate lyase |
| RA | 897,968:1 | +A | 9.6% | intergenic (+39/‑21) | potI → / → ybjO | putrescine ABC transporter membrane subunit PotI/putative inner membrane protein |
| RA | 897,973 | Δ1 bp | 9.1% | intergenic (+44/‑16) | potI → / → ybjO | putrescine ABC transporter membrane subunit PotI/putative inner membrane protein |
| RA | 900,201 | T→G | 5.0% | K125N (AAA→AAC) | artJ ← | L‑arginine ABC transporter periplasmic binding protein |
| RA | 922,314:1 | +C | 5.8% | intergenic (+21/+52) | macB → / ← cspD | ABC‑type tripartite efflux pump ATP binding/membrane subunit/DNA replication inhibitor |
| RA | 933,156 | G→A | 5.2% | intergenic (+67/‑68) | lrp → / → ftsK | DNA‑binding transcriptional dual regulator Lrp/cell division DNA translocase FtsK |
| RA | 933,159 | G→T | 5.2% | intergenic (+70/‑65) | lrp → / → ftsK | DNA‑binding transcriptional dual regulator Lrp/cell division DNA translocase FtsK |
| RA | 940,751 | T→C | 7.5% | intergenic (+31/‑208) | serS → / → dmsA | serine‑‑tRNA ligase/dimethyl sulfoxide reductase subunit A |
| RA | 940,754 | G→A | 7.6% | intergenic (+34/‑205) | serS → / → dmsA | serine‑‑tRNA ligase/dimethyl sulfoxide reductase subunit A |
| RA | 950,648 | C→T | 5.2% | V145I (GTT→ATT) | pflA ← | pyruvate formate‑lyase activating enzyme |
| RA | 953,720 | A→T | 7.4% | N249K (AAT→AAA) | focA ← | formate channel FocA |
| RA | 963,761 | T→C | 7.7% | intergenic (+93/‑67) | rpsA → / → ihfB | 30S ribosomal subunit protein S1/integration host factor subunit beta |
| RA | 963,762 | A→G | 7.7% | intergenic (+94/‑66) | rpsA → / → ihfB | 30S ribosomal subunit protein S1/integration host factor subunit beta |
| RA | 963,763 | C→T | 7.8% | intergenic (+95/‑65) | rpsA → / → ihfB | 30S ribosomal subunit protein S1/integration host factor subunit beta |
| RA | 963,764 | G→A | 7.7% | intergenic (+96/‑64) | rpsA → / → ihfB | 30S ribosomal subunit protein S1/integration host factor subunit beta |
| RA | 975,701 | A→C | 6.0% | D27A (GAC→GCC) | mukE → | chromosome partitioning protein MukE |
| RA | 993,254 | A→G | 6.1% | intergenic (+20/+23) | pepN → / ← ssuB | aminopeptidase N/aliphatic sulfonate ABC transporter ATP binding subunit |
| RA | 993,255 | A→C | 6.1% | intergenic (+21/+22) | pepN → / ← ssuB | aminopeptidase N/aliphatic sulfonate ABC transporter ATP binding subunit |
| RA | 993,258 | G→T | 6.1% | intergenic (+24/+19) | pepN → / ← ssuB | aminopeptidase N/aliphatic sulfonate ABC transporter ATP binding subunit |
| RA | 993,259 | C→T | 6.3% | intergenic (+25/+18) | pepN → / ← ssuB | aminopeptidase N/aliphatic sulfonate ABC transporter ATP binding subunit |
| RA | 1,004,746 | C→A | 7.7% | intergenic (+89/‑22) | ycbF → / → pyrD | putative fimbrial chaperone YcbF/dihydroorotate dehydrogenase, type 2 |
| RA | 1,011,926 | G→A | 6.2% | intergenic (+55/‑75) | uup → / → pqiA | ATP‑binding protein with possible role in replication/intermembrane transport protein PqiA |
| RA | 1,011,930 | T→C | 6.1% | intergenic (+59/‑71) | uup → / → pqiA | ATP‑binding protein with possible role in replication/intermembrane transport protein PqiA |
| RA | 1,011,931 | G→C | 6.3% | intergenic (+60/‑70) | uup → / → pqiA | ATP‑binding protein with possible role in replication/intermembrane transport protein PqiA |
| RA | 1,011,932 | G→A | 6.2% | intergenic (+61/‑69) | uup → / → pqiA | ATP‑binding protein with possible role in replication/intermembrane transport protein PqiA |
| RA | 1,011,936 | T→C | 6.3% | intergenic (+65/‑65) | uup → / → pqiA | ATP‑binding protein with possible role in replication/intermembrane transport protein PqiA |
| RA | 1,018,249 | G→C | 7.2% | S17R (AGC→AGG) ‡ | ycbZ ← | putative ATP‑dependent protease YcbZ |
| RA | 1,018,251 | T→G | 7.2% | S17R (AGC→CGC) ‡ | ycbZ ← | putative ATP‑dependent protease YcbZ |
| RA | 1,018,254 | C→A | 7.2% | D16Y (GAT→TAT) | ycbZ ← | putative ATP‑dependent protease YcbZ |
| RA | 1,018,256 | G→C | 7.5% | T15S (ACC→AGC) | ycbZ ← | putative ATP‑dependent protease YcbZ |
| RA | 1,018,986 | A→T | 5.1% | intergenic (+49/+27) | matP → / ← ompA | macrodomain Ter protein/outer membrane porin A |
| RA | 1,030,720 | C→T | 5.4% | intergenic (‑52/+39) | tusE ← / ← yccA | sulfur transfer protein TusE/modulator of FtsH protease |
| RA | 1,030,724 | A→T | 5.4% | intergenic (‑56/+35) | tusE ← / ← yccA | sulfur transfer protein TusE/modulator of FtsH protease |
| RA | 1,030,726 | A→T | 5.5% | intergenic (‑58/+33) | tusE ← / ← yccA | sulfur transfer protein TusE/modulator of FtsH protease |
| RA | 1,030,728 | A→T | 5.6% | intergenic (‑60/+31) | tusE ← / ← yccA | sulfur transfer protein TusE/modulator of FtsH protease |
| RA | 1,030,732 | A→G | 5.6% | intergenic (‑64/+27) | tusE ← / ← yccA | sulfur transfer protein TusE/modulator of FtsH protease |
| RA | 1,035,144 | Δ1 bp | 6.0% | coding (79/708 nt) | hyaC → | hydrogenase 1 cytochrome b subunit |
| RA | 1,036,090 | G→A | 5.1% | A107A (GCG→GCA) | hyaD → | putative hydrogenase 1 maturation protease HyaD |
| RA | 1,036,094 | A→G | 5.1% | I109V (ATC→GTC) | hyaD → | putative hydrogenase 1 maturation protease HyaD |
| RA | 1,038,378 | C→T | 5.5% | R213R (CGC→CGT) | appC → | cytochrome bd‑II ubiquinol oxidase subunit I |
| RA | 1,038,383 | T→C | 5.4% | V215A (GTC→GCC) ‡ | appC → | cytochrome bd‑II ubiquinol oxidase subunit I |
| RA | 1,038,384 | C→G | 5.3% | V215V (GTC→GTG) ‡ | appC → | cytochrome bd‑II ubiquinol oxidase subunit I |
| RA | 1,038,385 | G→A | 5.3% | A216T (GCA→ACA) | appC → | cytochrome bd‑II ubiquinol oxidase subunit I |
| RA | 1,038,390 | A→G | 6.4% | L217L (TTA→TTG) | appC → | cytochrome bd‑II ubiquinol oxidase subunit I |
| RA | 1,043,503 | A→C | 5.9% | G236G (GGT→GGG) | etk ← | protein‑tyrosine kinase Etk |
| RA | 1,113,492 | A→G | 6.3% | intergenic (+86/‑87) | opgH → / → yceK | osmoregulated periplasmic glucans (OPGs) biosynthesis protein H/DUF1375 domain‑containing lipoprotein YceK |
| RA | 1,113,493 | A→C | 6.4% | intergenic (+87/‑86) | opgH → / → yceK | osmoregulated periplasmic glucans (OPGs) biosynthesis protein H/DUF1375 domain‑containing lipoprotein YceK |
| RA | 1,116,857 | G→T | 6.6% | M17I (ATG→ATT) | yceA → | UPF0176 protein YceA |
| RA | 1,129,394 | G→C | 13.6% | intergenic (+20/+20) | murJ → / ← flgN | putative lipid II flippase MurJ/flagellar biosynthesis protein FlgN |
| RA | 1,134,661 | A→G | 6.1% | intergenic (+104/‑68) | flgF → / → flgG | flagellar basal‑body rod protein FlgF/flagellar basal‑body rod protein FlgG |
| RA | 1,134,662 | A→C | 6.1% | intergenic (+105/‑67) | flgF → / → flgG | flagellar basal‑body rod protein FlgF/flagellar basal‑body rod protein FlgG |
| RA | 1,134,668 | T→A | 6.5% | intergenic (+111/‑61) | flgF → / → flgG | flagellar basal‑body rod protein FlgF/flagellar basal‑body rod protein FlgG |
| RA | 1,134,669 | T→A | 5.9% | intergenic (+112/‑60) | flgF → / → flgG | flagellar basal‑body rod protein FlgF/flagellar basal‑body rod protein FlgG |
| RA | 1,134,675 | G→T | 6.6% | intergenic (+118/‑54) | flgF → / → flgG | flagellar basal‑body rod protein FlgF/flagellar basal‑body rod protein FlgG |
| RA | 1,134,676 | C→T | 6.2% | intergenic (+119/‑53) | flgF → / → flgG | flagellar basal‑body rod protein FlgF/flagellar basal‑body rod protein FlgG |
| RA | 1,136,026 | G→T | 10.1% | V155L (GTA→TTA) ‡ | flgH → | flagellar L‑ring protein |
| RA | 1,136,027 | T→A | 9.4% | V155E (GTA→GAA) ‡ | flgH → | flagellar L‑ring protein |
| RA | 1,136,028 | A→C | 9.3% | V155V (GTA→GTC) ‡ | flgH → | flagellar L‑ring protein |
| RA | 1,141,148 | C→T | 5.4% | intergenic (+162/+34) | flgL → / ← rne | flagellar hook‑filament junction protein 2/ribonuclease E |
| RA | 1,141,150 | G→A | 5.5% | intergenic (+164/+32) | flgL → / ← rne | flagellar hook‑filament junction protein 2/ribonuclease E |
| RA | 1,141,151 | T→C | 5.6% | intergenic (+165/+31) | flgL → / ← rne | flagellar hook‑filament junction protein 2/ribonuclease E |
| RA | 1,141,153 | A→G | 5.7% | intergenic (+167/+29) | flgL → / ← rne | flagellar hook‑filament junction protein 2/ribonuclease E |
| RA | 1,141,922 | G→T | 5.7% | R816S (CGT→AGT) | rne ← | ribonuclease E |
| RA | 1,141,925 | A→C | 5.7% | Y815D (TAT→GAT) | rne ← | ribonuclease E |
| RA | 1,146,736 | A→G | 7.9% | noncoding (148/169 nt) | sraB → | small RNA SraB |
| RA | 1,146,739 | A→T | 8.5% | noncoding (151/169 nt) | sraB → | small RNA SraB |
| RA | 1,146,740 | C→G | 8.0% | noncoding (152/169 nt) | sraB → | small RNA SraB |
| RA | 1,146,741 | A→T | 7.7% | noncoding (153/169 nt) | sraB → | small RNA SraB |
| RA | 1,146,744 | C→T | 7.9% | noncoding (156/169 nt) | sraB → | small RNA SraB |
| RA | 1,147,980 | G→T | 6.4% | K120N (AAG→AAT) | plsX → | putative phosphate acyltransferase |
| RA | 1,147,986 | G→C | 6.4% | L122L (CTG→CTC) | plsX → | putative phosphate acyltransferase |
| RA | 1,147,987 | G→C | 6.4% | E123Q (GAG→CAG) | plsX → | putative phosphate acyltransferase |
| RA | 1,147,993 | A→C | 5.9% | I125L (ATT→CTT) | plsX → | putative phosphate acyltransferase |
| RA | 1,153,208 | T→C | 7.3% | intergenic (+28/‑92) | fabF → / → pabC | beta‑ketoacyl‑[acyl carrier protein] synthase II/aminodeoxychorismate lyase |
| RA | 1,153,213 | T→A | 7.4% | intergenic (+33/‑87) | fabF → / → pabC | beta‑ketoacyl‑[acyl carrier protein] synthase II/aminodeoxychorismate lyase |
| RA | 1,153,214 | T→A | 7.4% | intergenic (+34/‑86) | fabF → / → pabC | beta‑ketoacyl‑[acyl carrier protein] synthase II/aminodeoxychorismate lyase |
| RA | 1,153,219 | G→A | 7.6% | intergenic (+39/‑81) | fabF → / → pabC | beta‑ketoacyl‑[acyl carrier protein] synthase II/aminodeoxychorismate lyase |
| RA | 1,157,633 | A→T | 5.8% | intergenic (+59/‑236) | ycfH → / → ptsG | putative metal‑dependent hydrolase YcfH/glucose‑specific PTS enzyme IIBC component |
| RA | 1,159,335 | G→T | 7.9% | intergenic (+33/+27) | ptsG → / ← fhuE | glucose‑specific PTS enzyme IIBC component/ferric coprogen/ferric rhodotorulic acid outer membrane transporter |
| RA | 1,159,336 | A→C | 7.9% | intergenic (+34/+26) | ptsG → / ← fhuE | glucose‑specific PTS enzyme IIBC component/ferric coprogen/ferric rhodotorulic acid outer membrane transporter |
| RA | 1,174,077 | G→A | 8.2% | intergenic (‑113/+15) | mfd ← / ← ycfT | transcription‑repair coupling factor/inner membrane protein YcfT |
| RA | 1,174,080 | T→C | 8.2% | intergenic (‑116/+12) | mfd ← / ← ycfT | transcription‑repair coupling factor/inner membrane protein YcfT |
| RA | 1,194,645:1 | +A | 5.1% | coding (307/654 nt) | rluE ← | 23S rRNA pseudouridine(2457) synthase |
| RA | 1,211,610 | A→G | 5.5% | intergenic (+33/+70) | icdC → / ← iraM | protein IcdC/anti‑adaptor protein IraM, inhibitor of sigma(S) proteolysis |
| RA | 1,211,612 | A→T | 5.2% | intergenic (+35/+68) | icdC → / ← iraM | protein IcdC/anti‑adaptor protein IraM, inhibitor of sigma(S) proteolysis |
| RA | 1,211,614 | C→T | 5.3% | intergenic (+37/+66) | icdC → / ← iraM | protein IcdC/anti‑adaptor protein IraM, inhibitor of sigma(S) proteolysis |
| RA | 1,212,470 | A→C | 6.0% | intergenic (‑166/+70) | ymgK ← / ← ymgL | protein YmgK/protein YmgL |
| RA | 1,212,475 | T→C | 6.2% | intergenic (‑171/+65) | ymgK ← / ← ymgL | protein YmgK/protein YmgL |
| RA | 1,212,476 | G→C | 6.2% | intergenic (‑172/+64) | ymgK ← / ← ymgL | protein YmgK/protein YmgL |
| RA | 1,212,477 | G→A | 6.0% | intergenic (‑173/+63) | ymgK ← / ← ymgL | protein YmgK/protein YmgL |
| RA | 1,212,482 | G→T | 7.4% | intergenic (‑178/+58) | ymgK ← / ← ymgL | protein YmgK/protein YmgL |
| RA | 1,217,099 | T→C | 6.0% | intergenic (+103/‑229) | ymgC → / → pdeG | protein YmgC/putative c‑di‑GMP phosphodiesterase PdeG |
| RA | 1,217,116 | T→G | 6.3% | intergenic (+120/‑212) | ymgC → / → pdeG | protein YmgC/putative c‑di‑GMP phosphodiesterase PdeG |
| RA | 1,217,119 | C→A | 5.0% | intergenic (+123/‑209) | ymgC → / → pdeG | protein YmgC/putative c‑di‑GMP phosphodiesterase PdeG |
| RA | 1,226,832 | T→G | 6.3% | F78C (TTT→TGT) | ycgJ → | PF05666 family protein YcgJ |
| RA | 1,226,835 | C→A | 6.3% | T79K (ACA→AAA) | ycgJ → | PF05666 family protein YcgJ |
| RA | 1,233,154 | T→A | 6.6% | intergenic (‑124/+22) | dsbB ← / ← nhaB | protein thiol:quinone oxidoreductase DsbB/Na(+):H(+) antiporter NhaB |
| RA | 1,233,157 | T→A | 6.3% | intergenic (‑127/+19) | dsbB ← / ← nhaB | protein thiol:quinone oxidoreductase DsbB/Na(+):H(+) antiporter NhaB |
| RA | 1,248,064 | T→A | 5.5% | K351* (AAA→TAA) | dhaM ← | dihydroxyacetone kinase subunit M |
| RA | 1,260,904 | A→G | 5.1% | intergenic (‑101/+24) | dauA ← / ← prs | aerobic C4‑dicarboxylate transporter DauA/ribose‑phosphate diphosphokinase |
| RA | 1,287,122 | T→G | 7.6% | noncoding (115/171 nt) R19R (AGG→CGG) |
rttR ← tpr ← |
small RNA RttR protamine‑like protein |
| RA | 1,287,123 | G→C | 7.1% | noncoding (114/171 nt) R18R (CGC→CGG) ‡ |
rttR ← tpr ← |
small RNA RttR protamine‑like protein |
| RA | 1,287,124 | C→A | 7.1% | noncoding (113/171 nt) R18L (CGC→CTC) ‡ |
rttR ← tpr ← |
small RNA RttR protamine‑like protein |
| RA | 1,287,149 | G→A | 6.8% | noncoding (88/171 nt) R10* (CGA→TGA) |
rttR ← tpr ← |
small RNA RttR protamine‑like protein |
| JC JC | 1,293,032 | IS1 (–) +8 bp | 100% | intergenic (‑110/‑488) | hns ← / → tdk | DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase |
| RA | 1,306,787 | G→A | 5.5% | intergenic (+19/+34) | oppF → / ← yciU | murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF/DUF440 domain‑containing protein YciU |
| RA | 1,306,788 | T→C | 5.6% | intergenic (+20/+33) | oppF → / ← yciU | murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF/DUF440 domain‑containing protein YciU |
| RA | 1,311,286 | G→T | 6.2% | E66D (GAG→GAT) | tonB → | Ton complex subunit TonB |
| RA | 1,311,830 | A→G | 8.3% | intergenic (+22/+18) | tonB → / ← yciA | Ton complex subunit TonB/acyl‑CoA thioesterase |
| RA | 1,311,831 | C→T | 7.9% | intergenic (+23/+17) | tonB → / ← yciA | Ton complex subunit TonB/acyl‑CoA thioesterase |
| RA | 1,314,682 | A→T | 5.0% | intergenic (+24/+36) | ompW → / ← yciE | outer membrane protein W/DUF892 domain‑containing protein YciE |
| RA | 1,324,837 | A→C | 9.3% | Y31S (TAT→TCT) ‡ | yciQ → | DUF2207 domain‑containing protein YciQ |
| RA | 1,324,838 | T→A | 9.3% | Y31* (TAT→TAA) ‡ | yciQ → | DUF2207 domain‑containing protein YciQ |
| RA | 1,324,839 | G→T | 9.9% | E32* (GAA→TAA) | yciQ → | DUF2207 domain‑containing protein YciQ |
| RA | 1,330,396:1 | +T | 8.7% | intergenic (+15/+21) | sohB → / ← yciN | S49 peptidase family protein/protein YciN |
| RA | 1,330,399 | A→T | 8.7% | intergenic (+18/+18) | sohB → / ← yciN | S49 peptidase family protein/protein YciN |
| RA | 1,330,402 | Δ1 bp | 8.5% | intergenic (+21/+15) | sohB → / ← yciN | S49 peptidase family protein/protein YciN |
| RA | 1,344,033 | A→G | 6.7% | L105P (CTG→CCG) | yciT ← | putative DNA‑binding transcriptional regulator YciT |
| RA | 1,344,036 | G→C | 6.7% | T104S (ACT→AGT) | yciT ← | putative DNA‑binding transcriptional regulator YciT |
| RA | 1,344,039 | C→T | 6.5% | R103Q (CGG→CAG) | yciT ← | putative DNA‑binding transcriptional regulator YciT |
| RA | 1,351,222 | T→G | 5.7% | intergenic (‑183/+185) | fabI ← / ← ycjD | enoyl‑[acyl‑carrier‑protein] reductase/DUF559 domain‑containing protein YcjD |
| RA | 1,351,227 | A→T | 5.4% | intergenic (‑188/+180) | fabI ← / ← ycjD | enoyl‑[acyl‑carrier‑protein] reductase/DUF559 domain‑containing protein YcjD |
| RA | 1,351,228 | G→C | 5.4% | intergenic (‑189/+179) | fabI ← / ← ycjD | enoyl‑[acyl‑carrier‑protein] reductase/DUF559 domain‑containing protein YcjD |
| RA | 1,351,229 | A→T | 5.4% | intergenic (‑190/+178) | fabI ← / ← ycjD | enoyl‑[acyl‑carrier‑protein] reductase/DUF559 domain‑containing protein YcjD |
| RA | 1,351,234 | C→A | 5.9% | intergenic (‑195/+173) | fabI ← / ← ycjD | enoyl‑[acyl‑carrier‑protein] reductase/DUF559 domain‑containing protein YcjD |
| RA | 1,376,952 | T→A | 7.2% | C41S (TGT→AGT) | ycjS → | putative oxidoreductase YcjS |
| RA | 1,388,283 | C→T | 10.5% | intergenic (+22/+22) | tyrR → / ← tpx | DNA‑binding transcriptional dual regulator TyrR/lipid hydroperoxide peroxidase |
| RA | 1,388,284 | A→T | 9.9% | intergenic (+23/+21) | tyrR → / ← tpx | DNA‑binding transcriptional dual regulator TyrR/lipid hydroperoxide peroxidase |
| RA | 1,388,285 | A→G | 10.6% | intergenic (+24/+20) | tyrR → / ← tpx | DNA‑binding transcriptional dual regulator TyrR/lipid hydroperoxide peroxidase |
| RA | 1,397,643 | C→A | 5.4% | intergenic (+21/+29) | ynaJ → / ← uspE | DUF2534 domain‑containing protein YnaJ/universal stress protein with a role cellular motility |
| RA | 1,410,940 | G→A | 6.2% | intergenic (+56/+73) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,941 | C→A | 7.0% | intergenic (+57/+72) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,947 | T→G | 7.9% | intergenic (+63/+66) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,949 | G→C | 7.1% | intergenic (+65/+64) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,951 | C→A | 8.3% | intergenic (+67/+62) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,957 | T→G | 6.8% | intergenic (+73/+56) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,958 | T→C | 7.6% | intergenic (+74/+55) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,986 | A→G | 6.0% | intergenic (+102/+27) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,990 | T→A | 6.0% | intergenic (+106/+23) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,991 | T→A | 6.0% | intergenic (+107/+22) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,410,995 | C→T | 6.2% | intergenic (+111/+18) | dbpA → / ← ttcA | ATP‑dependent RNA helicase DbpA/tRNA cytosine(32) 2‑sulfurtransferase TtcA |
| RA | 1,426,418 | T→G | 5.0% | intergenic (+438/‑36) | ydaY → / → ynaA | Rac prophage; putative uncharacterized protein YdaY/Rac prophage; putative prophage tail length tape measure domain‑containing protein YnaA |
| RA | 1,426,421 | C→A | 5.1% | intergenic (+441/‑33) | ydaY → / → ynaA | Rac prophage; putative uncharacterized protein YdaY/Rac prophage; putative prophage tail length tape measure domain‑containing protein YnaA |
| RA | 1,426,422 | G→A | 5.0% | intergenic (+442/‑32) | ydaY → / → ynaA | Rac prophage; putative uncharacterized protein YdaY/Rac prophage; putative prophage tail length tape measure domain‑containing protein YnaA |
| RA | 1,429,019 | G→T | 6.3% | intergenic (+35/‑30) | lomR → / → stfR | Rac prophage; protein LomR_1/Rac prophage; putative membrane protein |
| RA | 1,429,022 | T→A | 5.5% | intergenic (+38/‑27) | lomR → / → stfR | Rac prophage; protein LomR_1/Rac prophage; putative membrane protein |
| RA | 1,429,024 | A→C | 6.1% | intergenic (+40/‑25) | lomR → / → stfR | Rac prophage; protein LomR_1/Rac prophage; putative membrane protein |
| RA | 1,441,833 | G→C | 5.7% | intergenic (‑90/+21) | hslJ ← / ← ldhA | lipoprotein implicated in Novobiocin resistance/D‑lactate dehydrogenase |
| RA | 1,441,835 | A→T | 5.9% | intergenic (‑92/+19) | hslJ ← / ← ldhA | lipoprotein implicated in Novobiocin resistance/D‑lactate dehydrogenase |
| RA | 1,441,837 | G→C | 5.8% | intergenic (‑94/+17) | hslJ ← / ← ldhA | lipoprotein implicated in Novobiocin resistance/D‑lactate dehydrogenase |
| RA | 1,446,357:1 | +T | 7.5% | intergenic (+151/+21) | ydbL → / ← feaR | DUF1318 domain‑containing protein YdbL/DNA‑binding transcriptional activator FeaR |
| RA | 1,446,362 | Δ1 bp | 7.7% | intergenic (+156/+16) | ydbL → / ← feaR | DUF1318 domain‑containing protein YdbL/DNA‑binding transcriptional activator FeaR |
| RA | 1,446,785 | T→A | 7.0% | T167S (ACA→TCA) | feaR ← | DNA‑binding transcriptional activator FeaR |
| RA | 1,446,786 | T→A | 7.0% | E166D (GAA→GAT) ‡ | feaR ← | DNA‑binding transcriptional activator FeaR |
| RA | 1,446,787 | T→A | 7.2% | E166V (GAA→GTA) ‡ | feaR ← | DNA‑binding transcriptional activator FeaR |
| RA | 1,449,050 | T→A | 5.6% | intergenic (+32/+26) | feaB → / ← tynA | phenylacetaldehyde dehydrogenase/copper‑containing amine oxidase |
| RA | 1,466,345 | T→C | 5.1% | pseudogene (954/2518 nt) | ydbA → | putative outer membrane protein, N‑terminal fragment |
| RA | 1,483,342 | G→C | 5.2% | Q94H (CAG→CAC) | hrpA → | ATP‑dependent RNA helicase HrpA |
| RA | 1,483,343 | G→C | 5.2% | V95L (GTG→CTG) | hrpA → | ATP‑dependent RNA helicase HrpA |
| RA | 1,491,904 | A→T | 6.0% | intergenic (+54/+18) | ydcA → / ← hokB | protein YdcA/toxin HokB |
| RA | 1,491,905 | A→T | 6.0% | intergenic (+55/+17) | ydcA → / ← hokB | protein YdcA/toxin HokB |
| RA | 1,491,906 | A→T | 6.0% | intergenic (+56/+16) | ydcA → / ← hokB | protein YdcA/toxin HokB |
| RA | 1,499,361 | A→G | 5.6% | N142D (AAC→GAC) | rimL → | ribosomal‑protein‑L12‑serine acetyltransferase |
| RA | 1,499,365 | A→T | 6.1% | Q143L (CAG→CTG) | rimL → | ribosomal‑protein‑L12‑serine acetyltransferase |
| RA | 1,499,369 | C→T | 5.5% | V144V (GTC→GTT) | rimL → | ribosomal‑protein‑L12‑serine acetyltransferase |
| RA | 1,530,490 | T→C | 7.9% | T5T (ACA→ACG) | yncO ← | protein YncO |
| RA | 1,530,496 | G→T | 8.3% | Y3* (TAC→TAA) | yncO ← | protein YncO |
| RA | 1,530,499 | A→C | 8.2% | I2M (ATT→ATG) | yncO ← | protein YncO |
| RA | 1,530,505 | G→A | 8.4% | intergenic (‑1/‑81) | yncO ← / → yncI | protein YncO/putative transposase YncI |
| RA | 1,540,645 | G→C | 5.2% | A649G (GCC→GGC) ‡ | narZ ← | nitrate reductase Z subunit alpha |
| RA | 1,540,646 | C→G | 5.1% | A649P (GCC→CCC) ‡ | narZ ← | nitrate reductase Z subunit alpha |
| RA | 1,540,647 | G→C | 5.1% | R648R (CGC→CGG) | narZ ← | nitrate reductase Z subunit alpha |
| RA | 1,552,191 | C→A | 10.8% | intergenic (+200/+207) | fdnI → / ← yddM | formate dehydrogenase N subunit gamma/putative DNA‑binding transcriptional regulator YddM |
| RA | 1,552,256 | G→A | 10.7% | intergenic (+265/+142) | fdnI → / ← yddM | formate dehydrogenase N subunit gamma/putative DNA‑binding transcriptional regulator YddM |
| RA | 1,552,257 | C→A | 11.2% | intergenic (+266/+141) | fdnI → / ← yddM | formate dehydrogenase N subunit gamma/putative DNA‑binding transcriptional regulator YddM |
| RA | 1,552,263 | G→T | 11.6% | intergenic (+272/+135) | fdnI → / ← yddM | formate dehydrogenase N subunit gamma/putative DNA‑binding transcriptional regulator YddM |
| RA | 1,552,264 | A→C | 10.0% | intergenic (+273/+134) | fdnI → / ← yddM | formate dehydrogenase N subunit gamma/putative DNA‑binding transcriptional regulator YddM |
| RA | 1,552,270 | T→G | 10.0% | intergenic (+279/+128) | fdnI → / ← yddM | formate dehydrogenase N subunit gamma/putative DNA‑binding transcriptional regulator YddM |
| RA | 1,552,271 | T→C | 10.7% | intergenic (+280/+127) | fdnI → / ← yddM | formate dehydrogenase N subunit gamma/putative DNA‑binding transcriptional regulator YddM |
| RA | 1,567,466 | G→C | 7.5% | intergenic (‑247/+38) | yddY ← / ← yddW | protein YddY/putative lipoprotein YddW |
| RA | 1,567,467 | G→T | 6.0% | intergenic (‑248/+37) | yddY ← / ← yddW | protein YddY/putative lipoprotein YddW |
| RA | 1,567,469 | A→T | 5.7% | intergenic (‑250/+35) | yddY ← / ← yddW | protein YddY/putative lipoprotein YddW |
| RA | 1,567,471 | A→C | 6.4% | intergenic (‑252/+33) | yddY ← / ← yddW | protein YddY/putative lipoprotein YddW |
| RA | 1,567,472 | G→C | 7.4% | intergenic (‑253/+32) | yddY ← / ← yddW | protein YddY/putative lipoprotein YddW |
| RA | 1,570,610 | G→A | 8.5% | intergenic (‑121/+35) | gadC ← / ← gadB | L‑glutamate:4‑aminobutyrate antiporter/glutamate decarboxylase B |
| RA | 1,570,611 | G→A | 8.5% | intergenic (‑122/+34) | gadC ← / ← gadB | L‑glutamate:4‑aminobutyrate antiporter/glutamate decarboxylase B |
| RA | 1,570,612 | T→C | 8.4% | intergenic (‑123/+33) | gadC ← / ← gadB | L‑glutamate:4‑aminobutyrate antiporter/glutamate decarboxylase B |
| RA | 1,570,613 | T→C | 8.4% | intergenic (‑124/+32) | gadC ← / ← gadB | L‑glutamate:4‑aminobutyrate antiporter/glutamate decarboxylase B |
| RA | 1,584,863 | T→A | 7.2% | K542* (AAA→TAA) | ydeP ← | putative oxidoreductase YdeP |
| RA | 1,584,864 | T→A | 6.1% | L541F (TTA→TTT) | ydeP ← | putative oxidoreductase YdeP |
| RA | 1,590,599 | A→G | 5.2% | intergenic (‑63/+255) | yneL ← / ← hipA | putative HTH‑type transcriptional regulator YneL/serine/threonine kinase HipA |
| RA | 1,590,601 | G→C | 5.2% | intergenic (‑65/+253) | yneL ← / ← hipA | putative HTH‑type transcriptional regulator YneL/serine/threonine kinase HipA |
| RA | 1,590,602 | C→G | 5.2% | intergenic (‑66/+252) | yneL ← / ← hipA | putative HTH‑type transcriptional regulator YneL/serine/threonine kinase HipA |
| RA | 1,590,603 | G→C | 5.5% | intergenic (‑67/+251) | yneL ← / ← hipA | putative HTH‑type transcriptional regulator YneL/serine/threonine kinase HipA |
| RA | 1,590,605 | C→T | 5.5% | intergenic (‑69/+249) | yneL ← / ← hipA | putative HTH‑type transcriptional regulator YneL/serine/threonine kinase HipA |
| RA | 1,609,555 | Δ1 bp | 5.1% | coding (1126/1452 nt) | uxaB ← | tagaturonate reductase |
| RA | 1,609,561:1 | +C | 5.1% | coding (1120/1452 nt) | uxaB ← | tagaturonate reductase |
| RA | 1,613,276 | G→T | 7.9% | intergenic (‑25/+39) | glsB ← / ← sad | glutaminase 2/NAD(+)‑dependent succinate semialdehyde dehydrogenase |
| RA | 1,613,277 | A→T | 8.1% | intergenic (‑26/+38) | glsB ← / ← sad | glutaminase 2/NAD(+)‑dependent succinate semialdehyde dehydrogenase |
| RA | 1,613,278 | A→T | 8.1% | intergenic (‑27/+37) | glsB ← / ← sad | glutaminase 2/NAD(+)‑dependent succinate semialdehyde dehydrogenase |
| RA | 1,613,279 | A→C | 8.0% | intergenic (‑28/+36) | glsB ← / ← sad | glutaminase 2/NAD(+)‑dependent succinate semialdehyde dehydrogenase |
| RA | 1,620,224 | C→G | 5.3% | intergenic (+17/+14) | marB → / ← eamA | multiple antibiotic resistance protein/cysteine/O‑acetylserine exporter EamA |
| RA | 1,620,227 | C→G | 5.5% | intergenic (+20/+11) | marB → / ← eamA | multiple antibiotic resistance protein/cysteine/O‑acetylserine exporter EamA |
| RA | 1,625,067 | A→C | 5.3% | T99P (ACC→CCC) | ydeJ → | conserved protein YdeJ |
| RA | 1,642,370 | C→G | 6.7% | intergenic (+159/+119) | ynfS → / ← ydfT | Qin prophage; protein YnfS/Qin prophage; putative antitermination protein Q |
| RA | 1,642,373 | C→G | 6.7% | intergenic (+162/+116) | ynfS → / ← ydfT | Qin prophage; protein YnfS/Qin prophage; putative antitermination protein Q |
| RA | 1,643,735 | T→G | 5.6% | L190F (TTA→TTC) ‡ | ydfU ← | Qin prophage; protein YdfU |
| RA | 1,643,737 | A→T | 5.7% | L190I (TTA→ATA) ‡ | ydfU ← | Qin prophage; protein YdfU |
| RA | 1,643,739 | C→A | 5.7% | G189V (GGA→GTA) | ydfU ← | Qin prophage; protein YdfU |
| RA | 1,644,527 | G→T | 11.5% | intergenic (‑223/+124) | ydfU ← / ← rem | Qin prophage; protein YdfU/Qin prophage; protein Rem |
| RA | 1,644,529 | G→T | 11.5% | intergenic (‑225/+122) | ydfU ← / ← rem | Qin prophage; protein YdfU/Qin prophage; protein Rem |
| RA | 1,644,533 | A→C | 11.6% | intergenic (‑229/+118) | ydfU ← / ← rem | Qin prophage; protein YdfU/Qin prophage; protein Rem |
| RA | 1,644,534 | G→T | 11.7% | intergenic (‑230/+117) | ydfU ← / ← rem | Qin prophage; protein YdfU/Qin prophage; protein Rem |
| RA | 1,644,538 | A→C | 11.6% | intergenic (‑234/+113) | ydfU ← / ← rem | Qin prophage; protein YdfU/Qin prophage; protein Rem |
| RA | 1,644,540 | A→C | 11.3% | intergenic (‑236/+111) | ydfU ← / ← rem | Qin prophage; protein YdfU/Qin prophage; protein Rem |
| RA | 1,648,343 | Δ1 bp | 5.7% | intergenic (+2/‑165) | dicA → / → ydfA | DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA |
| RA | 1,648,348 | C→T | 5.7% | intergenic (+7/‑160) | dicA → / → ydfA | DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA |
| RA | 1,648,349 | A→G | 5.8% | intergenic (+8/‑159) | dicA → / → ydfA | DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA |
| RA | 1,648,353:1 | +T | 5.7% | intergenic (+12/‑155) | dicA → / → ydfA | DNA‑binding transcriptional dual regulator DicA/Qin prophage; DUF1391 domain‑containing protein YdfA |
| RA | 1,650,147 | G→A | 8.0% | pseudogene (70/921 nt) | ydfE → | Qin prophage; protein YdfE |
| RA | 1,650,148 | T→C | 8.0% | pseudogene (71/921 nt) | ydfE → | Qin prophage; protein YdfE |
| RA | 1,658,953 | T→C | 6.7% | I295I (ATT→ATC) | ynfE → | putative selenate reductase YnfE |
| RA | 1,658,959 | A→G | 6.3% | E297E (GAA→GAG) | ynfE → | putative selenate reductase YnfE |
| RA | 1,658,961 | A→T | 6.1% | N298I (AAT→ATT) | ynfE → | putative selenate reductase YnfE |
| RA | 1,658,963 | C→T | 6.6% | L299F (CTC→TTC) | ynfE → | putative selenate reductase YnfE |
| RA | 1,660,194 | A→C | 6.3% | K709T (AAG→ACG) | ynfE → | putative selenate reductase YnfE |
| RA | 1,660,198 | T→A | 6.5% | A710A (GCT→GCA) | ynfE → | putative selenate reductase YnfE |
| RA | 1,660,200 | C→G | 6.5% | A711G (GCC→GGC) | ynfE → | putative selenate reductase YnfE |
| RA | 1,660,202 | T→A | 6.5% | C712S (TGC→AGC) | ynfE → | putative selenate reductase YnfE |
| RA | 1,660,206 | G→T | 6.2% | R713L (CGT→CTT) | ynfE → | putative selenate reductase YnfE |
| RA | 1,661,935 | G→T | 7.1% | L460L (CTG→CTT) | ynfF → | putative selenate reductase YnfF |
| RA | 1,661,940 | T→G | 7.1% | V462G (GTC→GGC) ‡ | ynfF → | putative selenate reductase YnfF |
| RA | 1,661,941 | C→G | 8.0% | V462V (GTC→GTG) ‡ | ynfF → | putative selenate reductase YnfF |
| RA | 1,661,942 | C→G | 7.1% | P463A (CCC→GCC) ‡ | ynfF → | putative selenate reductase YnfF |
| RA | 1,661,943 | C→A | 7.0% | P463H (CCC→CAC) ‡ | ynfF → | putative selenate reductase YnfF |
| RA | 1,661,948 | A→C | 6.7% | K465Q (AAG→CAG) | ynfF → | putative selenate reductase YnfF |
| RA | 1,666,466 | T→G | 6.3% | Y384* (TAT→TAG) | clcB → | putative chloride:H(+) antiporter ClcB |
| RA | 1,666,468 | A→T | 6.5% | Q385L (CAG→CTG) | clcB → | putative chloride:H(+) antiporter ClcB |
| RA | 1,666,470 | C→A | 6.6% | L386I (CTA→ATA) | clcB → | putative chloride:H(+) antiporter ClcB |
| RA | 1,672,481 | A→T | 9.0% | A174A (GCA→GCT) | ydgD → | putative serine protease YdgD |
| RA | 1,672,484 | A→T | 9.6% | L175F (TTA→TTT) | ydgD → | putative serine protease YdgD |
| RA | 1,672,487 | A→T | 9.6% | K176N (AAA→AAT) | ydgD → | putative serine protease YdgD |
| RA | 1,684,016 | A→G | 6.5% | S379G (AGC→GGC) | rstB → | sensory histidine kinase RstB |
| RA | 1,684,019 | C→T | 6.2% | R380W (CGG→TGG) | rstB → | sensory histidine kinase RstB |
| RA | 1,689,817 | C→A | 7.1% | intergenic (+66/‑35) | manA → / → ydgA | mannose‑6‑phosphate isomerase/conserved protein YdgA |
| RA | 1,689,819 | A→T | 6.0% | intergenic (+68/‑33) | manA → / → ydgA | mannose‑6‑phosphate isomerase/conserved protein YdgA |
| RA | 1,689,821 | T→G | 6.0% | intergenic (+70/‑31) | manA → / → ydgA | mannose‑6‑phosphate isomerase/conserved protein YdgA |
| RA | 1,703,251 | A→T | 8.8% | intergenic (+17/+17) | add → / ← ydgJ | adenosine deaminase/putative oxidoreductase YdgJ |
| RA | 1,703,252 | A→T | 7.8% | intergenic (+18/+16) | add → / ← ydgJ | adenosine deaminase/putative oxidoreductase YdgJ |
| RA | 1,709,896 | T→C | 5.4% | L252P (CTG→CCG) ‡ | rsxD → | SoxR [2Fe‑2S] reducing system protein RsxD |
| RA | 1,709,897 | G→A | 5.3% | L252L (CTG→CTA) ‡ | rsxD → | SoxR [2Fe‑2S] reducing system protein RsxD |
| RA | 1,726,994 | C→G | 6.8% | S112R (AGC→AGG) | nemA → | N‑ethylmaleimide reductase |
| RA | 1,726,995 | C→T | 6.8% | L113L (CTG→TTG) | nemA → | N‑ethylmaleimide reductase |
| RA | 1,727,000 | A→G | 7.2% | Q114Q (CAA→CAG) | nemA → | N‑ethylmaleimide reductase |
| RA | 1,727,001 | C→G | 7.1% | P115A (CCT→GCT) | nemA → | N‑ethylmaleimide reductase |
| RA | 1,736,097 | T→A | 5.1% | intergenic (+138/+24) | sodB → / ← ydhP | superoxide dismutase (Fe)/putative transporter YdhP |
| RA | 1,764,687 | T→C | 5.6% | intergenic (‑301/+26) | sufA ← / ← rydB | iron‑sulfur cluster insertion protein SufA/small regulatory RNA RydB |
| RA | 1,764,693 | C→T | 5.6% | intergenic (‑307/+20) | sufA ← / ← rydB | iron‑sulfur cluster insertion protein SufA/small regulatory RNA RydB |
| RA | 1,764,694 | G→C | 5.4% | intergenic (‑308/+19) | sufA ← / ← rydB | iron‑sulfur cluster insertion protein SufA/small regulatory RNA RydB |
| RA | 1,764,695 | A→G | 5.7% | intergenic (‑309/+18) | sufA ← / ← rydB | iron‑sulfur cluster insertion protein SufA/small regulatory RNA RydB |
| RA | 1,764,701 | G→A | 5.7% | intergenic (‑315/+12) | sufA ← / ← rydB | iron‑sulfur cluster insertion protein SufA/small regulatory RNA RydB |
| RA | 1,770,203 | T→A | 5.8% | intergenic (+17/‑169) | ydiK → / → rprA | putative transporter YdiK/small regulatory RNA RprA |
| RA | 1,770,204 | C→G | 6.1% | intergenic (+18/‑168) | ydiK → / → rprA | putative transporter YdiK/small regulatory RNA RprA |
| RA | 1,770,205 | T→A | 5.9% | intergenic (+19/‑167) | ydiK → / → rprA | putative transporter YdiK/small regulatory RNA RprA |
| RA | 1,792,241 | A→T | 5.0% | intergenic (‑221/+26) | ydiV ← / ← nlpC | anti‑FlhDC factor/NlpC/P60 family lipoprotein NlpC |
| RA | 1,792,242 | T→A | 5.0% | intergenic (‑222/+25) | ydiV ← / ← nlpC | anti‑FlhDC factor/NlpC/P60 family lipoprotein NlpC |
| RA | 1,795,227 | A→T | 7.2% | intergenic (‑75/+26) | btuC ← / ← ihfA | vitamin B12 ABC transporter membrane subunit/integration host factor subunit alpha |
| RA | 1,795,228 | G→C | 8.6% | intergenic (‑76/+25) | btuC ← / ← ihfA | vitamin B12 ABC transporter membrane subunit/integration host factor subunit alpha |
| RA | 1,795,229 | A→T | 7.4% | intergenic (‑77/+24) | btuC ← / ← ihfA | vitamin B12 ABC transporter membrane subunit/integration host factor subunit alpha |
| RA | 1,799,370 | Δ1 bp | 7.3% | intergenic (‑100/+23) | pheM ← / ← rplT | pheST‑ihfA operon leader peptide/50S ribosomal subunit protein L20 |
| RA | 1,799,374:1 | +T | 7.0% | intergenic (‑104/+19) | pheM ← / ← rplT | pheST‑ihfA operon leader peptide/50S ribosomal subunit protein L20 |
| RA | 1,814,742 | C→G | 5.4% | H292Q (CAC→CAG) | katE → | catalase II |
| RA | 1,816,192 | G→A | 6.3% | intergenic (+64/+194) | katE → / ← chbG | catalase II/chitin disaccharide deacetylase |
| RA | 1,816,193 | C→A | 6.2% | intergenic (+65/+193) | katE → / ← chbG | catalase II/chitin disaccharide deacetylase |
| RA | 1,816,199 | G→T | 7.2% | intergenic (+71/+187) | katE → / ← chbG | catalase II/chitin disaccharide deacetylase |
| RA | 1,816,200 | A→C | 5.9% | intergenic (+72/+186) | katE → / ← chbG | catalase II/chitin disaccharide deacetylase |
| RA | 1,816,206 | T→G | 6.3% | intergenic (+78/+180) | katE → / ← chbG | catalase II/chitin disaccharide deacetylase |
| RA | 1,816,207 | T→C | 6.2% | intergenic (+79/+179) | katE → / ← chbG | catalase II/chitin disaccharide deacetylase |
| RA | 1,825,938 | A→C | 5.1% | intergenic (‑313/+17) | spy ← / ← astE | ATP‑independent periplasmic chaperone/succinylglutamate desuccinylase |
| RA | 1,827,442 | A→C | 5.8% | L273* (TTA→TGA) | astB ← | N‑succinylarginine dihydrolase |
| RA | 1,827,445 | T→A | 6.0% | Q272L (CAG→CTG) | astB ← | N‑succinylarginine dihydrolase |
| RA | 1,827,448 | G→T | 6.0% | S271* (TCA→TAA) | astB ← | N‑succinylarginine dihydrolase |
| RA | 1,840,795 | G→A | 6.4% | L203L (CTC→CTT) | ynjF ← | putative phosphatidyl transferase, inner membrane protein |
| RA | 1,840,798 | C→T | 6.9% | S202S (TCG→TCA) ‡ | ynjF ← | putative phosphatidyl transferase, inner membrane protein |
| RA | 1,840,799 | G→C | 7.6% | S202W (TCG→TGG) ‡ | ynjF ← | putative phosphatidyl transferase, inner membrane protein |
| RA | 1,840,800 | A→G | 6.9% | S202P (TCG→CCG) ‡ | ynjF ← | putative phosphatidyl transferase, inner membrane protein |
| RA | 1,840,803 | T→C | 6.8% | K201E (AAG→GAG) | ynjF ← | putative phosphatidyl transferase, inner membrane protein |
| RA | 1,851,204 | A→C | 7.2% | T115T (ACA→ACC) | ansA → | L‑asparaginase 1 |
| RA | 1,851,205 | G→C | 7.3% | G116R (GGG→CGG) ‡ | ansA → | L‑asparaginase 1 |
| RA | 1,851,206 | G→T | 7.2% | G116V (GGG→GTG) ‡ | ansA → | L‑asparaginase 1 |
| RA | 1,854,021 | A→G | 6.1% | intergenic (‑42/+75) | ydjE ← / ← ydjF | putative transporter YdjE/putative DNA‑binding transcriptional regulator YdjF |
| RA | 1,854,023 | T→G | 6.0% | intergenic (‑44/+73) | ydjE ← / ← ydjF | putative transporter YdjE/putative DNA‑binding transcriptional regulator YdjF |
| RA | 1,854,024 | C→A | 6.3% | intergenic (‑45/+72) | ydjE ← / ← ydjF | putative transporter YdjE/putative DNA‑binding transcriptional regulator YdjF |
| RA | 1,854,026 | C→T | 5.8% | intergenic (‑47/+70) | ydjE ← / ← ydjF | putative transporter YdjE/putative DNA‑binding transcriptional regulator YdjF |
| RA | 1,863,800 | T→C | 9.6% | intergenic (+34/‑50) | gapA → / → yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/putative aldose 1‑epimerase YeaD |
| RA | 1,863,801 | T→G | 9.6% | intergenic (+35/‑49) | gapA → / → yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/putative aldose 1‑epimerase YeaD |
| RA | 1,863,802 | C→A | 10.0% | intergenic (+36/‑48) | gapA → / → yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/putative aldose 1‑epimerase YeaD |
| RA | 1,863,803 | G→A | 9.5% | intergenic (+37/‑47) | gapA → / → yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/putative aldose 1‑epimerase YeaD |
| RA | 1,865,682 | G→C | 6.6% | intergenic (‑46/+44) | yeaE ← / ← mipA | methylglyoxal reductase YeaE/scaffolding protein that interacts with murein polymerase and murein hydrolase |
| RA | 1,868,859 | Δ1 bp | 5.8% | intergenic (+17/‑96) | yeaG → / → yeaH | protein kinase YeaG/DUF444 domain‑containing protein YeaH |
| RA | 1,868,865:1 | +G | 5.5% | intergenic (+23/‑90) | yeaG → / → yeaH | protein kinase YeaG/DUF444 domain‑containing protein YeaH |
| RA | 1,870,253 | T→C | 8.3% | intergenic (+15/‑132) | yeaH → / → cdgI | DUF444 domain‑containing protein YeaH/putative c‑di‑GMP binding protein CdgI |
| RA | 1,870,254 | C→G | 8.3% | intergenic (+16/‑131) | yeaH → / → cdgI | DUF444 domain‑containing protein YeaH/putative c‑di‑GMP binding protein CdgI |
| RA | 1,870,257 | T→A | 8.1% | intergenic (+19/‑128) | yeaH → / → cdgI | DUF444 domain‑containing protein YeaH/putative c‑di‑GMP binding protein CdgI |
| RA | 1,870,260 | C→G | 8.1% | intergenic (+22/‑125) | yeaH → / → cdgI | DUF444 domain‑containing protein YeaH/putative c‑di‑GMP binding protein CdgI |
| RA | 1,870,261 | G→A | 8.0% | intergenic (+23/‑124) | yeaH → / → cdgI | DUF444 domain‑containing protein YeaH/putative c‑di‑GMP binding protein CdgI |
| RA | 1,881,358 | T→A | 5.6% | D151V (GAC→GTC) | dmlR ← | DNA‑binding transcriptional regulator DmlR |
| RA | 1,883,027 | C→G | 11.7% | intergenic (+30/‑161) | dmlA → / → yeaV | D‑malate/3‑isopropylmalate dehydrogenase (decarboxylating)/putative transporter YeaV |
| RA | 1,887,147 | G→A | 5.0% | A282V (GCG→GTG) | rnd ← | RNase D |
| RA | 1,888,030 | A→T | 7.0% | intergenic (‑39/+31) | rnd ← / ← fadD | RNase D/fatty acyl‑CoA synthetase |
| RA | 1,888,032 | T→A | 7.2% | intergenic (‑41/+29) | rnd ← / ← fadD | RNase D/fatty acyl‑CoA synthetase |
| RA | 1,888,034 | A→T | 7.1% | intergenic (‑43/+27) | rnd ← / ← fadD | RNase D/fatty acyl‑CoA synthetase |
| RA | 1,889,915 | A→C | 9.7% | intergenic (‑169/+36) | fadD ← / ← yeaY | fatty acyl‑CoA synthetase/Slp family lipoprotein YeaY |
| RA | 1,889,916 | C→T | 8.8% | intergenic (‑170/+35) | fadD ← / ← yeaY | fatty acyl‑CoA synthetase/Slp family lipoprotein YeaY |
| RA | 1,889,917 | C→G | 8.8% | intergenic (‑171/+34) | fadD ← / ← yeaY | fatty acyl‑CoA synthetase/Slp family lipoprotein YeaY |
| RA | 1,889,918 | A→G | 8.9% | intergenic (‑172/+33) | fadD ← / ← yeaY | fatty acyl‑CoA synthetase/Slp family lipoprotein YeaY |
| RA | 1,889,919 | G→T | 9.1% | intergenic (‑173/+32) | fadD ← / ← yeaY | fatty acyl‑CoA synthetase/Slp family lipoprotein YeaY |
| RA | 1,895,391 | A→T | 7.0% | K196I (AAA→ATA) ‡ | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,895,392 | A→T | 7.0% | K196N (AAA→AAT) ‡ | pabB → | aminodeoxychorismate synthase subunit 1 |
| RA | 1,906,229 | T→G | 7.2% | I181S (ATC→AGC) ‡ | mntP → | Mn(2(+)) exporter |
| RA | 1,906,230 | C→G | 7.3% | I181M (ATC→ATG) ‡ | mntP → | Mn(2(+)) exporter |
| RA | 1,906,231 | C→A | 7.5% | L182I (CTC→ATC) | mntP → | Mn(2(+)) exporter |
| RA | 1,931,372 | G→A | 6.3% | G164G (GGG→GGA) | purT → | phosphoribosylglycinamide formyltransferase 2 |
| RA | 1,932,094 | C→G | 6.4% | intergenic (+35/+21) | purT → / ← eda | phosphoribosylglycinamide formyltransferase 2/KHG/KDPG aldolase |
| RA | 1,932,095 | T→A | 6.4% | intergenic (+36/+20) | purT → / ← eda | phosphoribosylglycinamide formyltransferase 2/KHG/KDPG aldolase |
| RA | 1,932,096 | C→G | 6.4% | intergenic (+37/+19) | purT → / ← eda | phosphoribosylglycinamide formyltransferase 2/KHG/KDPG aldolase |
| RA | 1,933,239 | C→T | 9.4% | D456N (GAC→AAC) | edd ← | phosphogluconate dehydratase |
| RA | 1,950,292 | C→G | 5.6% | A77A (GCG→GCC) | aspS ← | aspartate‑‑tRNA ligase |
| RA | 1,950,295:1 | +C | 5.5% | coding (228/1773 nt) | aspS ← | aspartate‑‑tRNA ligase |
| RA | 1,950,301 | Δ1 bp | 5.6% | coding (222/1773 nt) | aspS ← | aspartate‑‑tRNA ligase |
| RA | 1,950,306 | C→G | 5.6% | G73R (GGC→CGC) | aspS ← | aspartate‑‑tRNA ligase |
| RA | 1,954,256 | T→A | 5.5% | I272N (ATT→AAT) | cmoB → | tRNA U34 carboxymethyltransferase |
| RA | 1,966,360 | A→G | 5.4% | intergenic (‑169/+33) | flhB ← / ← cheZ | flagellar biosynthesis protein FlhB/chemotaxis protein CheZ |
| MC JC | 1,978,503 | Δ776 bp | 100% | insB‑5–insA‑5 | insB‑5, insA‑5 | |
| JC JC | 1,979,486 | IS5 (+) +4 bp | 100% | intergenic (‑271/‑264) | insA‑5 ← / → uspC | IS1 protein InsA/universal stress protein C |
| RA | 1,980,103:1 | +C | 6.8% | coding (351/429 nt) | uspC → | universal stress protein C |
| RA | 1,980,110 | T→G | 6.3% | S120A (TCC→GCC) ‡ | uspC → | universal stress protein C |
| RA | 1,980,111 | C→G | 6.4% | S120C (TCC→TGC) ‡ | uspC → | universal stress protein C |
| RA | 1,980,112 | C→A | 5.7% | S120S (TCC→TCA) ‡ | uspC → | universal stress protein C |
| RA | 1,980,118 | Δ1 bp | 6.3% | coding (366/429 nt) | uspC → | universal stress protein C |
| RA | 1,982,500 | T→C | 13.2% | intergenic (‑113/+54) | otsB ← / ← araH | trehalose‑6‑phosphate phosphatase/arabinose ABC transporter membrane subunit |
| RA | 1,982,501 | T→C | 13.3% | intergenic (‑114/+53) | otsB ← / ← araH | trehalose‑6‑phosphate phosphatase/arabinose ABC transporter membrane subunit |
| RA | 1,982,504 | G→A | 13.6% | intergenic (‑117/+50) | otsB ← / ← araH | trehalose‑6‑phosphate phosphatase/arabinose ABC transporter membrane subunit |
| RA | 1,982,505 | G→A | 13.5% | intergenic (‑118/+49) | otsB ← / ← araH | trehalose‑6‑phosphate phosphatase/arabinose ABC transporter membrane subunit |
| RA | 1,986,356 | A→T | 5.2% | intergenic (‑228/‑569) | araF ← / → ftnB | arabinose ABC transporter periplasmic binding protein/putative ferritin‑like protein |
| RA | 1,990,922 | C→T | 10.4% | intergenic (+30/+32) | tyrP → / ← yecA | tyrosine:H(+) symporter/UPF0149 family protein YecA |
| RA | 1,990,926 | A→C | 10.0% | intergenic (+34/+28) | tyrP → / ← yecA | tyrosine:H(+) symporter/UPF0149 family protein YecA |
| RA | 1,990,927 | A→G | 10.2% | intergenic (+35/+27) | tyrP → / ← yecA | tyrosine:H(+) symporter/UPF0149 family protein YecA |
| RA | 1,990,932 | C→T | 8.9% | intergenic (+40/+22) | tyrP → / ← yecA | tyrosine:H(+) symporter/UPF0149 family protein YecA |
| RA | 1,990,933 | G→T | 8.9% | intergenic (+41/+21) | tyrP → / ← yecA | tyrosine:H(+) symporter/UPF0149 family protein YecA |
| RA | 1,990,937 | A→G | 9.4% | intergenic (+45/+17) | tyrP → / ← yecA | tyrosine:H(+) symporter/UPF0149 family protein YecA |
| RA | 2,009,731 | A→G | 8.5% | intergenic (+19/‑90) | yedF → / → yedK | putative sulfurtransferase YedF/putative SOS response‑associated peptidase YedK |
| RA | 2,009,732 | C→G | 8.6% | intergenic (+20/‑89) | yedF → / → yedK | putative sulfurtransferase YedF/putative SOS response‑associated peptidase YedK |
| RA | 2,009,733 | C→T | 8.4% | intergenic (+21/‑88) | yedF → / → yedK | putative sulfurtransferase YedF/putative SOS response‑associated peptidase YedK |
| RA | 2,024,612 | C→A | 7.7% | intergenic (+21/+23) | rcsA → / ← dsrB | DNA‑binding transcriptional activator RcsA/protein DsrB |
| RA | 2,025,578 | G→A | 8.1% | S23N (AGT→AAT) ‡ | yedP → | putative mannosyl‑3‑phosphoglycerate phosphatase |
| RA | 2,025,579 | T→C | 8.1% | S23S (AGT→AGC) ‡ | yedP → | putative mannosyl‑3‑phosphoglycerate phosphatase |
| RA | 2,028,158 | G→C | 9.4% | intergenic (‑141/+30) | dgcQ ← / ← yodC | putative diguanylate cyclase DgcQ/protein YodC |
| RA | 2,028,159 | T→A | 9.3% | intergenic (‑142/+29) | dgcQ ← / ← yodC | putative diguanylate cyclase DgcQ/protein YodC |
| RA | 2,028,160 | G→C | 9.4% | intergenic (‑143/+28) | dgcQ ← / ← yodC | putative diguanylate cyclase DgcQ/protein YodC |
| RA | 2,032,336 | G→C | 5.6% | intergenic (‑19/+48) | dcm ← / ← yedJ | DNA‑cytosine methyltransferase/putative HD superfamily phosphohydrolase YedJ |
| RA | 2,041,159 | G→A | 6.8% | intergenic (+41/‑216) | msrQ → / → zinT | periplasmic protein‑L‑methionine sulfoxide reductase heme binding subunit/metal‑binding protein ZinT |
| RA | 2,041,160 | T→G | 7.5% | intergenic (+42/‑215) | msrQ → / → zinT | periplasmic protein‑L‑methionine sulfoxide reductase heme binding subunit/metal‑binding protein ZinT |
| RA | 2,041,166 | G→T | 6.6% | intergenic (+48/‑209) | msrQ → / → zinT | periplasmic protein‑L‑methionine sulfoxide reductase heme binding subunit/metal‑binding protein ZinT |
| RA | 2,041,167 | A→C | 6.8% | intergenic (+49/‑208) | msrQ → / → zinT | periplasmic protein‑L‑methionine sulfoxide reductase heme binding subunit/metal‑binding protein ZinT |
| RA | 2,041,173 | C→A | 7.5% | intergenic (+55/‑202) | msrQ → / → zinT | periplasmic protein‑L‑methionine sulfoxide reductase heme binding subunit/metal‑binding protein ZinT |
| RA | 2,041,174 | T→C | 7.3% | intergenic (+56/‑201) | msrQ → / → zinT | periplasmic protein‑L‑methionine sulfoxide reductase heme binding subunit/metal‑binding protein ZinT |
| RA | 2,044,729 | T→A | 5.0% | intergenic (+105/‑209) | asnT → / → yeeJ | tRNA‑Asn/inverse autotransporter adhesin |
| RA | 2,044,733 | T→C | 5.8% | intergenic (+109/‑205) | asnT → / → yeeJ | tRNA‑Asn/inverse autotransporter adhesin |
| RA | 2,062,354 | T→A | 8.4% | intergenic (+19/+37) | asnV → / ← ldtA | tRNA‑Asn/L,D‑transpeptidase ErfK |
| RA | 2,062,355 | T→G | 8.7% | intergenic (+20/+36) | asnV → / ← ldtA | tRNA‑Asn/L,D‑transpeptidase ErfK |
| RA | 2,062,356 | C→A | 9.7% | intergenic (+21/+35) | asnV → / ← ldtA | tRNA‑Asn/L,D‑transpeptidase ErfK |
| RA | 2,062,357 | T→A | 8.6% | intergenic (+22/+34) | asnV → / ← ldtA | tRNA‑Asn/L,D‑transpeptidase ErfK |
| RA | 2,077,788 | C→G | 6.1% | R74G (CGT→GGT) | cbtA → | CP4‑44 prophage; cytoskeleton‑binding toxin CbtA |
| RA | 2,078,297 | Δ1 bp | 5.8% | intergenic (+163/‑278) | yeeW → / → yoeF | CP4‑44 prophage; putative uncharacterized protein YeeW/CP4‑44 prophage; putative uncharacterized protein YoeF |
| RA | 2,078,301 | A→T | 5.9% | intergenic (+167/‑274) | yeeW → / → yoeF | CP4‑44 prophage; putative uncharacterized protein YeeW/CP4‑44 prophage; putative uncharacterized protein YoeF |
| RA | 2,078,304 | A→T | 5.7% | intergenic (+170/‑271) | yeeW → / → yoeF | CP4‑44 prophage; putative uncharacterized protein YeeW/CP4‑44 prophage; putative uncharacterized protein YoeF |
| RA | 2,078,306:1 | +G | 5.9% | intergenic (+172/‑269) | yeeW → / → yoeF | CP4‑44 prophage; putative uncharacterized protein YeeW/CP4‑44 prophage; putative uncharacterized protein YoeF |
| RA | 2,090,122 | A→G | 7.1% | intergenic (+76/‑70) | hisL → / → hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| RA | 2,090,124 | C→G | 7.0% | intergenic (+78/‑68) | hisL → / → hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| RA | 2,090,126 | C→T | 7.3% | intergenic (+80/‑66) | hisL → / → hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| RA | 2,103,105 | C→A | 5.5% | pseudogene (285/446 nt) | wbbL ← | interrupted rhamnosyltransferase WbbL |
| RA | 2,103,107 | T→G | 5.0% | pseudogene (283/446 nt) | wbbL ← | interrupted rhamnosyltransferase WbbL |
| RA | 2,115,847 | G→T | 6.2% | A17E (GCG→GAG) | wcaM ← | putative colanic acid biosynthesis protein WcaM |
| RA | 2,115,849 | C→G | 6.1% | S16S (TCG→TCC) ‡ | wcaM ← | putative colanic acid biosynthesis protein WcaM |
| RA | 2,115,851 | A→C | 6.1% | S16A (TCG→GCG) ‡ | wcaM ← | putative colanic acid biosynthesis protein WcaM |
| RA | 2,128,795 | A→C | 5.0% | F32V (TTT→GTT) | wcaF ← | putative acyl transferase |
| RA | 2,128,799 | T→A | 5.6% | T30T (ACA→ACT) | wcaF ← | putative acyl transferase |
| RA | 2,132,787 | A→C | 100% | I204S (ATC→AGC) | wcaA ← | putative colanic acid biosynthesis glycosyl transferase |
| RA | 2,139,709 | G→A | 6.2% | intergenic (+224/+50) | yegH → / ← asmA | inner membrane protein YegH/putative assembly protein AsmA |
| RA | 2,139,710 | C→A | 6.2% | intergenic (+225/+49) | yegH → / ← asmA | inner membrane protein YegH/putative assembly protein AsmA |
| RA | 2,139,716 | T→G | 6.2% | intergenic (+231/+43) | yegH → / ← asmA | inner membrane protein YegH/putative assembly protein AsmA |
| RA | 2,139,718 | T→A | 6.2% | intergenic (+233/+41) | yegH → / ← asmA | inner membrane protein YegH/putative assembly protein AsmA |
| RA | 2,139,720 | C→A | 6.0% | intergenic (+235/+39) | yegH → / ← asmA | inner membrane protein YegH/putative assembly protein AsmA |
| RA | 2,139,726 | T→G | 6.1% | intergenic (+241/+33) | yegH → / ← asmA | inner membrane protein YegH/putative assembly protein AsmA |
| RA | 2,139,727 | T→C | 6.0% | intergenic (+242/+32) | yegH → / ← asmA | inner membrane protein YegH/putative assembly protein AsmA |
| RA | 2,142,505 | G→C | 6.1% | R148R (CGC→CGG) | udk ← | uridine/cytidine kinase |
| RA | 2,165,143 | C→T | 7.3% | intergenic (+145/‑46) | baeR → / → yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| RA | 2,165,146 | T→A | 6.3% | intergenic (+148/‑43) | baeR → / → yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| RA | 2,165,147 | T→A | 6.3% | intergenic (+149/‑42) | baeR → / → yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| RA | 2,165,150 | A→G | 6.1% | intergenic (+152/‑39) | baeR → / → yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| RA | 2,173,361 | Δ2 bp | 100% | pseudogene (917‑918/1358 nt) | gatC ← | galactitol‑specific PTS enzyme IIC component |
| RA | 2,201,035 | T→A | 5.7% | F253I (TTT→ATT) | yehI → | DUF4132 domain‑containing protein YehI |
| RA | 2,229,322 | C→G | 10.1% | intergenic (+257/+116) | yohP → / ← dusC | putative membrane protein YohP/tRNA‑dihydrouridine(16) synthase |
| RA | 2,229,323 | C→G | 10.1% | intergenic (+258/+115) | yohP → / ← dusC | putative membrane protein YohP/tRNA‑dihydrouridine(16) synthase |
| RA | 2,267,734 | T→C | 5.9% | intergenic (+23/‑95) | yeiQ → / → yeiR | putative dehydrogenase, NAD‑dependent/zinc‑binding GTPase YeiR |
| RA | 2,267,739 | C→G | 5.8% | intergenic (+28/‑90) | yeiQ → / → yeiR | putative dehydrogenase, NAD‑dependent/zinc‑binding GTPase YeiR |
| RA | 2,267,741 | C→G | 5.8% | intergenic (+30/‑88) | yeiQ → / → yeiR | putative dehydrogenase, NAD‑dependent/zinc‑binding GTPase YeiR |
| RA | 2,267,743 | C→G | 5.8% | intergenic (+32/‑86) | yeiQ → / → yeiR | putative dehydrogenase, NAD‑dependent/zinc‑binding GTPase YeiR |
| RA | 2,267,748 | G→A | 5.5% | intergenic (+37/‑81) | yeiQ → / → yeiR | putative dehydrogenase, NAD‑dependent/zinc‑binding GTPase YeiR |
| RA | 2,270,602 | T→C | 7.2% | intergenic (+57/‑124) | mepS → / → pdeN | peptidoglycan DD‑endopeptidase/peptidoglycan LD‑carboxypeptidase/putative c‑di‑GMP phosphodiesterase PdeN |
| RA | 2,270,605 | G→A | 6.9% | intergenic (+60/‑121) | mepS → / → pdeN | peptidoglycan DD‑endopeptidase/peptidoglycan LD‑carboxypeptidase/putative c‑di‑GMP phosphodiesterase PdeN |
| RA | 2,286,139 | A→T | 6.6% | intergenic (+3/‑72) | yejM → / → proL | putative cardiolipin transport protein/tRNA‑Pro |
| RA | 2,286,142 | T→A | 7.1% | intergenic (+6/‑69) | yejM → / → proL | putative cardiolipin transport protein/tRNA‑Pro |
| RA | 2,286,145 | A→T | 7.1% | intergenic (+9/‑66) | yejM → / → proL | putative cardiolipin transport protein/tRNA‑Pro |
| RA | 2,286,311 | C→G | 7.6% | intergenic (+24/+79) | proL → / ← yejO | tRNA‑Pro/adhesin‑like autotransporter YejO |
| RA | 2,286,313 | T→A | 7.4% | intergenic (+26/+77) | proL → / ← yejO | tRNA‑Pro/adhesin‑like autotransporter YejO |
| RA | 2,286,315 | C→G | 7.5% | intergenic (+28/+75) | proL → / ← yejO | tRNA‑Pro/adhesin‑like autotransporter YejO |
| RA | 2,288,596 | G→A | 5.6% | pseudogene (319/2525 nt) | yejO ← | adhesin‑like autotransporter YejO |
| RA | 2,304,649 | C→T | 15.5% | intergenic (+256/+459) | eco → / ← mqo | serine protease inhibitor ecotin/malate:quinone oxidoreductase |
| RA | 2,310,326 | A→T | 6.3% | F27Y (TTC→TAC) | ada ← | DNA‑binding transcriptional dual regulator/DNA repair protein Ada |
| RA | 2,311,616 | C→T | 9.0% | intergenic (‑82/+30) | ftp ← / ← ompC | FAD:protein FMN transferase/outer membrane porin C |
| RA | 2,311,619 | A→G | 8.8% | intergenic (‑85/+27) | ftp ← / ← ompC | FAD:protein FMN transferase/outer membrane porin C |
| RA | 2,312,170 | G→C | 6.2% | L194V (CTG→GTG) | ompC ← | outer membrane porin C |
| RA | 2,319,581 | A→G | 5.9% | V99A (GTG→GCG) ‡ | rcsC ← | sensory histidine kinase RcsC |
| RA | 2,319,582 | C→G | 5.2% | V99L (GTG→CTG) ‡ | rcsC ← | sensory histidine kinase RcsC |
| RA | 2,319,585 | C→G | 5.7% | D98H (GAT→CAT) | rcsC ← | sensory histidine kinase RcsC |
| RA | 2,319,586 | C→T | 5.7% | A97A (GCG→GCA) | rcsC ← | sensory histidine kinase RcsC |
| RA | 2,329,708 | A→G | 8.3% | G30G (GGT→GGC) ‡ | yfaQ ← | tandem DUF2300 domain‑containing protein YfaQ |
| RA | 2,329,709 | C→G | 8.1% | G30A (GGT→GCT) ‡ | yfaQ ← | tandem DUF2300 domain‑containing protein YfaQ |
| RA | 2,329,710 | C→T | 8.4% | G30S (GGT→AGT) ‡ | yfaQ ← | tandem DUF2300 domain‑containing protein YfaQ |
| RA | 2,356,734 | G→C | 6.6% | intergenic (+23/‑170) | glpC → / → rpnE | anaerobic glycerol‑3‑phosphate dehydrogenase subunit C/inactive recombination‑promoting nuclease‑like protein RpnE |
| RA | 2,356,737 | T→C | 6.7% | intergenic (+26/‑167) | glpC → / → rpnE | anaerobic glycerol‑3‑phosphate dehydrogenase subunit C/inactive recombination‑promoting nuclease‑like protein RpnE |
| RA | 2,356,738 | G→A | 6.7% | intergenic (+27/‑166) | glpC → / → rpnE | anaerobic glycerol‑3‑phosphate dehydrogenase subunit C/inactive recombination‑promoting nuclease‑like protein RpnE |
| RA | 2,356,741 | G→C | 6.7% | intergenic (+30/‑163) | glpC → / → rpnE | anaerobic glycerol‑3‑phosphate dehydrogenase subunit C/inactive recombination‑promoting nuclease‑like protein RpnE |
| RA | 2,363,448 | A→G | 6.2% | D62D (GAT→GAC) ‡ | yfaY ← | IPR008135 CinA family protein YfaY |
| RA | 2,363,449 | T→C | 6.0% | D62G (GAT→GGT) ‡ | yfaY ← | IPR008135 CinA family protein YfaY |
| RA | 2,363,452 | G→A | 6.0% | A61V (GCC→GTC) ‡ | yfaY ← | IPR008135 CinA family protein YfaY |
| RA | 2,363,453 | C→T | 6.0% | A61T (GCC→ACC) ‡ | yfaY ← | IPR008135 CinA family protein YfaY |
| RA | 2,364,995 | T→G | 7.7% | intergenic (+16/+23) | nudI → / ← ais | pyrimidine deoxynucleotide diphosphatase NudI/putative lipopolysaccharide core heptose(II)‑phosphate phosphatase |
| RA | 2,364,998 | C→A | 7.6% | intergenic (+19/+20) | nudI → / ← ais | pyrimidine deoxynucleotide diphosphatase NudI/putative lipopolysaccharide core heptose(II)‑phosphate phosphatase |
| RA | 2,366,010:1 | +T | 9.5% | coding (101/1158 nt) | arnB → | UDP‑4‑amino‑4‑deoxy‑L‑arabinose aminotransferase |
| RA | 2,366,015 | Δ1 bp | 9.8% | coding (106/1158 nt) | arnB → | UDP‑4‑amino‑4‑deoxy‑L‑arabinose aminotransferase |
| RA | 2,376,949 | G→C | 5.1% | A215G (GCC→GGC) | menH ← | 2‑succinyl‑6‑hydroxy‑2, 4‑cyclohexadiene‑1‑carboxylate synthase |
| RA | 2,390,012 | Δ1 bp | 8.4% | intergenic (+48/+36) | yfbP → / ← nuoN | uncharacterized protein YfbP/NADH:quinone oxidoreductase subunit N |
| RA | 2,390,016:1 | +C | 8.6% | intergenic (+52/+32) | yfbP → / ← nuoN | uncharacterized protein YfbP/NADH:quinone oxidoreductase subunit N |
| RA | 2,399,876 | G→A | 8.0% | T97I (ACC→ATC) | nuoG ← | NADH:quinone oxidoreductase subunit G |
| RA | 2,399,878 | C→G | 8.0% | M96I (ATG→ATC) ‡ | nuoG ← | NADH:quinone oxidoreductase subunit G |
| RA | 2,399,880 | T→C | 8.2% | M96V (ATG→GTG) ‡ | nuoG ← | NADH:quinone oxidoreductase subunit G |
| RA | 2,405,928 | C→T | 5.9% | R238R (AGG→AGA) | lrhA ← | DNA‑binding transcriptional dual regulator LrhA |
| RA | 2,405,933 | C→G | 7.6% | A237P (GCA→CCA) | lrhA ← | DNA‑binding transcriptional dual regulator LrhA |
| RA | 2,405,937 | C→G | 7.6% | V235V (GTG→GTC) | lrhA ← | DNA‑binding transcriptional dual regulator LrhA |
| RA | 2,405,941 | C→G | 8.1% | G234A (GGC→GCC) | lrhA ← | DNA‑binding transcriptional dual regulator LrhA |
| RA | 2,405,946 | A→G | 7.9% | G232G (GGT→GGC) | lrhA ← | DNA‑binding transcriptional dual regulator LrhA |
| RA | 2,406,377 | A→C | 5.6% | C89G (TGC→GGC) | lrhA ← | DNA‑binding transcriptional dual regulator LrhA |
| RA | 2,406,378 | G→C | 5.9% | A88A (GCC→GCG) ‡ | lrhA ← | DNA‑binding transcriptional dual regulator LrhA |
| RA | 2,406,379 | G→T | 5.2% | A88D (GCC→GAC) ‡ | lrhA ← | DNA‑binding transcriptional dual regulator LrhA |
| RA | 2,411,408 | A→T | 5.0% | intergenic (‑56/+31) | yfbS ← / ← hxpA | putative transporter YfbS/hexitol phosphatase A |
| RA | 2,411,410 | G→T | 5.1% | intergenic (‑58/+29) | yfbS ← / ← hxpA | putative transporter YfbS/hexitol phosphatase A |
| RA | 2,411,411 | A→C | 5.2% | intergenic (‑59/+28) | yfbS ← / ← hxpA | putative transporter YfbS/hexitol phosphatase A |
| RA | 2,411,413 | A→T | 5.2% | intergenic (‑61/+26) | yfbS ← / ← hxpA | putative transporter YfbS/hexitol phosphatase A |
| RA | 2,412,639 | T→A | 6.0% | intergenic (‑45/+38) | yfbU ← / ← yfbV | UPF0304 family protein YfbU/UPF0208 membrane protein YfbV |
| RA | 2,412,640 | G→T | 6.2% | intergenic (‑46/+37) | yfbU ← / ← yfbV | UPF0304 family protein YfbU/UPF0208 membrane protein YfbV |
| RA | 2,412,642 | G→C | 6.7% | intergenic (‑48/+35) | yfbU ← / ← yfbV | UPF0304 family protein YfbU/UPF0208 membrane protein YfbV |
| RA | 2,412,644 | A→C | 6.1% | intergenic (‑50/+33) | yfbU ← / ← yfbV | UPF0304 family protein YfbU/UPF0208 membrane protein YfbV |
| RA | 2,412,645 | T→A | 6.1% | intergenic (‑51/+32) | yfbU ← / ← yfbV | UPF0304 family protein YfbU/UPF0208 membrane protein YfbV |
| RA | 2,428,038 | A→T | 5.9% | intergenic (‑247/+19) | argT ← / ← ubiX | lysine/arginine/ornithine ABC transporter periplasmic binding protein/flavin prenyltransferase |
| RA | 2,428,039 | A→T | 5.9% | intergenic (‑248/+18) | argT ← / ← ubiX | lysine/arginine/ornithine ABC transporter periplasmic binding protein/flavin prenyltransferase |
| RA | 2,428,040 | A→T | 6.1% | intergenic (‑249/+17) | argT ← / ← ubiX | lysine/arginine/ornithine ABC transporter periplasmic binding protein/flavin prenyltransferase |
| RA | 2,438,862 | A→G | 5.8% | T305A (ACG→GCG) | flk → | putative flagella assembly protein |
| RA | 2,438,869 | A→C | 6.5% | Q307P (CAA→CCA) | flk → | putative flagella assembly protein |
| RA | 2,438,871 | A→T | 6.5% | N308Y (AAT→TAT) | flk → | putative flagella assembly protein |
| RA | 2,438,874 | A→T | 6.2% | M309L (ATG→TTG) ‡ | flk → | putative flagella assembly protein |
| RA | 2,438,876 | G→T | 6.1% | M309I (ATG→ATT) ‡ | flk → | putative flagella assembly protein |
| RA | 2,438,883 | C→T | 5.7% | R312C (CGT→TGT) | flk → | putative flagella assembly protein |
| RA | 2,440,295 | A→T | 6.7% | intergenic (‑175/+90) | yfcJ ← / ← fabB | putative transporter YfcJ/beta‑ketoacyl‑[acyl carrier protein] synthase I |
| RA | 2,440,296 | T→G | 6.4% | intergenic (‑176/+89) | yfcJ ← / ← fabB | putative transporter YfcJ/beta‑ketoacyl‑[acyl carrier protein] synthase I |
| RA | 2,440,297 | C→A | 6.6% | intergenic (‑177/+88) | yfcJ ← / ← fabB | putative transporter YfcJ/beta‑ketoacyl‑[acyl carrier protein] synthase I |
| RA | 2,440,298 | A→T | 6.6% | intergenic (‑178/+87) | yfcJ ← / ← fabB | putative transporter YfcJ/beta‑ketoacyl‑[acyl carrier protein] synthase I |
| RA | 2,449,201 | A→T | 10.0% | intergenic (+44/+27) | smrB → / ← yfcO | putative endonuclease SmrB/DUF2544 domain‑containing protein YfcO |
| RA | 2,477,014 | C→A | 9.3% | A206S (GCA→TCA) | dsdC ← | DNA‑binding transcriptional dual regulator DsdC |
| RA | 2,477,016 | T→A | 12.0% | Q205L (CAG→CTG) | dsdC ← | DNA‑binding transcriptional dual regulator DsdC |
| RA | 2,477,018 | T→A | 9.3% | R204S (AGA→AGT) ‡ | dsdC ← | DNA‑binding transcriptional dual regulator DsdC |
| RA | 2,477,020 | T→A | 9.5% | R204* (AGA→TGA) ‡ | dsdC ← | DNA‑binding transcriptional dual regulator DsdC |
| RA | 2,477,022 | T→G | 9.4% | D203A (GAC→GCC) | dsdC ← | DNA‑binding transcriptional dual regulator DsdC |
| RA | 2,486,798 | G→T | 8.2% | A809S (GCA→TCA) | evgS → | sensory histidine kinase EvgS |
| RA | 2,491,266 | C→G | 5.1% | E229Q (GAA→CAA) | oxc ← | oxalyl‑CoA decarboxylase |
| RA | 2,497,023 | A→T | 6.1% | intergenic (+31/+34) | ypdK → / ← alaC | putative membrane protein YpdK/glutamate‑‑pyruvate aminotransferase AlaC |
| RA | 2,497,024 | T→G | 6.3% | intergenic (+32/+33) | ypdK → / ← alaC | putative membrane protein YpdK/glutamate‑‑pyruvate aminotransferase AlaC |
| RA | 2,497,025 | C→A | 6.2% | intergenic (+33/+32) | ypdK → / ← alaC | putative membrane protein YpdK/glutamate‑‑pyruvate aminotransferase AlaC |
| RA | 2,497,026 | A→T | 6.0% | intergenic (+34/+31) | ypdK → / ← alaC | putative membrane protein YpdK/glutamate‑‑pyruvate aminotransferase AlaC |
| RA | 2,504,192 | T→A | 6.0% | A98A (GCA→GCT) | fryA ← | putative PTS multiphosphoryl transfer protein FryA |
| RA | 2,504,197 | G→A | 6.0% | Q97* (CAG→TAG) | fryA ← | putative PTS multiphosphoryl transfer protein FryA |
| RA | 2,504,200 | T→C | 5.8% | T96A (ACG→GCG) | fryA ← | putative PTS multiphosphoryl transfer protein FryA |
| RA | 2,504,205 | T→A | 5.4% | Q94L (CAG→CTG) | fryA ← | putative PTS multiphosphoryl transfer protein FryA |
| RA | 2,518,197 | C→G | 6.5% | noncoding (35/76 nt) | alaW ← | tRNA‑Ala |
| RA | 2,519,222 | T→G | 8.4% | intergenic (+17/+35) | yfeD → / ← gltX | putative DNA‑binding transcriptional regulator YfeD/glutamate‑‑tRNA ligase |
| RA | 2,519,225 | T→A | 8.3% | intergenic (+20/+32) | yfeD → / ← gltX | putative DNA‑binding transcriptional regulator YfeD/glutamate‑‑tRNA ligase |
| RA | 2,519,228 | C→A | 8.1% | intergenic (+23/+29) | yfeD → / ← gltX | putative DNA‑binding transcriptional regulator YfeD/glutamate‑‑tRNA ligase |
| RA | 2,523,798 | T→G | 8.3% | D63A (GAC→GCC) | xapB ← | xanthosine:H(+) symporter XapB |
| RA | 2,525,907 | G→A | 10.8% | intergenic (+16/+23) | yfeN → / ← yfeR | conserved outer membrane protein YfeN/putative LysR‑type DNA‑binding transcriptional regulator YfeR |
| RA | 2,525,908 | C→G | 12.2% | intergenic (+17/+22) | yfeN → / ← yfeR | conserved outer membrane protein YfeN/putative LysR‑type DNA‑binding transcriptional regulator YfeR |
| RA | 2,533,415 | T→A | 5.4% | intergenic (+35/‑349) | cysK → / → ptsH | O‑acetylserine sulfhydrylase A/phosphocarrier protein HPr |
| RA | 2,533,416 | T→A | 6.1% | intergenic (+36/‑348) | cysK → / → ptsH | O‑acetylserine sulfhydrylase A/phosphocarrier protein HPr |
| RA | 2,533,417 | T→A | 5.4% | intergenic (+37/‑347) | cysK → / → ptsH | O‑acetylserine sulfhydrylase A/phosphocarrier protein HPr |
| RA | 2,536,370 | C→G | 6.2% | intergenic (+27/+16) | crr → / ← pdxK | Enzyme IIA(Glc)/pyridoxal kinase I |
| RA | 2,536,373 | C→G | 6.1% | intergenic (+30/+13) | crr → / ← pdxK | Enzyme IIA(Glc)/pyridoxal kinase I |
| RA | 2,538,736 | C→T | 6.1% | G283D (GGC→GAC) ‡ | cysM ← | cysteine synthase B |
| RA | 2,538,737 | C→G | 5.9% | G283R (GGC→CGC) ‡ | cysM ← | cysteine synthase B |
| RA | 2,538,738 | A→G | 6.1% | R282R (CGT→CGC) | cysM ← | cysteine synthase B |
| RA | 2,557,869 | C→G | 7.6% | V271L (GTG→CTG) | eutB ← | ethanolamine ammonia‑lyase subunit alpha |
| RA | 2,560,985 | C→A | 18.8% | intergenic (+87/‑383) | yffL → / → yffM | CPZ‑55 prophage; uncharacterized protein YffL/CPZ‑55 prophage; uncharacterized protein YffM |
| RA | 2,560,996 | G→T | 22.8% | intergenic (+98/‑372) | yffL → / → yffM | CPZ‑55 prophage; uncharacterized protein YffL/CPZ‑55 prophage; uncharacterized protein YffM |
| RA | 2,566,266 | C→A | 8.8% | G207C (GGC→TGC) | eutA ← | reactivating factor for ethanolamine ammonia‑lyase EutBC |
| RA | 2,566,267 | T→G | 8.5% | A206A (GCA→GCC) | eutA ← | reactivating factor for ethanolamine ammonia‑lyase EutBC |
| RA | 2,572,268 | T→A | 6.3% | A61A (GCA→GCT) | eutM ← | putative structural protein, ethanolamine utilization microcompartment |
| RA | 2,587,006 | A→C | 5.7% | T426P (ACG→CCG) ‡ | narQ → | sensory histidine kinase NarQ |
| RA | 2,587,007 | C→T | 5.6% | T426M (ACG→ATG) ‡ | narQ → | sensory histidine kinase NarQ |
| RA | 2,587,010 | T→A | 5.5% | L427Q (CTG→CAG) | narQ → | sensory histidine kinase NarQ |
| RA | 2,587,013 | A→G | 5.8% | Q428R (CAG→CGG) ‡ | narQ → | sensory histidine kinase NarQ |
| RA | 2,587,014 | G→T | 5.8% | Q428H (CAG→CAT) ‡ | narQ → | sensory histidine kinase NarQ |
| RA | 2,596,873 | Δ1 bp | 12.0% | intergenic (‑136/+32) | ypfJ ← / ← purC | uncharacterized protein YpfJ/phosphoribosylaminoimidazole‑succinocarboxamide synthase |
| RA | 2,596,878:1 | +G | 11.4% | intergenic (‑141/+27) | ypfJ ← / ← purC | uncharacterized protein YpfJ/phosphoribosylaminoimidazole‑succinocarboxamide synthase |
| RA | 2,599,236 | C→A | 9.2% | E175D (GAG→GAT) | dapA ← | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| RA | 2,599,239 | T→A | 9.2% | K174N (AAA→AAT) ‡ | dapA ← | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| RA | 2,599,240 | T→A | 9.0% | K174I (AAA→ATA) ‡ | dapA ← | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| RA | 2,599,241 | T→A | 9.0% | K174* (AAA→TAA) ‡ | dapA ← | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| RA | 2,599,244 | T→G | 9.3% | I173L (ATC→CTC) | dapA ← | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| RA | 2,611,186 | C→A | 6.4% | Q161K (CAG→AAG) | hyfI → | hydrogenase 4 catalytic subunit HyfI |
| RA | 2,612,832 | T→C | 6.8% | V311V (GTT→GTC) | hyfR → | DNA‑binding transcriptional activator HyfR |
| RA | 2,620,216 | C→T | 9.6% | intergenic (‑56/+30) | uraA ← / ← upp | hypothetical protein/uracil phosphoribosyltransferase |
| RA | 2,620,218 | T→A | 10.0% | intergenic (‑58/+28) | uraA ← / ← upp | hypothetical protein/uracil phosphoribosyltransferase |
| RA | 2,620,220 | A→G | 9.5% | intergenic (‑60/+26) | uraA ← / ← upp | hypothetical protein/uracil phosphoribosyltransferase |
| RA | 2,624,195 | C→G | 5.9% | D384E (GAC→GAG) | ppk → | polyphosphate kinase |
| RA | 2,632,584 | A→T | 10.8% | intergenic (‑49/+20) | guaA ← / ← guaB | GMP synthetase/inosine 5'‑monophosphate dehydrogenase |
| RA | 2,632,586 | G→C | 10.1% | intergenic (‑51/+18) | guaA ← / ← guaB | GMP synthetase/inosine 5'‑monophosphate dehydrogenase |
| RA | 2,632,588 | A→T | 10.2% | intergenic (‑53/+16) | guaA ← / ← guaB | GMP synthetase/inosine 5'‑monophosphate dehydrogenase |
| RA | 2,636,286 | G→T | 5.7% | H357Q (CAC→CAA) | der ← | 50S ribosomal subunit stability factor |
| RA | 2,636,291 | A→C | 5.7% | L356V (TTG→GTG) | der ← | 50S ribosomal subunit stability factor |
| RA | 2,648,452 | C→A | 5.7% | G1279V (GGT→GTT) | yfhM ← | alpha2‑macroglobulin |
| RA | 2,648,455 | C→G | 5.7% | R1278P (CGG→CCG) | yfhM ← | alpha2‑macroglobulin |
| RA | 2,648,458 | T→G | 6.5% | N1277T (AAC→ACC) | yfhM ← | alpha2‑macroglobulin |
| RA | 2,648,463:1 | +A | 5.7% | coding (3825/4962 nt) | yfhM ← | alpha2‑macroglobulin |
| RA | 2,658,422 | C→G | 7.0% | A172P (GCG→CCG) | hscA ← | iron‑sulfur cluster biosynthesis chaperone HscA |
| RA | 2,661,472 | G→C | 6.4% | A20A (GCC→GCG) | iscS ← | cysteine desulfurase |
| RA | 2,661,476:1 | +C | 5.6% | coding (56/1215 nt) | iscS ← | cysteine desulfurase |
| RA | 2,661,482 | G→C | 7.9% | P17R (CCG→CGG) | iscS ← | cysteine desulfurase |
| RA | 2,661,486 | C→G | 7.7% | D16H (GAC→CAC) | iscS ← | cysteine desulfurase |
| RA | 2,661,487 | C→G | 7.7% | V15V (GTG→GTC) | iscS ← | cysteine desulfurase |
| RA | 2,661,491 | G→C | 7.8% | P14R (CCG→CGG) | iscS ← | cysteine desulfurase |
| RA | 2,666,972 | C→T | 6.3% | W292* (TGG→TAG) | hcaT ← | putative 3‑phenylpropionate transporter |
| RA | 2,666,978 | A→G | 5.7% | L290S (TTG→TCG) ‡ | hcaT ← | putative 3‑phenylpropionate transporter |
| RA | 2,666,979 | A→T | 5.5% | L290M (TTG→ATG) ‡ | hcaT ← | putative 3‑phenylpropionate transporter |
| RA | 2,666,980 | C→T | 5.7% | A289A (GCG→GCA) | hcaT ← | putative 3‑phenylpropionate transporter |
| RA | 2,666,986 | A→G | 5.5% | T287T (ACT→ACC) | hcaT ← | putative 3‑phenylpropionate transporter |
| RA | 2,679,430 | Δ1 bp | 8.3% | intergenic (‑63/+34) | yphF ← / ← yphG | putative ABC transporter periplasmic binding protein YphF/DUF5107 domain‑containing protein YphG |
| RA | 2,679,434:1 | +C | 9.1% | intergenic (‑67/+30) | yphF ← / ← yphG | putative ABC transporter periplasmic binding protein YphF/DUF5107 domain‑containing protein YphG |
| RA | 2,684,206 | G→T | 5.4% | intergenic (+150/+48) | yphH → / ← glyA | putative DNA‑binding transcriptional regulator, NAGC‑like/serine hydroxymethyltransferase |
| RA | 2,691,169 | A→T | 11.5% | noncoding (172/184 nt) | glmY ← | small regulatory RNA GlmY |
| RA | 2,691,171 | T→A | 11.3% | noncoding (170/184 nt) | glmY ← | small regulatory RNA GlmY |
| RA | 2,691,173 | A→T | 11.6% | noncoding (168/184 nt) | glmY ← | small regulatory RNA GlmY |
| RA | 2,700,862 | G→A | 6.2% | P46L (CCG→CTG) ‡ | acpS ← | holo‑[acyl‑carrier‑protein] synthase |
| RA | 2,700,863 | G→C | 5.3% | P46A (CCG→GCG) ‡ | acpS ← | holo‑[acyl‑carrier‑protein] synthase |
| RA | 2,700,865 | T→A | 5.2% | Q45L (CAG→CTG) | acpS ← | holo‑[acyl‑carrier‑protein] synthase |
| RA | 2,700,867 | G→C | 6.1% | H44Q (CAC→CAG) ‡ | acpS ← | holo‑[acyl‑carrier‑protein] synthase |
| RA | 2,700,868 | T→C | 5.2% | H44R (CAC→CGC) ‡ | acpS ← | holo‑[acyl‑carrier‑protein] synthase |
| RA | 2,701,536 | A→T | 5.9% | L65Q (CTG→CAG) | pdxJ ← | pyridoxine 5'‑phosphate synthase |
| RA | 2,701,542 | T→A | 6.0% | Q63L (CAG→CTG) | pdxJ ← | pyridoxine 5'‑phosphate synthase |
| RA | 2,701,548 | A→T | 5.7% | L61Q (CTG→CAG) | pdxJ ← | pyridoxine 5'‑phosphate synthase |
| RA | 2,712,130 | T→A | 5.8% | Q212L (CAG→CTG) | yfiC ← | tRNA m(6)A37 methyltransferase |
| RA | 2,712,133 | G→C | 5.6% | P211R (CCG→CGG) | yfiC ← | tRNA m(6)A37 methyltransferase |
| RA | 2,724,095 | C→A | 6.0% | intergenic (+13/‑33) | pssA → / → yfiM | phosphatidylserine synthase/protein YfiM |
| RA | 2,724,097 | T→A | 5.9% | intergenic (+15/‑31) | pssA → / → yfiM | phosphatidylserine synthase/protein YfiM |
| RA | 2,724,099 | T→G | 5.6% | intergenic (+17/‑29) | pssA → / → yfiM | phosphatidylserine synthase/protein YfiM |
| RA | 2,726,043 | G→T | 6.8% | intergenic (‑297/+26) | kgtP ← / ← rrfG | alpha‑ketoglutarate:H(+) symporter/5S ribosomal RNA |
| RA | 2,726,044 | T→G | 7.4% | intergenic (‑298/+25) | kgtP ← / ← rrfG | alpha‑ketoglutarate:H(+) symporter/5S ribosomal RNA |
| RA | 2,726,045 | C→A | 5.5% | intergenic (‑299/+24) | kgtP ← / ← rrfG | alpha‑ketoglutarate:H(+) symporter/5S ribosomal RNA |
| RA | 2,726,046 | A→C | 7.0% | intergenic (‑300/+23) | kgtP ← / ← rrfG | alpha‑ketoglutarate:H(+) symporter/5S ribosomal RNA |
| RA | 2,737,703 | A→G | 6.5% | intergenic (+57/‑42) | pheL → / → pheA | phe operon leader peptide/fused chorismate mutase/prephenate dehydratase |
| RA | 2,737,705 | A→T | 6.5% | intergenic (+59/‑40) | pheL → / → pheA | phe operon leader peptide/fused chorismate mutase/prephenate dehydratase |
| RA | 2,737,707 | C→T | 6.4% | intergenic (+61/‑38) | pheL → / → pheA | phe operon leader peptide/fused chorismate mutase/prephenate dehydratase |
| RA | 2,737,711 | G→A | 7.0% | intergenic (+65/‑34) | pheL → / → pheA | phe operon leader peptide/fused chorismate mutase/prephenate dehydratase |
| RA | 2,738,925 | G→T | 5.4% | intergenic (+20/+23) | pheA → / ← tyrA | fused chorismate mutase/prephenate dehydratase/fused chorismate mutase/prephenate dehydrogenase |
| RA | 2,738,926 | T→C | 5.4% | intergenic (+21/+22) | pheA → / ← tyrA | fused chorismate mutase/prephenate dehydratase/fused chorismate mutase/prephenate dehydrogenase |
| RA | 2,738,927 | G→A | 5.4% | intergenic (+22/+21) | pheA → / ← tyrA | fused chorismate mutase/prephenate dehydratase/fused chorismate mutase/prephenate dehydrogenase |
| RA | 2,738,928 | A→C | 5.3% | intergenic (+23/+20) | pheA → / ← tyrA | fused chorismate mutase/prephenate dehydratase/fused chorismate mutase/prephenate dehydrogenase |
| RA | 2,742,794 | G→T | 6.7% | E138* (GAA→TAA) ‡ | dgcN → | diguanylate cyclase DgcN |
| RA | 2,742,795 | A→T | 6.7% | E138V (GAA→GTA) ‡ | dgcN → | diguanylate cyclase DgcN |
| RA | 2,742,796 | A→C | 6.4% | E138D (GAA→GAC) ‡ | dgcN → | diguanylate cyclase DgcN |
| RA | 2,753,986 | A→T | 7.5% | intergenic (+40/+22) | bamE → / ← yfjF | outer membrane protein assembly factor BamE/putative component of the Rsx system |
| RA | 2,770,309 | G→A | 8.8% | V203I (GTT→ATT) ‡ | yfjR → | CP4‑57 prophage; putative DNA‑binding transcriptional regulator |
| RA | 2,770,310 | T→A | 8.8% | V203D (GTT→GAT) ‡ | yfjR → | CP4‑57 prophage; putative DNA‑binding transcriptional regulator |
| RA | 2,770,319 | C→G | 8.5% | P206R (CCG→CGG) | yfjR → | CP4‑57 prophage; putative DNA‑binding transcriptional regulator |
| RA | 2,770,328 | T→A | 6.0% | I209N (ATT→AAT) ‡ | yfjR → | CP4‑57 prophage; putative DNA‑binding transcriptional regulator |
| RA | 2,770,329 | T→C | 6.2% | I209I (ATT→ATC) ‡ | yfjR → | CP4‑57 prophage; putative DNA‑binding transcriptional regulator |
| RA | 2,796,375 | T→A | 7.9% | I138F (ATT→TTT) | kbp ← | K(+) binding protein |
| RA | 2,801,056 | A→T | 8.1% | N31I (AAT→ATT) | nrdI → | dimanganese‑tyrosyl radical cofactor maintenance flavodoxin NrdI |
| RA | 2,807,091 | T→C | 6.1% | intergenic (+17/‑41) | proW → / → proX | glycine betaine ABC transporter membrane subunit ProW/glycine betaine ABC transporter periplasmic binding protein ProX |
| RA | 2,807,093 | A→T | 5.9% | intergenic (+19/‑39) | proW → / → proX | glycine betaine ABC transporter membrane subunit ProW/glycine betaine ABC transporter periplasmic binding protein ProX |
| RA | 2,807,095 | G→A | 5.8% | intergenic (+21/‑37) | proW → / → proX | glycine betaine ABC transporter membrane subunit ProW/glycine betaine ABC transporter periplasmic binding protein ProX |
| RA | 2,810,872 | C→T | 10.0% | H35Y (CAC→TAC) ‡ | mprA → | DNA‑binding transcriptional repressor MprA |
| RA | 2,810,873 | A→G | 10.1% | H35R (CAC→CGC) ‡ | mprA → | DNA‑binding transcriptional repressor MprA |
| RA | 2,815,908 | C→A | 5.8% | A178S (GCG→TCG) | gshA ← | glutamate‑‑cysteine ligase |
| RA | 2,838,222 | A→T | 5.1% | intergenic (‑117/+32) | hydN ← / ← ascG | putative electron transport protein HydN/DNA‑binding transcriptional repressor AscG |
| RA | 2,838,231 | A→T | 6.0% | intergenic (‑126/+23) | hydN ← / ← ascG | putative electron transport protein HydN/DNA‑binding transcriptional repressor AscG |
| RA | 2,839,321 | C→G | 9.7% | intergenic (‑57/‑203) | ascG ← / → ascF | DNA‑binding transcriptional repressor AscG/beta‑glucoside specific PTS enzyme IIBC component |
| RA | 2,839,323 | T→A | 9.8% | intergenic (‑59/‑201) | ascG ← / → ascF | DNA‑binding transcriptional repressor AscG/beta‑glucoside specific PTS enzyme IIBC component |
| RA | 2,839,324 | T→A | 9.8% | intergenic (‑60/‑200) | ascG ← / → ascF | DNA‑binding transcriptional repressor AscG/beta‑glucoside specific PTS enzyme IIBC component |
| RA | 2,839,326 | C→G | 9.9% | intergenic (‑62/‑198) | ascG ← / → ascF | DNA‑binding transcriptional repressor AscG/beta‑glucoside specific PTS enzyme IIBC component |
| RA | 2,855,349 | G→A | 5.1% | E338K (GAA→AAA) ‡ | fhlA → | DNA‑binding transcriptional activator FhlA |
| RA | 2,855,350 | A→C | 5.2% | E338A (GAA→GCA) ‡ | fhlA → | DNA‑binding transcriptional activator FhlA |
| RA | 2,855,355 | G→T | 5.5% | V340L (GTG→TTG) ‡ | fhlA → | DNA‑binding transcriptional activator FhlA |
| RA | 2,855,356 | T→C | 5.6% | V340A (GTG→GCG) ‡ | fhlA → | DNA‑binding transcriptional activator FhlA |
| RA | 2,861,322 | A→T | 6.2% | intergenic (‑88/‑108) | ygbI ← / → ygbJ | putative DeoR‑type DNA‑binding transcriptional regulator YgbI/putative L‑threonate dehydrogenase |
| RA | 2,861,328 | C→T | 6.2% | intergenic (‑94/‑102) | ygbI ← / → ygbJ | putative DeoR‑type DNA‑binding transcriptional regulator YgbI/putative L‑threonate dehydrogenase |
| RA | 2,861,329 | A→T | 6.2% | intergenic (‑95/‑101) | ygbI ← / → ygbJ | putative DeoR‑type DNA‑binding transcriptional regulator YgbI/putative L‑threonate dehydrogenase |
| RA | 2,861,330 | C→G | 6.2% | intergenic (‑96/‑100) | ygbI ← / → ygbJ | putative DeoR‑type DNA‑binding transcriptional regulator YgbI/putative L‑threonate dehydrogenase |
| RA | 2,861,331 | A→T | 6.9% | intergenic (‑97/‑99) | ygbI ← / → ygbJ | putative DeoR‑type DNA‑binding transcriptional regulator YgbI/putative L‑threonate dehydrogenase |
| RA | 2,861,332 | A→G | 5.8% | intergenic (‑98/‑98) | ygbI ← / → ygbJ | putative DeoR‑type DNA‑binding transcriptional regulator YgbI/putative L‑threonate dehydrogenase |
| RA | 2,861,338 | A→T | 5.7% | intergenic (‑104/‑92) | ygbI ← / → ygbJ | putative DeoR‑type DNA‑binding transcriptional regulator YgbI/putative L‑threonate dehydrogenase |
| RA | 2,890,613 | A→T | 5.4% | V429E (GTG→GAG) | cysJ ← | sulfite reductase, flavoprotein subunit |
| RA | 2,890,617 | G→T | 5.5% | R428S (CGC→AGC) | cysJ ← | sulfite reductase, flavoprotein subunit |
| RA | 2,890,619 | T→A | 5.5% | D427V (GAC→GTC) | cysJ ← | sulfite reductase, flavoprotein subunit |
| RA | 2,890,621 | A→C | 5.3% | A426A (GCT→GCG) | cysJ ← | sulfite reductase, flavoprotein subunit |
| RA | 2,890,625 | A→T | 5.1% | L425H (CTC→CAC) | cysJ ← | sulfite reductase, flavoprotein subunit |
| RA | 2,894,845 | G→A | 6.0% | intergenic (+74/+74) | ygcP → / ← ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| RA | 2,894,846 | C→A | 5.9% | intergenic (+75/+73) | ygcP → / ← ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| RA | 2,894,852 | T→G | 6.1% | intergenic (+81/+67) | ygcP → / ← ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| RA | 2,894,854 | G→C | 6.1% | intergenic (+83/+65) | ygcP → / ← ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| RA | 2,894,856 | C→A | 6.8% | intergenic (+85/+63) | ygcP → / ← ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| RA | 2,894,862 | T→G | 6.2% | intergenic (+91/+57) | ygcP → / ← ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| RA | 2,894,863 | T→C | 6.2% | intergenic (+92/+56) | ygcP → / ← ygcQ | putative anti‑terminator regulatory protein/putative flavoprotein |
| RA | 2,897,910 | G→A | 6.5% | intergenic (‑40/+54) | ygcS ← / ← ygcU | putative transporter YgcS/putative FAD‑containing dehydrogenase |
| RA | 2,897,911 | C→G | 6.6% | intergenic (‑41/+53) | ygcS ← / ← ygcU | putative transporter YgcS/putative FAD‑containing dehydrogenase |
| RA | 2,897,912 | C→G | 6.6% | intergenic (‑42/+52) | ygcS ← / ← ygcU | putative transporter YgcS/putative FAD‑containing dehydrogenase |
| RA | 2,897,913 | T→C | 6.6% | intergenic (‑43/+51) | ygcS ← / ← ygcU | putative transporter YgcS/putative FAD‑containing dehydrogenase |
| RA | 2,900,322 | C→T | 6.6% | intergenic (‑49/‑270) | ygcW ← / → yqcE | putative deoxygluconate dehydrogenase/putative transport protein YqcE |
| RA | 2,900,324 | G→T | 6.6% | intergenic (‑51/‑268) | ygcW ← / → yqcE | putative deoxygluconate dehydrogenase/putative transport protein YqcE |
| RA | 2,900,327 | A→C | 6.7% | intergenic (‑54/‑265) | ygcW ← / → yqcE | putative deoxygluconate dehydrogenase/putative transport protein YqcE |
| RA | 2,907,998 | A→T | 5.0% | intergenic (‑57/+31) | eno ← / ← pyrG | enolase/CTP synthetase |
| RA | 2,917,895 | G→A | 6.1% | intergenic (+82/+150) | barA → / ← gudD | sensory histidine kinase BarA/D‑glucarate dehydratase |
| RA | 2,917,896 | C→A | 6.1% | intergenic (+83/+149) | barA → / ← gudD | sensory histidine kinase BarA/D‑glucarate dehydratase |
| RA | 2,917,909 | T→G | 5.9% | intergenic (+96/+136) | barA → / ← gudD | sensory histidine kinase BarA/D‑glucarate dehydratase |
| RA | 2,917,910 | T→C | 5.9% | intergenic (+97/+135) | barA → / ← gudD | sensory histidine kinase BarA/D‑glucarate dehydratase |
| RA | 2,918,017 | C→T | 6.0% | intergenic (+204/+28) | barA → / ← gudD | sensory histidine kinase BarA/D‑glucarate dehydratase |
| RA | 2,918,019 | G→T | 5.8% | intergenic (+206/+26) | barA → / ← gudD | sensory histidine kinase BarA/D‑glucarate dehydratase |
| RA | 2,918,020 | A→C | 5.9% | intergenic (+207/+25) | barA → / ← gudD | sensory histidine kinase BarA/D‑glucarate dehydratase |
| RA | 2,918,022 | A→G | 5.9% | intergenic (+209/+23) | barA → / ← gudD | sensory histidine kinase BarA/D‑glucarate dehydratase |
| RA | 2,933,395 | G→T | 5.5% | C98* (TGC→TGA) | fucA ← | L‑fuculose‑phosphate aldolase |
| RA | 2,933,398 | A→T | 5.5% | H97Q (CAT→CAA) | fucA ← | L‑fuculose‑phosphate aldolase |
| RA | 2,933,401 | A→C | 5.3% | V96V (GTT→GTG) | fucA ← | L‑fuculose‑phosphate aldolase |
| RA | 2,939,331 | A→G | 8.0% | intergenic (+21/‑37) | fucU → / → fucR | L‑fucose mutarotase/DNA‑binding transcriptional activator FucR |
| RA | 2,939,333 | G→C | 8.0% | intergenic (+23/‑35) | fucU → / → fucR | L‑fucose mutarotase/DNA‑binding transcriptional activator FucR |
| RA | 2,939,335 | C→T | 8.0% | intergenic (+25/‑33) | fucU → / → fucR | L‑fucose mutarotase/DNA‑binding transcriptional activator FucR |
| RA | 2,942,592 | G→T | 6.1% | intergenic (‑25/‑104) | gcvA ← / → gcvB | DNA‑binding transcriptional dual regulator GcvA/small regulatory RNA GcvB |
| RA | 2,942,593 | A→C | 5.7% | intergenic (‑26/‑103) | gcvA ← / → gcvB | DNA‑binding transcriptional dual regulator GcvA/small regulatory RNA GcvB |
| RA | 2,961,248 | A→T | 5.8% | L394Q (CTG→CAG) | recC ← | exodeoxyribonuclease V subunit RecC |
| RA | 2,961,251 | A→T | 5.9% | L393Q (CTG→CAG) | recC ← | exodeoxyribonuclease V subunit RecC |
| RA | 2,987,103 | C→T | 6.1% | intergenic (+27/‑433) | yqeG → / → yqeH | putative transporter YqeG/putative LuxR family transcriptional regulator YqeH |
| RA | 2,987,104 | T→A | 5.8% | intergenic (+28/‑432) | yqeG → / → yqeH | putative transporter YqeG/putative LuxR family transcriptional regulator YqeH |
| RA | 2,987,105 | A→G | 6.0% | intergenic (+29/‑431) | yqeG → / → yqeH | putative transporter YqeG/putative LuxR family transcriptional regulator YqeH |
| RA | 2,993,889 | T→A | 6.9% | intergenic (+33/‑50) | ygeI → / → pbl | protein YgeI/transglycosylase domain‑containing protein Pbl |
| RA | 2,993,896 | T→A | 7.7% | intergenic (+40/‑43) | ygeI → / → pbl | protein YgeI/transglycosylase domain‑containing protein Pbl |
| RA | 2,997,649 | T→A | 6.3% | intergenic (‑49/+40) | insC‑4 ← / ← ygeP | IS2 insertion element repressor InsA/protein YgeP |
| RA | 3,007,466 | T→C | 5.6% | intergenic (+14/‑44) | ygeW → / → ygeX | putative carbamoyltransferase YgeW/2,3‑diaminopropionate ammonia‑lyase |
| RA | 3,007,473 | G→A | 5.4% | intergenic (+21/‑37) | ygeW → / → ygeX | putative carbamoyltransferase YgeW/2,3‑diaminopropionate ammonia‑lyase |
| RA | 3,042,314 | A→G | 7.0% | intergenic (+21/+175) | ygfZ → / ← yqfA | folate‑binding protein/hemolysin‑III family protein |
| RA | 3,042,315 | T→A | 6.7% | intergenic (+22/+174) | ygfZ → / ← yqfA | folate‑binding protein/hemolysin‑III family protein |
| RA | 3,042,317 | T→A | 6.8% | intergenic (+24/+172) | ygfZ → / ← yqfA | folate‑binding protein/hemolysin‑III family protein |
| RA | 3,042,319 | T→A | 6.6% | intergenic (+26/+170) | ygfZ → / ← yqfA | folate‑binding protein/hemolysin‑III family protein |
| RA | 3,042,320 | C→T | 6.6% | intergenic (+27/+169) | ygfZ → / ← yqfA | folate‑binding protein/hemolysin‑III family protein |
| RA | 3,044,330 | C→G | 6.2% | A223A (GCC→GCG) | bglA → | 6‑phospho‑beta‑glucosidase A |
| RA | 3,045,124 | T→C | 7.2% | intergenic (+23/+34) | bglA → / ← ygfF | 6‑phospho‑beta‑glucosidase A/putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain |
| RA | 3,045,126 | C→A | 7.1% | intergenic (+25/+32) | bglA → / ← ygfF | 6‑phospho‑beta‑glucosidase A/putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain |
| RA | 3,045,127 | T→G | 7.0% | intergenic (+26/+31) | bglA → / ← ygfF | 6‑phospho‑beta‑glucosidase A/putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain |
| RA | 3,045,129 | G→A | 7.2% | intergenic (+28/+29) | bglA → / ← ygfF | 6‑phospho‑beta‑glucosidase A/putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain |
| RA | 3,057,140 | A→G | 5.0% | intergenic (+149/+38) | sibC → / ← serA | small RNA SibC/phosphoglycerate dehydrogenase |
| RA | 3,067,320 | A→T | 6.5% | intergenic (‑147/+20) | ygfI ← / ← yggE | putative LysR‑type DNA‑binding transcriptional regulator YgfI/uncharacterized protein YggE |
| RA | 3,067,323 | A→T | 6.3% | intergenic (‑150/+17) | ygfI ← / ← yggE | putative LysR‑type DNA‑binding transcriptional regulator YgfI/uncharacterized protein YggE |
| RA | 3,068,922 | G→T | 5.9% | intergenic (‑114/+25) | argO ← / ← mscS | L‑arginine exporter/small conductance mechanosensitive channel MscS |
| RA | 3,068,924 | G→A | 6.6% | intergenic (‑116/+23) | argO ← / ← mscS | L‑arginine exporter/small conductance mechanosensitive channel MscS |
| RA | 3,068,927 | T→C | 6.4% | intergenic (‑119/+20) | argO ← / ← mscS | L‑arginine exporter/small conductance mechanosensitive channel MscS |
| RA | 3,068,929 | A→C | 6.4% | intergenic (‑121/+18) | argO ← / ← mscS | L‑arginine exporter/small conductance mechanosensitive channel MscS |
| RA | 3,070,010 | G→A | 8.0% | intergenic (‑203/+155) | mscS ← / ← fbaA | small conductance mechanosensitive channel MscS/fructose‑bisphosphate aldolase class II |
| RA | 3,070,011 | C→A | 8.0% | intergenic (‑204/+154) | mscS ← / ← fbaA | small conductance mechanosensitive channel MscS/fructose‑bisphosphate aldolase class II |
| RA | 3,070,017 | G→T | 7.7% | intergenic (‑210/+148) | mscS ← / ← fbaA | small conductance mechanosensitive channel MscS/fructose‑bisphosphate aldolase class II |
| RA | 3,070,018 | A→C | 7.8% | intergenic (‑211/+147) | mscS ← / ← fbaA | small conductance mechanosensitive channel MscS/fructose‑bisphosphate aldolase class II |
| RA | 3,070,024 | T→G | 7.8% | intergenic (‑217/+141) | mscS ← / ← fbaA | small conductance mechanosensitive channel MscS/fructose‑bisphosphate aldolase class II |
| RA | 3,070,025 | T→C | 7.7% | intergenic (‑218/+140) | mscS ← / ← fbaA | small conductance mechanosensitive channel MscS/fructose‑bisphosphate aldolase class II |
| RA | 3,079,856 | C→G | 5.5% | A594P (GCT→CCT) | tktA ← | transketolase 1 |
| RA | 3,079,859 | C→G | 5.3% | D593H (GAT→CAT) | tktA ← | transketolase 1 |
| RA | 3,098,515 | G→C | 5.1% | intergenic (+112/+43) | yggW → / ← yggM | putative coproporphyrinogen‑III oxidase‑like protein YggW/DUF1202 domain‑containing protein YggM |
| RA | 3,098,518 | C→T | 5.1% | intergenic (+115/+40) | yggW → / ← yggM | putative coproporphyrinogen‑III oxidase‑like protein YggW/DUF1202 domain‑containing protein YggM |
| RA | 3,098,519 | A→G | 5.0% | intergenic (+116/+39) | yggW → / ← yggM | putative coproporphyrinogen‑III oxidase‑like protein YggW/DUF1202 domain‑containing protein YggM |
| RA | 3,098,522 | G→C | 5.2% | intergenic (+119/+36) | yggW → / ← yggM | putative coproporphyrinogen‑III oxidase‑like protein YggW/DUF1202 domain‑containing protein YggM |
| RA | 3,101,655 | T→A | 5.3% | intergenic (‑32/+152) | yggN ← / ← yggL | putative EcfF/protein YggL |
| RA | 3,101,656 | T→A | 5.3% | intergenic (‑33/+151) | yggN ← / ← yggL | putative EcfF/protein YggL |
| RA | 3,105,532 | C→G | 6.4% | intergenic (+20/‑182) | mltC → / → nupG | membrane‑bound lytic murein transglycosylase C/nucleoside:H(+) symporter NupG |
| RA | 3,105,533 | G→C | 5.6% | intergenic (+21/‑181) | mltC → / → nupG | membrane‑bound lytic murein transglycosylase C/nucleoside:H(+) symporter NupG |
| RA | 3,105,536 | G→C | 5.5% | intergenic (+24/‑178) | mltC → / → nupG | membrane‑bound lytic murein transglycosylase C/nucleoside:H(+) symporter NupG |
| RA | 3,105,537 | C→G | 7.3% | intergenic (+25/‑177) | mltC → / → nupG | membrane‑bound lytic murein transglycosylase C/nucleoside:H(+) symporter NupG |
| RA | 3,114,519 | G→A | 7.2% | intergenic (‑167/+31) | pppA ← / ← yghJ | prepilin peptidase/putative lipoprotein YghJ |
| RA | 3,114,520 | C→A | 7.1% | intergenic (‑168/+30) | pppA ← / ← yghJ | prepilin peptidase/putative lipoprotein YghJ |
| RA | 3,114,526 | G→T | 7.6% | intergenic (‑174/+24) | pppA ← / ← yghJ | prepilin peptidase/putative lipoprotein YghJ |
| RA | 3,114,527 | A→C | 8.0% | intergenic (‑175/+23) | pppA ← / ← yghJ | prepilin peptidase/putative lipoprotein YghJ |
| RA | 3,114,533 | T→G | 8.9% | intergenic (‑181/+17) | pppA ← / ← yghJ | prepilin peptidase/putative lipoprotein YghJ |
| RA | 3,114,534 | T→C | 9.0% | intergenic (‑182/+16) | pppA ← / ← yghJ | prepilin peptidase/putative lipoprotein YghJ |
| RA | 3,125,308 | C→T | 5.5% | R51H (CGC→CAC) | glcF ← | glycolate dehydrogenase, putative iron‑sulfur subunit |
| RA | 3,131,323 | C→T | 6.0% | intergenic (+129/+18) | insH‑9 → / ← yghQ | IS5 transposase and trans‑activator/putative transport protein YghQ |
| RA | 3,135,356 | T→C | 6.4% | Q339R (CAG→CGG) ‡ | pitB ← | metal phosphate:H(+) symporter PitB |
| RA | 3,135,357 | G→A | 5.5% | Q339* (CAG→TAG) ‡ | pitB ← | metal phosphate:H(+) symporter PitB |
| RA | 3,143,980 | C→A | 5.9% | G62V (GGC→GTC) | hybB ← | hydrogenase 2 membrane subunit |
| RA | 3,156,590 | C→A | 11.0% | intergenic (+72/‑33) | yqhD → / → dkgA | NADPH‑dependent aldehyde reductase YqhD/methylglyoxal reductase DkgA |
| RA | 3,156,591 | T→G | 10.8% | intergenic (+73/‑32) | yqhD → / → dkgA | NADPH‑dependent aldehyde reductase YqhD/methylglyoxal reductase DkgA |
| RA | 3,171,852 | C→T | 11.5% | intergenic (+19/+27) | qseC → / ← ygiZ | sensory histidine kinase QseC/conserved inner membrane protein YgiZ |
| RA | 3,171,857 | A→T | 10.4% | intergenic (+24/+22) | qseC → / ← ygiZ | sensory histidine kinase QseC/conserved inner membrane protein YgiZ |
| RA | 3,171,858 | A→T | 10.4% | intergenic (+25/+21) | qseC → / ← ygiZ | sensory histidine kinase QseC/conserved inner membrane protein YgiZ |
| RA | 3,171,863 | A→G | 10.1% | intergenic (+30/+16) | qseC → / ← ygiZ | sensory histidine kinase QseC/conserved inner membrane protein YgiZ |
| RA | 3,172,436 | T→G | 7.7% | intergenic (‑225/‑94) | ygiZ ← / → mdaB | conserved inner membrane protein YgiZ/NADPH:quinone oxidoreductase MdaB |
| RA | 3,172,439 | A→T | 7.6% | intergenic (‑228/‑91) | ygiZ ← / → mdaB | conserved inner membrane protein YgiZ/NADPH:quinone oxidoreductase MdaB |
| RA | 3,172,442 | C→A | 8.5% | intergenic (‑231/‑88) | ygiZ ← / → mdaB | conserved inner membrane protein YgiZ/NADPH:quinone oxidoreductase MdaB |
| RA | 3,180,505 | G→T | 5.4% | E29* (GAG→TAG) ‡ | ygiC → | putative enzyme with ATPase activity |
| RA | 3,180,506 | A→C | 5.5% | E29A (GAG→GCG) ‡ | ygiC → | putative enzyme with ATPase activity |
| RA | 3,180,694 | A→G | 6.0% | T92A (ACG→GCG) | ygiC → | putative enzyme with ATPase activity |
| RA | 3,181,600 | A→G | 5.6% | intergenic (+19/+19) | ygiC → / ← ygiD | putative enzyme with ATPase activity/4,5‑DOPA dioxygenase extradiol |
| RA | 3,181,601 | C→A | 5.6% | intergenic (+20/+18) | ygiC → / ← ygiD | putative enzyme with ATPase activity/4,5‑DOPA dioxygenase extradiol |
| RA | 3,181,602 | T→G | 5.6% | intergenic (+21/+17) | ygiC → / ← ygiD | putative enzyme with ATPase activity/4,5‑DOPA dioxygenase extradiol |
| RA | 3,181,603 | C→T | 5.5% | intergenic (+22/+16) | ygiC → / ← ygiD | putative enzyme with ATPase activity/4,5‑DOPA dioxygenase extradiol |
| RA | 3,192,132 | T→A | 5.3% | intergenic (‑193/‑76) | glgS ← / → yqiJ | surface composition regulator/putative inner membrane protein |
| RA | 3,194,609 | T→A | 7.2% | intergenic (+84/+112) | yqiK → / ← sibD | protein YqiK/small RNA SibD |
| RA | 3,194,631 | G→C | 5.8% | intergenic (+106/+90) | yqiK → / ← sibD | protein YqiK/small RNA SibD |
| RA | 3,195,904 | A→C | 6.9% | C284G (TGC→GGC) | rfaE ← | fused heptose 7‑phosphate kinase/heptose 1‑phosphate adenyltransferase |
| RA | 3,195,905 | G→T | 7.0% | A283A (GCC→GCA) | rfaE ← | fused heptose 7‑phosphate kinase/heptose 1‑phosphate adenyltransferase |
| RA | 3,202,003 | G→C | 7.2% | G38A (GGC→GCC) | cca → | fused tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase and phosphatase |
| RA | 3,202,009 | A→T | 7.9% | Q40L (CAG→CTG) | cca → | fused tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase and phosphatase |
| RA | 3,202,012 | A→T | 8.0% | Q41L (CAG→CTG) | cca → | fused tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase and phosphatase |
| RA | 3,202,018 | G→C | 7.0% | G43A (GGC→GCC) | cca → | fused tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase and phosphatase |
| RA | 3,202,685 | A→G | 7.1% | E265E (GAA→GAG) | cca → | fused tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase and phosphatase |
| RA | 3,202,686 | C→T | 6.1% | L266F (CTC→TTC) | cca → | fused tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase and phosphatase |
| RA | 3,202,693 | C→G | 6.1% | P268R (CCG→CGG) | cca → | fused tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase and phosphatase |
| RA | 3,206,671 | C→A | 9.7% | A70D (GCC→GAC) | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,206,673 | T→A | 9.7% | C71S (TGT→AGT) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,206,675 | T→G | 8.9% | C71W (TGT→TGG) ‡ | ttdA → | L(+)‑tartrate dehydratase subunit alpha |
| RA | 3,215,694 | G→T | 6.5% | intergenic (+21/+33) | ileX → / ← nfeF | tRNA‑Ile/NADPH‑dependent ferric chelate reductase |
| RA | 3,215,695 | A→T | 6.1% | intergenic (+22/+32) | ileX → / ← nfeF | tRNA‑Ile/NADPH‑dependent ferric chelate reductase |
| RA | 3,215,696 | A→T | 6.5% | intergenic (+23/+31) | ileX → / ← nfeF | tRNA‑Ile/NADPH‑dependent ferric chelate reductase |
| RA | 3,215,697 | A→C | 6.5% | intergenic (+24/+30) | ileX → / ← nfeF | tRNA‑Ile/NADPH‑dependent ferric chelate reductase |
| RA | 3,216,652 | G→A | 6.1% | intergenic (‑161/‑127) | nfeF ← / → nfeR | NADPH‑dependent ferric chelate reductase/DNA‑binding transcriptional repressor NfeR |
| RA | 3,216,653 | C→A | 6.3% | intergenic (‑162/‑126) | nfeF ← / → nfeR | NADPH‑dependent ferric chelate reductase/DNA‑binding transcriptional repressor NfeR |
| RA | 3,216,659 | G→T | 10.3% | intergenic (‑168/‑120) | nfeF ← / → nfeR | NADPH‑dependent ferric chelate reductase/DNA‑binding transcriptional repressor NfeR |
| RA | 3,216,660 | A→C | 9.9% | intergenic (‑169/‑119) | nfeF ← / → nfeR | NADPH‑dependent ferric chelate reductase/DNA‑binding transcriptional repressor NfeR |
| RA | 3,216,666 | T→G | 11.2% | intergenic (‑175/‑113) | nfeF ← / → nfeR | NADPH‑dependent ferric chelate reductase/DNA‑binding transcriptional repressor NfeR |
| RA | 3,216,667 | T→C | 11.2% | intergenic (‑176/‑112) | nfeF ← / → nfeR | NADPH‑dependent ferric chelate reductase/DNA‑binding transcriptional repressor NfeR |
| RA | 3,231,473 | T→G | 5.7% | intergenic (+234/‑192) | ygjK → / → fadH | glycoside hydrolase/2,4‑dienoyl‑CoA reductase |
| RA | 3,231,474 | T→C | 5.6% | intergenic (+235/‑191) | ygjK → / → fadH | glycoside hydrolase/2,4‑dienoyl‑CoA reductase |
| RA | 3,238,463 | C→T | 6.4% | intergenic (+166/‑117) | ygjR → / → alx | putative oxidoreductase YgjR/putative membrane‑bound redox modulator Alx |
| RA | 3,238,464 | A→C | 6.3% | intergenic (+167/‑116) | ygjR → / → alx | putative oxidoreductase YgjR/putative membrane‑bound redox modulator Alx |
| RA | 3,238,465 | G→T | 6.5% | intergenic (+168/‑115) | ygjR → / → alx | putative oxidoreductase YgjR/putative membrane‑bound redox modulator Alx |
| RA | 3,238,466 | A→G | 6.5% | intergenic (+169/‑114) | ygjR → / → alx | putative oxidoreductase YgjR/putative membrane‑bound redox modulator Alx |
| RA | 3,239,609 | T→G | 6.8% | intergenic (+64/‑335) | alx → / → sstT | putative membrane‑bound redox modulator Alx/serine/threonine:Na(+) symporter |
| RA | 3,239,610 | C→G | 6.5% | intergenic (+65/‑334) | alx → / → sstT | putative membrane‑bound redox modulator Alx/serine/threonine:Na(+) symporter |
| RA | 3,239,611 | C→A | 6.5% | intergenic (+66/‑333) | alx → / → sstT | putative membrane‑bound redox modulator Alx/serine/threonine:Na(+) symporter |
| RA | 3,250,990 | A→T | 5.0% | intergenic (+36/‑34) | yqjF → / → yqjG | DoxX family protein/glutathionyl‑hydroquinone reductase YqjG |
| RA | 3,276,886 | C→A | 7.9% | intergenic (+33/‑116) | garD → / → prlF | galactarate dehydratase/antitoxin PrlF |
| RA | 3,276,887 | T→C | 9.4% | intergenic (+34/‑115) | garD → / → prlF | galactarate dehydratase/antitoxin PrlF |
| RA | 3,276,890 | G→A | 9.2% | intergenic (+37/‑112) | garD → / → prlF | galactarate dehydratase/antitoxin PrlF |
| RA | 3,276,891 | T→G | 9.2% | intergenic (+38/‑111) | garD → / → prlF | galactarate dehydratase/antitoxin PrlF |
| RA | 3,282,927 | A→G | 9.1% | I318V (ATC→GTC) ‡ | agaS → | putative galactosamine‑6‑phosphate deaminase/isomerase |
| RA | 3,282,928 | T→A | 9.6% | I318N (ATC→AAC) ‡ | agaS → | putative galactosamine‑6‑phosphate deaminase/isomerase |
| RA | 3,282,929 | C→T | 9.6% | I318I (ATC→ATT) ‡ | agaS → | putative galactosamine‑6‑phosphate deaminase/isomerase |
| RA | 3,300,226 | Δ1 bp | 6.1% | coding (261/303 nt) | yhbQ → | DNA damage response nuclease YhbQ |
| RA | 3,300,230 | T→C | 6.1% | L89L (TTA→CTA) ‡ | yhbQ → | DNA damage response nuclease YhbQ |
| RA | 3,300,232 | A→T | 6.3% | L89F (TTA→TTT) ‡ | yhbQ → | DNA damage response nuclease YhbQ |
| RA | 3,300,234 | G→A | 6.1% | S90N (AGC→AAC) | yhbQ → | DNA damage response nuclease YhbQ |
| RA | 3,300,237:1 | +C | 6.3% | coding (272/303 nt) | yhbQ → | DNA damage response nuclease YhbQ |
| RA | 3,305,272 | G→A | 6.3% | N182N (AAC→AAT) | mtr ← | tryptophan:H(+) symporter Mtr |
| RA | 3,305,276 | A→T | 5.9% | F181Y (TTC→TAC) ‡ | mtr ← | tryptophan:H(+) symporter Mtr |
| RA | 3,305,277 | A→T | 5.3% | F181I (TTC→ATC) ‡ | mtr ← | tryptophan:H(+) symporter Mtr |
| RA | 3,309,004 | C→T | 9.1% | intergenic (‑80/+29) | nlpI ← / ← pnp | lipoprotein NlpI/polynucleotide phosphorylase |
| RA | 3,313,207 | G→A | 7.3% | intergenic (‑29/+135) | rbfA ← / ← infB | 30S ribosome binding factor/translation initiation factor IF‑2 |
| RA | 3,313,208 | T→A | 7.5% | intergenic (‑30/+134) | rbfA ← / ← infB | 30S ribosome binding factor/translation initiation factor IF‑2 |
| RA | 3,313,209 | T→C | 7.5% | intergenic (‑31/+133) | rbfA ← / ← infB | 30S ribosome binding factor/translation initiation factor IF‑2 |
| RA | 3,323,490 | A→C | 5.5% | L194R (CTG→CGG) | glmM ← | phosphoglucosamine mutase |
| RA | 3,328,182 | A→T | 6.1% | intergenic (+99/+57) | yhbY → / ← greA | ribosome assembly factor YhbY/transcription elongation factor GreA |
| RA | 3,328,183 | T→A | 6.8% | intergenic (+100/+56) | yhbY → / ← greA | ribosome assembly factor YhbY/transcription elongation factor GreA |
| RA | 3,328,184 | A→T | 5.9% | intergenic (+101/+55) | yhbY → / ← greA | ribosome assembly factor YhbY/transcription elongation factor GreA |
| RA | 3,330,407 | A→G | 5.9% | intergenic (+11/+175) | dacB → / ← obgE | peptidoglycan DD‑endopeptidase DacB/GTPase ObgE |
| RA | 3,330,415 | Δ1 bp | 7.2% | intergenic (+19/+167) | dacB → / ← obgE | peptidoglycan DD‑endopeptidase DacB/GTPase ObgE |
| RA | 3,330,419:1 | +T | 7.4% | intergenic (+23/+163) | dacB → / ← obgE | peptidoglycan DD‑endopeptidase DacB/GTPase ObgE |
| RA | 3,330,427 | C→T | 5.1% | intergenic (+31/+155) | dacB → / ← obgE | peptidoglycan DD‑endopeptidase DacB/GTPase ObgE |
| RA | 3,336,371 | G→T | 5.0% | Q42K (CAG→AAG) | murA ← | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| RA | 3,339,813 | T→C | 8.4% | K85E (AAA→GAA) | mlaF ← | intermembrane phospholipid transport system, ATP binding subunit MlaF |
| RA | 3,339,818 | Δ1 bp | 8.4% | coding (248/810 nt) | mlaF ← | intermembrane phospholipid transport system, ATP binding subunit MlaF |
| RA | 3,339,828:1 | +T | 8.4% | coding (238/810 nt) | mlaF ← | intermembrane phospholipid transport system, ATP binding subunit MlaF |
| RA | 3,339,833 | G→A | 8.7% | S78L (TCG→TTG) | mlaF ← | intermembrane phospholipid transport system, ATP binding subunit MlaF |
| RA | 3,360,643 | T→A | 7.2% | intergenic (+27/‑533) | gltD → / → gltF | glutamate synthase subunit GltD/periplasmic protein GltF |
| RA | 3,360,644 | G→C | 7.1% | intergenic (+28/‑532) | gltD → / → gltF | glutamate synthase subunit GltD/periplasmic protein GltF |
| RA | 3,360,645 | T→A | 7.3% | intergenic (+29/‑531) | gltD → / → gltF | glutamate synthase subunit GltD/periplasmic protein GltF |
| RA | 3,368,134 | A→G | 5.4% | H103R (CAC→CGC) | yhcG → | DUF1016 domain‑containing protein YhcG |
| RA | 3,368,142 | A→T | 5.3% | M106L (ATG→TTG) | yhcG → | DUF1016 domain‑containing protein YhcG |
| RA | 3,368,150 | C→T | 5.5% | G108G (GGC→GGT) | yhcG → | DUF1016 domain‑containing protein YhcG |
| RA | 3,368,982 | G→C | 7.5% | intergenic (+28/+32) | yhcG → / ← yhcH | DUF1016 domain‑containing protein YhcG/DUF386 domain‑containing protein YhcH |
| RA | 3,374,899 | T→A | 6.9% | L11I (TTA→ATA) ‡ | dcuD → | putative transporter DcuD |
| RA | 3,374,901 | A→T | 7.0% | L11F (TTA→TTT) ‡ | dcuD → | putative transporter DcuD |
| RA | 3,374,903 | T→A | 6.9% | I12N (ATT→AAT) | dcuD → | putative transporter DcuD |
| RA | 3,377,768 | C→T | 6.2% | intergenic (‑348/+47) | sspA ← / ← rpsI | stringent starvation protein A/30S ribosomal subunit protein S9 |
| RA | 3,377,769 | G→T | 6.1% | intergenic (‑349/+46) | sspA ← / ← rpsI | stringent starvation protein A/30S ribosomal subunit protein S9 |
| RA | 3,377,770 | A→C | 7.1% | intergenic (‑350/+45) | sspA ← / ← rpsI | stringent starvation protein A/30S ribosomal subunit protein S9 |
| RA | 3,377,771 | A→G | 6.2% | intergenic (‑351/+44) | sspA ← / ← rpsI | stringent starvation protein A/30S ribosomal subunit protein S9 |
| RA | 3,400,846 | A→T | 8.7% | I81N (ATC→AAC) | mreB ← | dynamic cytoskeletal protein MreB |
| RA | 3,400,849 | A→T | 8.2% | V80D (GTT→GAT) | mreB ← | dynamic cytoskeletal protein MreB |
| RA | 3,400,855 | T→A | 5.5% | D78V (GAC→GTC) | mreB ← | dynamic cytoskeletal protein MreB |
| RA | 3,405,586 | C→T | 8.1% | P51S (CCA→TCA) | accB → | biotin carboxyl carrier protein |
| RA | 3,405,589 | A→T | 7.8% | M52L (ATG→TTG) | accB → | biotin carboxyl carrier protein |
| RA | 3,405,592 | A→G | 8.2% | M53V (ATG→GTG) | accB → | biotin carboxyl carrier protein |
| RA | 3,418,628 | G→A | 6.4% | intergenic (+17/‑414) | yhdV → / → yhdW | lipoprotein YhdV/putative ABC transporter periplasmic binding protein YhdW |
| RA | 3,418,629 | T→C | 6.5% | intergenic (+18/‑413) | yhdV → / → yhdW | lipoprotein YhdV/putative ABC transporter periplasmic binding protein YhdW |
| RA | 3,431,811 | G→T | 5.4% | A51E (GCG→GAG) | yrdD ← | putative DNA topoisomerase |
| RA | 3,431,817 | G→A | 5.1% | S49F (TCT→TTT) ‡ | yrdD ← | putative DNA topoisomerase |
| RA | 3,431,818 | A→T | 5.1% | S49T (TCT→ACT) ‡ | yrdD ← | putative DNA topoisomerase |
| RA | 3,431,819 | T→C | 5.1% | K48K (AAA→AAG) | yrdD ← | putative DNA topoisomerase |
| RA | 3,431,825 | A→C | 5.1% | P46P (CCT→CCG) | yrdD ← | putative DNA topoisomerase |
| RA | 3,437,908 | T→A | 6.1% | intergenic (+14/‑116) | trkA → / → mscL | NAD‑binding component of Trk potassium transporters/large conductance mechanosensitive channel |
| RA | 3,437,909 | A→T | 6.2% | intergenic (+15/‑115) | trkA → / → mscL | NAD‑binding component of Trk potassium transporters/large conductance mechanosensitive channel |
| RA | 3,437,910 | A→T | 6.3% | intergenic (+16/‑114) | trkA → / → mscL | NAD‑binding component of Trk potassium transporters/large conductance mechanosensitive channel |
| RA | 3,437,911 | T→A | 6.2% | intergenic (+17/‑113) | trkA → / → mscL | NAD‑binding component of Trk potassium transporters/large conductance mechanosensitive channel |
| RA | 3,439,588 | G→C | 7.4% | intergenic (‑79/+28) | yhdN ← / ← rplQ | conserved protein YhdN/50S ribosomal subunit protein L17 |
| RA | 3,439,589 | G→C | 7.7% | intergenic (‑80/+27) | yhdN ← / ← rplQ | conserved protein YhdN/50S ribosomal subunit protein L17 |
| RA | 3,441,060 | T→C | 10.5% | K206E (AAG→GAG) | rpsD ← | 30S ribosomal subunit protein S4 |
| RA | 3,441,061 | G→C | 10.4% | S205S (TCC→TCG) ‡ | rpsD ← | 30S ribosomal subunit protein S4 |
| RA | 3,441,062 | G→A | 10.7% | S205F (TCC→TTC) ‡ | rpsD ← | 30S ribosomal subunit protein S4 |
| RA | 3,448,275 | T→G | 8.0% | intergenic (‑126/+39) | rplN ← / ← rpsQ | 50S ribosomal subunit protein L14/30S ribosomal subunit protein S17 |
| RA | 3,448,276 | T→A | 7.9% | intergenic (‑127/+38) | rplN ← / ← rpsQ | 50S ribosomal subunit protein L14/30S ribosomal subunit protein S17 |
| RA | 3,448,277 | T→A | 8.4% | intergenic (‑128/+37) | rplN ← / ← rpsQ | 50S ribosomal subunit protein L14/30S ribosomal subunit protein S17 |
| RA | 3,448,278 | C→A | 8.5% | intergenic (‑129/+36) | rplN ← / ← rpsQ | 50S ribosomal subunit protein L14/30S ribosomal subunit protein S17 |
| RA | 3,470,106 | C→T | 7.4% | intergenic (‑253/+39) | chiA ← / ← tufA | endochitinase/translation elongation factor Tu 1 |
| RA | 3,470,107 | G→T | 7.6% | intergenic (‑254/+38) | chiA ← / ← tufA | endochitinase/translation elongation factor Tu 1 |
| RA | 3,470,108 | A→C | 7.3% | intergenic (‑255/+37) | chiA ← / ← tufA | endochitinase/translation elongation factor Tu 1 |
| RA | 3,470,109 | A→G | 7.2% | intergenic (‑256/+36) | chiA ← / ← tufA | endochitinase/translation elongation factor Tu 1 |
| RA | 3,474,031 | C→G | 6.4% | K17N (AAG→AAC) | rpsG ← | 30S ribosomal subunit protein S7 |
| RA | 3,474,608 | C→T | 8.1% | intergenic (‑56/+70) | rpsL ← / ← tusB | 30S ribosomal subunit protein S12/sulfurtransferase complex subunit TusB |
| RA | 3,474,610 | C→T | 8.1% | intergenic (‑58/+68) | rpsL ← / ← tusB | 30S ribosomal subunit protein S12/sulfurtransferase complex subunit TusB |
| RA | 3,474,611 | A→T | 8.2% | intergenic (‑59/+67) | rpsL ← / ← tusB | 30S ribosomal subunit protein S12/sulfurtransferase complex subunit TusB |
| RA | 3,474,612 | A→G | 7.9% | intergenic (‑60/+66) | rpsL ← / ← tusB | 30S ribosomal subunit protein S12/sulfurtransferase complex subunit TusB |
| RA | 3,474,614 | A→G | 7.8% | intergenic (‑62/+64) | rpsL ← / ← tusB | 30S ribosomal subunit protein S12/sulfurtransferase complex subunit TusB |
| RA | 3,477,878 | T→A | 11.9% | intergenic (+20/+29) | slyX → / ← slyD | protein SlyX/FKBP‑type peptidyl‑prolyl cis‑trans isomerase SlyD |
| RA | 3,480,662 | T→A | 7.1% | H167L (CAC→CTC) | kefG ← | protein required for KefB activity |
| RA | 3,480,664 | G→C | 7.4% | S166R (AGC→AGG) ‡ | kefG ← | protein required for KefB activity |
| RA | 3,480,666 | T→A | 7.0% | S166C (AGC→TGC) ‡ | kefG ← | protein required for KefB activity |
| RA | 3,484,056 | T→C | 9.2% | H285H (CAT→CAC) | yheT → | putative hydrolase YheT |
| RA | 3,484,058 | A→T | 9.2% | Q286L (CAG→CTG) | yheT → | putative hydrolase YheT |
| RA | 3,484,060 | G→A | 8.9% | V287M (GTG→ATG) | yheT → | putative hydrolase YheT |
| RA | 3,503,970 | G→A | 5.6% | intergenic (+18/‑82) | frlD → / → frlR | fructoselysine 6‑kinase/putative DNA‑binding transcriptional regulator FrlR |
| RA | 3,503,971 | C→G | 5.6% | intergenic (+19/‑81) | frlD → / → frlR | fructoselysine 6‑kinase/putative DNA‑binding transcriptional regulator FrlR |
| RA | 3,503,974 | C→G | 5.7% | intergenic (+22/‑78) | frlD → / → frlR | fructoselysine 6‑kinase/putative DNA‑binding transcriptional regulator FrlR |
| RA | 3,503,975 | T→C | 5.8% | intergenic (+23/‑77) | frlD → / → frlR | fructoselysine 6‑kinase/putative DNA‑binding transcriptional regulator FrlR |
| RA | 3,512,585 | T→G | 5.1% | intergenic (‑241/+49) | yhfZ ← / ← trpS | putative DNA‑binding transcriptional regulator YhfZ/tryptophan‑‑tRNA ligase |
| RA | 3,512,586 | C→A | 5.1% | intergenic (‑242/+48) | yhfZ ← / ← trpS | putative DNA‑binding transcriptional regulator YhfZ/tryptophan‑‑tRNA ligase |
| RA | 3,512,593 | C→T | 5.1% | intergenic (‑249/+41) | yhfZ ← / ← trpS | putative DNA‑binding transcriptional regulator YhfZ/tryptophan‑‑tRNA ligase |
| RA | 3,523,918 | C→G | 5.3% | L350V (CTG→GTG) | mrcA → | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA |
| RA | 3,523,921 | C→A | 6.4% | P351T (CCT→ACT) | mrcA → | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA |
| RA | 3,523,926 | C→G | 6.3% | A352A (GCC→GCG) | mrcA → | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA |
| RA | 3,523,931 | T→G | 5.5% | V354G (GTC→GGC) | mrcA → | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA |
| RA | 3,523,934 | C→G | 5.4% | T355S (ACC→AGC) | mrcA → | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcA |
| RA | 3,539,815 | A→T | 6.4% | intergenic (+109/‑348) | yhgF → / → feoA | putative RNA‑binding protein YhgF/ferrous iron transport protein A |
| RA | 3,539,816 | T→A | 5.4% | intergenic (+110/‑347) | yhgF → / → feoA | putative RNA‑binding protein YhgF/ferrous iron transport protein A |
| RA | 3,539,817 | A→T | 5.4% | intergenic (+111/‑346) | yhgF → / → feoA | putative RNA‑binding protein YhgF/ferrous iron transport protein A |
| RA | 3,548,565 | C→A | 11.7% | P502P (CCG→CCT) | malQ ← | 4‑alpha‑glucanotransferase |
| RA | 3,560,455:1 | +G | 100% | pseudogene (151/758 nt) | glpR ← | DNA‑binding transcriptional repressor GlpR |
| RA | 3,569,436 | G→A | 5.5% | H628H (CAC→CAT) | glgX ← | limit dextrin alpha‑1,6‑glucohydrolase |
| RA | 3,570,714:1 | +T | 5.6% | coding (606/1974 nt) | glgX ← | limit dextrin alpha‑1,6‑glucohydrolase |
| RA | 3,570,719 | C→G | 5.4% | V201L (GTG→CTG) | glgX ← | limit dextrin alpha‑1,6‑glucohydrolase |
| RA | 3,570,724 | Δ1 bp | 5.7% | coding (596/1974 nt) | glgX ← | limit dextrin alpha‑1,6‑glucohydrolase |
| RA | 3,598,473 | A→G | 5.3% | intergenic (+106/+82) | panZ → / ← livJ | PanD maturation factor/branched chain amino acid/phenylalanine ABC transporter periplasmic binding protein |
| RA | 3,601,505 | A→C | 5.3% | R194R (CGT→CGG) | ftsX ← | cell division protein FtsX |
| RA | 3,616,399 | T→G | 5.1% | V73G (GTG→GGG) | nikC → | Ni(2(+)) ABC transporter membrane subunit NikC |
| RA | 3,647,670 | T→C | 5.9% | intergenic (+19/+35) | gor → / ← dinQ | glutathione reductase (NADPH)/UV inducible membrane toxin DinQ |
| RA | 3,647,672 | G→C | 6.2% | intergenic (+21/+33) | gor → / ← dinQ | glutathione reductase (NADPH)/UV inducible membrane toxin DinQ |
| RA | 3,647,673 | T→A | 6.0% | intergenic (+22/+32) | gor → / ← dinQ | glutathione reductase (NADPH)/UV inducible membrane toxin DinQ |
| RA | 3,647,674 | G→C | 6.2% | intergenic (+23/+31) | gor → / ← dinQ | glutathione reductase (NADPH)/UV inducible membrane toxin DinQ |
| RA | 3,647,676 | G→A | 8.0% | intergenic (+25/+29) | gor → / ← dinQ | glutathione reductase (NADPH)/UV inducible membrane toxin DinQ |
| RA | 3,657,599 | T→A | 8.5% | intergenic (+32/+387) | hdeD → / ← arrS | acid‑resistance membrane protein/small regulatory RNA ArrS |
| RA | 3,657,601 | G→C | 8.4% | intergenic (+34/+385) | hdeD → / ← arrS | acid‑resistance membrane protein/small regulatory RNA ArrS |
| RA | 3,657,603 | T→A | 8.5% | intergenic (+36/+383) | hdeD → / ← arrS | acid‑resistance membrane protein/small regulatory RNA ArrS |
| RA | 3,658,002 | C→T | 7.1% | noncoding (53/69 nt) | arrS ← | small regulatory RNA ArrS |
| RA | 3,658,003 | C→G | 7.0% | noncoding (52/69 nt) | arrS ← | small regulatory RNA ArrS |
| RA | 3,658,004 | A→G | 7.2% | noncoding (51/69 nt) | arrS ← | small regulatory RNA ArrS |
| RA | 3,659,467 | A→C | 7.3% | E79A (GAA→GCA) ‡ | mdtE → | multidrug efflux pump membrane fusion protein MdtE |
| RA | 3,659,468 | A→C | 7.3% | E79D (GAA→GAC) ‡ | mdtE → | multidrug efflux pump membrane fusion protein MdtE |
| RA | 3,659,469 | G→T | 7.4% | G80C (GGC→TGC) ‡ | mdtE → | multidrug efflux pump membrane fusion protein MdtE |
| RA | 3,659,470 | G→T | 7.3% | G80V (GGC→GTC) ‡ | mdtE → | multidrug efflux pump membrane fusion protein MdtE |
| RA | 3,700,416 | T→C | 8.0% | intergenic (+217/‑147) | rdlD → / → yhjV | antisense regulatory RNA RdlD/putative transporter YhjV |
| RA | 3,702,835 | G→A | 6.5% | L12L (CTG→TTG) | dppF ← | dipeptide ABC transporter ATP binding subunit DppF |
| RA | 3,702,837 | G→C | 7.0% | P11R (CCG→CGG) | dppF ← | dipeptide ABC transporter ATP binding subunit DppF |
| RA | 3,702,839 | T→C | 6.2% | Q10Q (CAA→CAG) | dppF ← | dipeptide ABC transporter ATP binding subunit DppF |
| RA | 3,708,427 | G→A | 6.4% | intergenic (‑722/+189) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,708,428 | T→A | 6.3% | intergenic (‑723/+188) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,708,429 | T→C | 6.5% | intergenic (‑724/+187) | dppA ← / ← proK | dipeptide ABC transporter periplasmic binding protein/tRNA‑Pro |
| RA | 3,713,362 | A→T | 5.1% | K91* (AAA→TAA) | tag → | 3‑methyl‑adenine DNA glycosylase I, constitutive |
| RA | 3,716,507 | A→G | 7.9% | intergenic (‑113/‑40) | bisC ← / → yiaD | biotin sulfoxide reductase/PF13488 family lipoprotein YiaD |
| RA | 3,716,508 | A→T | 7.8% | intergenic (‑114/‑39) | bisC ← / → yiaD | biotin sulfoxide reductase/PF13488 family lipoprotein YiaD |
| RA | 3,716,509 | C→T | 8.0% | intergenic (‑115/‑38) | bisC ← / → yiaD | biotin sulfoxide reductase/PF13488 family lipoprotein YiaD |
| RA | 3,719,803 | A→T | 7.6% | intergenic (+35/‑246) | yiaG → / → cspA | putative DNA‑binding transcriptional regulator YiaG/cold shock protein CspA |
| RA | 3,719,804 | T→C | 7.7% | intergenic (+36/‑245) | yiaG → / → cspA | putative DNA‑binding transcriptional regulator YiaG/cold shock protein CspA |
| RA | 3,719,805 | G→A | 7.7% | intergenic (+37/‑244) | yiaG → / → cspA | putative DNA‑binding transcriptional regulator YiaG/cold shock protein CspA |
| RA | 3,719,806 | A→T | 7.6% | intergenic (+38/‑243) | yiaG → / → cspA | putative DNA‑binding transcriptional regulator YiaG/cold shock protein CspA |
| RA | 3,732,136 | A→C | 7.0% | intergenic (+13/‑65) | xylF → / → xylG | xylose ABC transporter periplasmic binding protein/xylose ABC transporter ATP binding subunit |
| RA | 3,732,139 | G→T | 6.1% | intergenic (+16/‑62) | xylF → / → xylG | xylose ABC transporter periplasmic binding protein/xylose ABC transporter ATP binding subunit |
| RA | 3,732,141 | G→C | 6.9% | intergenic (+18/‑60) | xylF → / → xylG | xylose ABC transporter periplasmic binding protein/xylose ABC transporter ATP binding subunit |
| RA | 3,732,143 | A→C | 6.0% | intergenic (+20/‑58) | xylF → / → xylG | xylose ABC transporter periplasmic binding protein/xylose ABC transporter ATP binding subunit |
| RA | 3,736,322 | G→T | 8.2% | intergenic (+165/+31) | xylR → / ← bax | DNA‑binding transcriptional dual regulator XylR/putative glycoside hydrolase Bax |
| RA | 3,736,323 | A→G | 7.9% | intergenic (+166/+30) | xylR → / ← bax | DNA‑binding transcriptional dual regulator XylR/putative glycoside hydrolase Bax |
| RA | 3,736,324 | C→T | 8.3% | intergenic (+167/+29) | xylR → / ← bax | DNA‑binding transcriptional dual regulator XylR/putative glycoside hydrolase Bax |
| RA | 3,736,325 | A→C | 8.4% | intergenic (+168/+28) | xylR → / ← bax | DNA‑binding transcriptional dual regulator XylR/putative glycoside hydrolase Bax |
| RA | 3,758,650 | A→G | 8.6% | I404I (ATT→ATC) ‡ | selB ← | selenocysteyl‑tRNA‑specific translation elongation factor |
| RA | 3,758,651 | A→T | 8.9% | I404N (ATT→AAT) ‡ | selB ← | selenocysteyl‑tRNA‑specific translation elongation factor |
| RA | 3,758,656 | A→T | 8.8% | G402G (GGT→GGA) ‡ | selB ← | selenocysteyl‑tRNA‑specific translation elongation factor |
| RA | 3,758,657 | C→T | 9.1% | G402D (GGT→GAT) ‡ | selB ← | selenocysteyl‑tRNA‑specific translation elongation factor |
| RA | 3,771,187 | G→C | 5.4% | P65A (CCT→GCT) | yibH ← | inner membrane protein YibH |
| RA | 3,771,192 | G→C | 5.4% | A63G (GCG→GGG) | yibH ← | inner membrane protein YibH |
| RA | 3,790,300 | A→T | 7.4% | intergenic (‑219/+20) | waaH ← / ← tdh | UDP‑glucuronate:LPS(HepIII) glycosyltransferase/threonine dehydrogenase |
| RA | 3,790,303 | A→T | 6.6% | intergenic (‑222/+17) | waaH ← / ← tdh | UDP‑glucuronate:LPS(HepIII) glycosyltransferase/threonine dehydrogenase |
| RA | 3,792,765 | C→T | 6.1% | intergenic (‑214/+61) | kbl ← / ← htrL | 2‑amino‑3‑ketobutyrate CoA ligase/protein HtrL |
| RA | 3,792,766 | A→T | 6.1% | intergenic (‑215/+60) | kbl ← / ← htrL | 2‑amino‑3‑ketobutyrate CoA ligase/protein HtrL |
| RA | 3,792,767 | A→T | 5.8% | intergenic (‑216/+59) | kbl ← / ← htrL | 2‑amino‑3‑ketobutyrate CoA ligase/protein HtrL |
| RA | 3,792,768 | A→G | 6.1% | intergenic (‑217/+58) | kbl ← / ← htrL | 2‑amino‑3‑ketobutyrate CoA ligase/protein HtrL |
| RA | 3,794,970 | G→C | 6.4% | M14I (ATG→ATC) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,794,973 | G→C | 6.4% | M15I (ATG→ATC) | waaF → | ADP‑heptose‑‑LPS heptosyltransferase 2 |
| RA | 3,798,234 | A→T | 7.3% | intergenic (+27/+5) | waaL → / ← waaU | O‑antigen ligase/putative ADP‑heptose:LPS heptosyltransferase 4 |
| RA | 3,798,235 | A→T | 7.3% | intergenic (+28/+4) | waaL → / ← waaU | O‑antigen ligase/putative ADP‑heptose:LPS heptosyltransferase 4 |
| RA | 3,804,012 | A→G | 9.2% | N42N (AAT→AAC) ‡ | waaB ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| RA | 3,804,014 | T→A | 9.2% | N42Y (AAT→TAT) ‡ | waaB ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| RA | 3,804,016 | C→T | 9.3% | R41H (CGT→CAT) | waaB ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| RA | 3,809,354 | A→G | 10.5% | E272G (GAA→GGA) | waaA → | KDO transferase |
| RA | 3,809,356 | C→A | 10.3% | R273S (CGC→AGC) | waaA → | KDO transferase |
| RA | 3,809,359 | T→G | 10.3% | F274V (TTC→GTC) ‡ | waaA → | KDO transferase |
| RA | 3,809,361 | C→T | 10.2% | F274F (TTC→TTT) ‡ | waaA → | KDO transferase |
| RA | 3,810,321 | T→C | 5.6% | intergenic (+17/+22) | coaD → / ← mutM | pantetheine‑phosphate adenylyltransferase/DNA‑formamidopyrimidine glycosylase |
| RA | 3,814,164 | G→A | 7.6% | G78D (GGT→GAT) | dut → | deoxyuridine triphosphatase |
| RA | 3,814,167 | T→C | 7.6% | I79T (ATC→ACC) | dut → | deoxyuridine triphosphatase |
| RA | 3,815,108 | T→A | 6.3% | intergenic (+18/+19) | slmA → / ← pyrE | nucleoid occlusion factor SlmA/orotate phosphoribosyltransferase |
| RA | 3,815,816 | C→G | 5.5% | intergenic (‑48/+47) | pyrE ← / ← rph | orotate phosphoribosyltransferase/truncated RNase PH |
| RA | 3,815,819 | C→G | 5.5% | intergenic (‑51/+44) | pyrE ← / ← rph | orotate phosphoribosyltransferase/truncated RNase PH |
| MC JC | 3,815,859 | Δ82 bp | 100% | [rph] | [rph] | |
| RA | 3,820,243:1 | +T | 5.6% | coding (928/1683 nt) | ligB ← | DNA ligase B |
| RA | 3,820,248 | Δ1 bp | 5.5% | coding (923/1683 nt) | ligB ← | DNA ligase B |
| RA | 3,831,811 | C→G | 5.0% | T452S (ACC→AGC) | yicH → | AsmA famly protein YicH |
| RA | 3,839,567 | G→C | 5.4% | L143V (CTT→GTT) | nlpA ← | lipoprotein‑28 |
| RA | 3,839,568 | G→C | 5.4% | N142K (AAC→AAG) | nlpA ← | lipoprotein‑28 |
| RA | 3,888,212 | Δ1 bp | 5.3% | intergenic (+20/‑223) | mnmE → / → tnaC | 5‑carboxymethylaminomethyluridine‑tRNA synthase GTPase subunit/tnaAB operon leader peptide |
| RA | 3,888,219 | T→A | 5.1% | intergenic (+27/‑216) | mnmE → / → tnaC | 5‑carboxymethylaminomethyluridine‑tRNA synthase GTPase subunit/tnaAB operon leader peptide |
| RA | 3,891,502 | C→G | 7.9% | intergenic (+19/‑113) | tnaB → / → mdtL | tryptophan:H(+) symporter TnaB/efflux pump MdtL |
| RA | 3,891,504 | T→A | 7.0% | intergenic (+21/‑111) | tnaB → / → mdtL | tryptophan:H(+) symporter TnaB/efflux pump MdtL |
| RA | 3,891,506 | C→G | 6.5% | intergenic (+23/‑109) | tnaB → / → mdtL | tryptophan:H(+) symporter TnaB/efflux pump MdtL |
| RA | 3,900,542 | A→T | 10.5% | I12I (ATT→ATA) | yieL ← | putative hydrolase YieL |
| RA | 3,900,545 | A→T | 10.8% | A11A (GCT→GCA) | yieL ← | putative hydrolase YieL |
| RA | 3,903,952 | C→T | 6.1% | G549D (GGT→GAT) | bglF ← | beta‑glucoside specific PTS enzyme II/BglG kinase/BglG phosphatase |
| RA | 3,920,796 | T→C | 6.5% | A31A (GCA→GCG) | atpF ← | ATP synthase Fo complex subunit b |
| RA | 3,920,809 | G→A | 6.1% | P27L (CCG→CTG) | atpF ← | ATP synthase Fo complex subunit b |
| RA | 3,927,123 | A→T | 7.4% | intergenic (‑120/‑32) | asnC ← / → asnA | DNA‑binding transcriptional dual regulator AsnC/asparagine synthetase A |
| RA | 3,927,124 | T→G | 7.6% | intergenic (‑121/‑31) | asnC ← / → asnA | DNA‑binding transcriptional dual regulator AsnC/asparagine synthetase A |
| RA | 3,927,125 | C→A | 7.6% | intergenic (‑122/‑30) | asnC ← / → asnA | DNA‑binding transcriptional dual regulator AsnC/asparagine synthetase A |
| RA | 3,927,126 | A→T | 7.5% | intergenic (‑123/‑29) | asnC ← / → asnA | DNA‑binding transcriptional dual regulator AsnC/asparagine synthetase A |
| RA | 3,935,569 | A→C | 5.2% | E94D (GAA→GAC) | rbsC → | ribose ABC transporter membrane subunit |
| RA | 3,959,924 | A→T | 6.1% | intergenic (‑111/+88) | ppiC ← / ← yifN | peptidyl‑prolyl cis‑trans isomerase C/putative toxin YifN |
| RA | 3,959,925 | A→T | 5.9% | intergenic (‑112/+87) | ppiC ← / ← yifN | peptidyl‑prolyl cis‑trans isomerase C/putative toxin YifN |
| RA | 3,959,926 | A→T | 6.1% | intergenic (‑113/+86) | ppiC ← / ← yifN | peptidyl‑prolyl cis‑trans isomerase C/putative toxin YifN |
| RA | 3,966,768 | G→T | 6.7% | E118* (GAA→TAA) ‡ | rho → | transcription termination factor Rho |
| RA | 3,966,769 | A→T | 7.0% | E118V (GAA→GTA) ‡ | rho → | transcription termination factor Rho |
| RA | 3,966,770 | A→C | 8.0% | E118D (GAA→GAC) ‡ | rho → | transcription termination factor Rho |
| RA | 3,969,429 | A→C | 5.5% | K133N (AAA→AAC) | wzzE → | enterobacterial common antigen polysaccharide co‑polymerase |
| RA | 3,969,434 | A→C | 5.7% | D135A (GAT→GCT) ‡ | wzzE → | enterobacterial common antigen polysaccharide co‑polymerase |
| RA | 3,969,435 | T→A | 6.6% | D135E (GAT→GAA) ‡ | wzzE → | enterobacterial common antigen polysaccharide co‑polymerase |
| RA | 3,969,436 | G→T | 5.7% | A136S (GCG→TCG) | wzzE → | enterobacterial common antigen polysaccharide co‑polymerase |
| RA | 3,969,441 | G→T | 5.7% | A137A (GCG→GCT) | wzzE → | enterobacterial common antigen polysaccharide co‑polymerase |
| RA | 3,972,674 | G→T | 7.2% | E51D (GAG→GAT) | rffG → | dTDP‑glucose 4,6‑dehydratase 2 |
| RA | 3,975,732 | A→C | 7.7% | D196A (GAT→GCT) | wecE → | dTDP‑4‑dehydro‑6‑deoxy‑D‑glucose transaminase |
| RA | 3,975,734 | A→T | 8.3% | K197* (AAA→TAA) ‡ | wecE → | dTDP‑4‑dehydro‑6‑deoxy‑D‑glucose transaminase |
| RA | 3,975,735 | A→T | 7.8% | K197I (AAA→ATA) ‡ | wecE → | dTDP‑4‑dehydro‑6‑deoxy‑D‑glucose transaminase |
| RA | 3,975,737 | G→T | 8.3% | A198S (GCG→TCG) | wecE → | dTDP‑4‑dehydro‑6‑deoxy‑D‑glucose transaminase |
| RA | 3,995,716 | A→G | 5.3% | H45R (CAT→CGT) | yigA → | conserved protein YigA |
| RA | 3,995,718 | C→A | 5.2% | P46T (CCG→ACG) | yigA → | conserved protein YigA |
| RA | 3,995,722 | T→G | 5.1% | V47G (GTA→GGA) | yigA → | conserved protein YigA |
| RA | 3,995,724 | C→T | 5.2% | R48C (CGC→TGC) | yigA → | conserved protein YigA |
| RA | 3,998,147 | C→A | 6.3% | Y55* (TAC→TAA) | uvrD → | ssDNA translocase and dsDNA helicase ‑ DNA helicase II |
| RA | 3,998,152 | T→G | 6.3% | I57S (ATT→AGT) | uvrD → | ssDNA translocase and dsDNA helicase ‑ DNA helicase II |
| JC | 4,001,645 | Δ5 bp | 100% | coding (220‑224/951 nt) | corA → | Ni(2(+))/Co(2(+))/Mg(2(+)) transporter |
| RA | 4,007,485 | A→G | 8.2% | K541R (AAA→AGA) ‡ | recQ → | ATP‑dependent DNA helicase RecQ |
| RA | 4,007,486 | A→T | 7.8% | K541N (AAA→AAT) ‡ | recQ → | ATP‑dependent DNA helicase RecQ |
| RA | 4,007,487 | C→T | 8.0% | L542L (CTG→TTG) | recQ → | ATP‑dependent DNA helicase RecQ |
| RA | 4,008,408 | A→G | 9.9% | intergenic (+31/+31) | rhtC → / ← rhtB | L‑threonine exporter/L‑homoserine/L‑homoserine lactone/L‑threonine exporter |
| RA | 4,008,409 | A→C | 9.9% | intergenic (+32/+30) | rhtC → / ← rhtB | L‑threonine exporter/L‑homoserine/L‑homoserine lactone/L‑threonine exporter |
| RA | 4,008,415 | T→A | 11.0% | intergenic (+38/+24) | rhtC → / ← rhtB | L‑threonine exporter/L‑homoserine/L‑homoserine lactone/L‑threonine exporter |
| RA | 4,008,416 | T→A | 11.1% | intergenic (+39/+23) | rhtC → / ← rhtB | L‑threonine exporter/L‑homoserine/L‑homoserine lactone/L‑threonine exporter |
| RA | 4,008,422 | G→T | 8.0% | intergenic (+45/+17) | rhtC → / ← rhtB | L‑threonine exporter/L‑homoserine/L‑homoserine lactone/L‑threonine exporter |
| RA | 4,008,423 | C→T | 7.9% | intergenic (+46/+16) | rhtC → / ← rhtB | L‑threonine exporter/L‑homoserine/L‑homoserine lactone/L‑threonine exporter |
| RA | 4,022,007 | C→T | 5.6% | G21G (GGC→GGT) | tatA → | twin arginine protein translocation system ‑ TatA protein |
| RA | 4,022,008 | A→G | 5.5% | T22A (ACC→GCC) | tatA → | twin arginine protein translocation system ‑ TatA protein |
| RA | 4,028,482 | T→G | 9.6% | A97A (GCA→GCC) ‡ | fadA ← | 3‑ketoacyl‑CoA thiolase |
| RA | 4,028,483 | G→C | 10.0% | A97G (GCA→GGA) ‡ | fadA ← | 3‑ketoacyl‑CoA thiolase |
| RA | 4,028,484 | C→A | 9.5% | A97S (GCA→TCA) ‡ | fadA ← | 3‑ketoacyl‑CoA thiolase |
| RA | 4,041,216 | T→C | 7.7% | Q73R (CAG→CGG) ‡ | mobB ← | molybdopterin‑guanine dinucleotide biosynthesis adaptor protein |
| RA | 4,041,217 | G→A | 7.6% | Q73* (CAG→TAG) ‡ | mobB ← | molybdopterin‑guanine dinucleotide biosynthesis adaptor protein |
| RA | 4,041,220 | T→C | 7.6% | S72G (AGC→GGC) | mobB ← | molybdopterin‑guanine dinucleotide biosynthesis adaptor protein |
| RA | 4,041,221 | G→A | 7.6% | A71A (GCC→GCT) | mobB ← | molybdopterin‑guanine dinucleotide biosynthesis adaptor protein |
| RA | 4,060,261 | G→T | 8.4% | intergenic (+31/‑186) | bipA → / → yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| RA | 4,060,264 | A→C | 8.5% | intergenic (+34/‑183) | bipA → / → yihL | ribosome‑dependent GTPase, ribosome assembly factor/putative transcriptional regulator YihL |
| RA | 4,062,371 | A→T | 5.3% | N42I (AAT→ATT) | yihN → | putative transporter YihN |
| RA | 4,062,811 | C→A | 8.6% | L189M (CTG→ATG) ‡ | yihN → | putative transporter YihN |
| RA | 4,062,813 | G→T | 7.8% | L189L (CTG→CTT) ‡ | yihN → | putative transporter YihN |
| RA | 4,062,814 | A→C | 7.3% | N190H (AAT→CAT) ‡ | yihN → | putative transporter YihN |
| RA | 4,062,816 | T→G | 6.5% | N190K (AAT→AAG) ‡ | yihN → | putative transporter YihN |
| RA | 4,071,615 | T→C | 7.2% | T48A (ACC→GCC) | yihS ← | sulfoquinovose isomerase |
| RA | 4,071,616 | G→A | 7.2% | G47G (GGC→GGT) | yihS ← | sulfoquinovose isomerase |
| RA | 4,094,696 | A→C | 5.3% | intergenic (‑424/+27) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,094,709 | G→T | 5.5% | intergenic (‑437/+14) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,094,710 | C→T | 5.3% | intergenic (‑438/+13) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,118,828 | T→G | 5.4% | intergenic (+68/+17) | zapB → / ← rraA | cell division factor ZapB/ribonuclease E inhibitor protein A |
| RA | 4,118,829 | T→C | 5.4% | intergenic (+69/+16) | zapB → / ← rraA | cell division factor ZapB/ribonuclease E inhibitor protein A |
| RA | 4,118,830 | G→A | 5.4% | intergenic (+70/+15) | zapB → / ← rraA | cell division factor ZapB/ribonuclease E inhibitor protein A |
| RA | 4,118,831 | C→A | 5.2% | intergenic (+71/+14) | zapB → / ← rraA | cell division factor ZapB/ribonuclease E inhibitor protein A |
| RA | 4,130,005 | G→A | 7.7% | L57L (TTG→TTA) | metL → | fused aspartate kinase/homoserine dehydrogenase 2 |
| RA | 4,130,008 | T→C | 7.8% | I58I (ATT→ATC) | metL → | fused aspartate kinase/homoserine dehydrogenase 2 |
| RA | 4,147,304 | G→C | 5.2% | R56P (CGG→CCG) | frwD → | putative PTS enzyme IIB component FrwD |
| RA | 4,148,049 | C→G | 5.7% | G90A (GGC→GCC) | yijO ← | putative DNA‑binding transcriptional regulator YijO |
| RA | 4,153,570 | G→A | 6.0% | intergenic (‑472/+126) | ppc ← / ← argE | phosphoenolpyruvate carboxylase/acetylornithine deacetylase |
| RA | 4,175,565 | C→T | 5.2% | intergenic (+9/‑108) | tyrU → / → glyT | tRNA‑Tyr/tRNA‑Gly |
| RA | 4,177,171 | T→A | 6.3% | intergenic (+43/‑187) | tufB → / → secE | translation elongation factor Tu 2/Sec translocon subunit SecE |
| RA | 4,177,172 | T→A | 6.1% | intergenic (+44/‑186) | tufB → / → secE | translation elongation factor Tu 2/Sec translocon subunit SecE |
| RA | 4,184,543 | C→A | 100% | P1100Q (CCG→CAG) | rpoB → | RNA polymerase subunit beta |
| RA | 4,262,250 | G→C | 10.6% | G194G (GGG→GGC) | dusA → | tRNA‑dihydrouridine synthase A |
| RA | 4,262,255 | G→C | 10.5% | S196T (AGC→ACC) | dusA → | tRNA‑dihydrouridine synthase A |
| RA | 4,270,142 | G→A | 9.2% | intergenic (+15/‑96) | aphA → / → yjbQ | acid phosphatase/phosphotransferase/UPF0047 protein YjbQ |
| RA | 4,270,144 | G→C | 9.3% | intergenic (+17/‑94) | aphA → / → yjbQ | acid phosphatase/phosphotransferase/UPF0047 protein YjbQ |
| RA | 4,270,146 | T→C | 9.7% | intergenic (+19/‑92) | aphA → / → yjbQ | acid phosphatase/phosphotransferase/UPF0047 protein YjbQ |
| RA | 4,281,677 | T→A | 7.0% | intergenic (+48/+106) | yjcE → / ← yjcF | putative transporter YjcE/pentapeptide repeat‑containing protein YjcF |
| RA | 4,281,678 | C→A | 6.3% | intergenic (+49/+105) | yjcE → / ← yjcF | putative transporter YjcE/pentapeptide repeat‑containing protein YjcF |
| RA | 4,281,679 | T→G | 6.5% | intergenic (+50/+104) | yjcE → / ← yjcF | putative transporter YjcE/pentapeptide repeat‑containing protein YjcF |
| RA | 4,281,680 | T→A | 6.5% | intergenic (+51/+103) | yjcE → / ← yjcF | putative transporter YjcE/pentapeptide repeat‑containing protein YjcF |
| RA | 4,283,230 | A→G | 6.7% | intergenic (‑155/+23) | yjcF ← / ← actP | pentapeptide repeat‑containing protein YjcF/acetate/glycolate:cation symporter |
| RA | 4,283,231 | G→T | 6.2% | intergenic (‑156/+22) | yjcF ← / ← actP | pentapeptide repeat‑containing protein YjcF/acetate/glycolate:cation symporter |
| RA | 4,283,232 | A→C | 6.1% | intergenic (‑157/+21) | yjcF ← / ← actP | pentapeptide repeat‑containing protein YjcF/acetate/glycolate:cation symporter |
| RA | 4,283,233 | C→T | 6.8% | intergenic (‑158/+20) | yjcF ← / ← actP | pentapeptide repeat‑containing protein YjcF/acetate/glycolate:cation symporter |
| RA | 4,287,734 | C→T | 5.6% | intergenic (‑363/‑30) | acs ← / → nrfA | acetyl‑CoA synthetase (AMP‑forming)/cytochrome c552 nitrite reductase |
| RA | 4,287,735 | A→T | 5.5% | intergenic (‑364/‑29) | acs ← / → nrfA | acetyl‑CoA synthetase (AMP‑forming)/cytochrome c552 nitrite reductase |
| RA | 4,287,736 | A→G | 5.5% | intergenic (‑365/‑28) | acs ← / → nrfA | acetyl‑CoA synthetase (AMP‑forming)/cytochrome c552 nitrite reductase |
| RA | 4,296,060 | C→T | 34.5% | intergenic (+266/+376) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,296,380:1 | +CG | 100% | intergenic (+586/+56) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| RA | 4,308,191 | G→T | 6.3% | F96L (TTC→TTA) ‡ | alsE ← | D‑allulose‑6‑phosphate 3‑epimerase |
| RA | 4,308,192 | A→T | 6.9% | F96Y (TTC→TAC) ‡ | alsE ← | D‑allulose‑6‑phosphate 3‑epimerase |
| RA | 4,308,193 | A→C | 6.7% | F96V (TTC→GTC) ‡ | alsE ← | D‑allulose‑6‑phosphate 3‑epimerase |
| RA | 4,309,870 | C→A | 6.2% | G371C (GGC→TGC) | alsA ← | D‑allose ABC transporter ATP binding subunit |
| RA | 4,309,875 | T→G | 6.2% | K369T (AAA→ACA) ‡ | alsA ← | D‑allose ABC transporter ATP binding subunit |
| RA | 4,309,876 | T→A | 6.2% | K369* (AAA→TAA) ‡ | alsA ← | D‑allose ABC transporter ATP binding subunit |
| RA | 4,309,877 | C→A | 6.2% | L368L (CTG→CTT) | alsA ← | D‑allose ABC transporter ATP binding subunit |
| RA | 4,325,281 | G→C | 5.1% | intergenic (‑116/+17) | phnC ← / ← yjdN | phosphonate ABC transporter ATP binding subunit/conserved protein YjdN |
| RA | 4,325,283 | G→C | 5.1% | intergenic (‑118/+15) | phnC ← / ← yjdN | phosphonate ABC transporter ATP binding subunit/conserved protein YjdN |
| RA | 4,325,285 | G→C | 5.1% | intergenic (‑120/+13) | phnC ← / ← yjdN | phosphonate ABC transporter ATP binding subunit/conserved protein YjdN |
| RA | 4,325,866 | A→T | 5.0% | intergenic (‑125/+533) | yjdN ← / ← yjdM | conserved protein YjdN/conserved protein YjdM |
| RA | 4,332,868 | G→T | 5.4% | R135R (CGC→CGA) | basS ← | sensory histidine kinase BasS |
| RA | 4,356,445 | A→T | 10.7% | intergenic (‑34/+25) | dtpC ← / ← cadA | dipeptide/tripeptide:H(+) symporter DtpC/lysine decarboxylase 1 |
| RA | 4,356,446 | A→T | 10.7% | intergenic (‑35/+24) | dtpC ← / ← cadA | dipeptide/tripeptide:H(+) symporter DtpC/lysine decarboxylase 1 |
| RA | 4,365,132 | T→G | 8.0% | A75A (GCA→GCC) ‡ | cutA ← | copper binding protein CutA |
| RA | 4,365,133 | G→C | 8.0% | A75G (GCA→GGA) ‡ | cutA ← | copper binding protein CutA |
| RA | 4,365,134 | C→A | 7.9% | A75S (GCA→TCA) ‡ | cutA ← | copper binding protein CutA |
| RA | 4,365,453 | A→C | 5.0% | intergenic (‑97/+19) | cutA ← / ← dcuA | copper binding protein CutA/C4‑dicarboxylate transporter DcuA |
| RA | 4,367,700 | G→T | 5.9% | L210M (CTG→ATG) | aspA ← | aspartate ammonia‑lyase |
| RA | 4,367,701 | G→C | 6.2% | I209M (ATC→ATG) ‡ | aspA ← | aspartate ammonia‑lyase |
| RA | 4,367,702 | A→C | 6.4% | I209S (ATC→AGC) ‡ | aspA ← | aspartate ammonia‑lyase |
| RA | 4,371,931 | G→T | 6.4% | E303* (GAA→TAA) ‡ | groL → | chaperonin GroEL |
| RA | 4,371,932 | A→C | 6.7% | E303A (GAA→GCA) ‡ | groL → | chaperonin GroEL |
| RA | 4,383,867 | T→C | 5.2% | L10P (CTG→CCG) ‡ | yjeM → | putative transporter YjeM |
| RA | 4,383,868 | G→T | 5.1% | L10L (CTG→CTT) ‡ | yjeM → | putative transporter YjeM |
| RA | 4,383,871 | A→C | 5.0% | I11I (ATA→ATC) | yjeM → | putative transporter YjeM |
| RA | 4,385,206 | T→A | 5.3% | P456P (CCT→CCA) | yjeM → | putative transporter YjeM |
| RA | 4,385,207 | G→C | 5.4% | V457L (GTG→CTG) ‡ | yjeM → | putative transporter YjeM |
| RA | 4,385,208 | T→A | 5.4% | V457E (GTG→GAG) ‡ | yjeM → | putative transporter YjeM |
| RA | 4,390,401 | C→A | 5.9% | intergenic (‑41/+56) | psd ← / ← rsgA | phosphatidylserine decarboxylase proenzyme/ribosome small subunit‑dependent GTPase A |
| RA | 4,390,403 | A→G | 6.0% | intergenic (‑43/+54) | psd ← / ← rsgA | phosphatidylserine decarboxylase proenzyme/ribosome small subunit‑dependent GTPase A |
| RA | 4,390,404 | C→T | 6.0% | intergenic (‑44/+53) | psd ← / ← rsgA | phosphatidylserine decarboxylase proenzyme/ribosome small subunit‑dependent GTPase A |
| RA | 4,390,406 | T→G | 6.0% | intergenic (‑46/+51) | psd ← / ← rsgA | phosphatidylserine decarboxylase proenzyme/ribosome small subunit‑dependent GTPase A |
| RA | 4,398,309 | G→C | 6.6% | D300H (GAC→CAC) | mutL → | DNA mismatch repair protein MutL |
| RA | 4,400,322 | T→C | 5.3% | L12P (CTG→CCG) | hfq → | RNA‑binding protein Hfq |
| RA | 4,400,324 | Δ1 bp | 5.2% | coding (37/309 nt) | hfq → | RNA‑binding protein Hfq |
| RA | 4,400,334:1 | +T | 5.1% | coding (47/309 nt) | hfq → | RNA‑binding protein Hfq |
| RA | 4,400,337 | G→A | 5.3% | R17Q (CGG→CAG) | hfq → | RNA‑binding protein Hfq |
| RA | 4,407,931 | G→T | 12.1% | G426G (GGG→GGT) | rnr → | RNase R |
| RA | 4,422,887 | G→A | 7.5% | A14A (GCG→GCA) | ulaE → | L‑ribulose‑5‑phosphate 3‑epimerase UlaE |
| RA | 4,422,895 | C→G | 6.7% | A17G (GCC→GGC) | ulaE → | L‑ribulose‑5‑phosphate 3‑epimerase UlaE |
| RA | 4,422,903 | T→C | 5.2% | C20R (TGC→CGC) | ulaE → | L‑ribulose‑5‑phosphate 3‑epimerase UlaE |
| RA | 4,428,671 | T→C | 5.1% | H16R (CAC→CGC) | ytfB ← | cell division protein YtfB |
| RA | 4,444,191 | G→T | 6.1% | G27V (GGC→GTC) ‡ | tamB → | translocation and assembly module subunit TamB |
| RA | 4,444,192 | C→G | 6.9% | G27G (GGC→GGG) ‡ | tamB → | translocation and assembly module subunit TamB |
| RA | 4,444,193 | A→C | 6.1% | T28P (ACC→CCC) | tamB → | translocation and assembly module subunit TamB |
| RA | 4,447,964 | T→A | 8.3% | L24* (TTA→TAA) | ytfP → | gamma‑glutamylamine cyclotransferase family protein YtfP |
| RA | 4,454,799 | G→T | 7.3% | R271S (CGT→AGT) | fbp ← | fructose‑1,6‑bisphosphatase 1 |
| RA | 4,454,800 | C→G | 9.1% | L270L (CTG→CTC) ‡ | fbp ← | fructose‑1,6‑bisphosphatase 1 |
| RA | 4,454,801 | A→C | 7.4% | L270R (CTG→CGG) ‡ | fbp ← | fructose‑1,6‑bisphosphatase 1 |
| RA | 4,454,808 | C→T | 7.3% | G268S (GGC→AGC) | fbp ← | fructose‑1,6‑bisphosphatase 1 |
| RA | 4,469,455 | A→G | 5.7% | T611A (ACC→GCC) ‡ | mgtA → | Mg(2(+)) importing P‑type ATPase |
| RA | 4,469,456 | C→G | 5.9% | T611S (ACC→AGC) ‡ | mgtA → | Mg(2(+)) importing P‑type ATPase |
| RA | 4,469,457 | C→T | 5.9% | T611T (ACC→ACT) ‡ | mgtA → | Mg(2(+)) importing P‑type ATPase |
| RA | 4,501,227 | G→C | 5.3% | intergenic (‑436/‑33) | yjgX ← / → yjgZ | KpLE2 phage‑like element; putative phosphoethanolamine transferase YjgX, N‑terminal fragment/KpLE2 phage‑like element; uncharacterized protein YjgZ |
| RA | 4,501,905 | A→G | 5.1% | intergenic (+316/+198) | yjgZ → / ← insG | KpLE2 phage‑like element; uncharacterized protein YjgZ/KpLE2 phage‑like element; IS4 putative transposase |
| RA | 4,501,910 | A→T | 5.6% | intergenic (+321/+193) | yjgZ → / ← insG | KpLE2 phage‑like element; uncharacterized protein YjgZ/KpLE2 phage‑like element; IS4 putative transposase |
| RA | 4,510,335 | C→G | 5.3% | intergenic (+202/+355) | yjhV → / ← fecE | KpLE2 phage‑like element; putative uncharacterized protein YjhV/ferric citrate ABC transporter ATP binding subunit |
| RA | 4,510,336 | A→C | 5.3% | intergenic (+203/+354) | yjhV → / ← fecE | KpLE2 phage‑like element; putative uncharacterized protein YjhV/ferric citrate ABC transporter ATP binding subunit |
| RA | 4,519,311 | A→G | 7.8% | intergenic (+509/+27) | insA‑7 → / ← yjhU | KpLE2 phage‑like element; IS1 repressor protein InsA/KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU |
| RA | 4,519,313 | C→A | 8.6% | intergenic (+511/+25) | insA‑7 → / ← yjhU | KpLE2 phage‑like element; IS1 repressor protein InsA/KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU |
| RA | 4,519,314 | T→G | 7.5% | intergenic (+512/+24) | insA‑7 → / ← yjhU | KpLE2 phage‑like element; IS1 repressor protein InsA/KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU |
| RA | 4,519,316 | C→T | 7.6% | intergenic (+514/+22) | insA‑7 → / ← yjhU | KpLE2 phage‑like element; IS1 repressor protein InsA/KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU |
| RA | 4,520,500 | Δ1 bp | 9.8% | intergenic (‑176/+171) | yjhU ← / ← yjhF | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU/KpLE2 phage‑like element; putative transporter YjhF |
| RA | 4,520,504:1 | +T | 10.0% | intergenic (‑180/+167) | yjhU ← / ← yjhF | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhU/KpLE2 phage‑like element; putative transporter YjhF |
| RA | 4,521,370 | G→C | 9.6% | T217T (ACC→ACG) ‡ | yjhF ← | KpLE2 phage‑like element; putative transporter YjhF |
| RA | 4,521,372 | T→A | 8.6% | T217S (ACC→TCC) ‡ | yjhF ← | KpLE2 phage‑like element; putative transporter YjhF |
| RA | 4,521,374 | G→C | 8.4% | A216G (GCG→GGG) | yjhF ← | KpLE2 phage‑like element; putative transporter YjhF |
| RA | 4,551,422 | T→A | 6.1% | intergenic (‑126/‑214) | gntP ← / → uxuA | fructuronate transporter/D‑mannonate dehydratase |
| RA | 4,552,833 | T→C | 8.0% | intergenic (+13/‑68) | uxuA → / → uxuB | D‑mannonate dehydratase/D‑mannonate oxidoreductase |
| RA | 4,552,837 | Δ1 bp | 8.0% | intergenic (+17/‑64) | uxuA → / → uxuB | D‑mannonate dehydratase/D‑mannonate oxidoreductase |
| RA | 4,552,841:1 | +A | 8.0% | intergenic (+21/‑60) | uxuA → / → uxuB | D‑mannonate dehydratase/D‑mannonate oxidoreductase |
| RA | 4,552,845 | G→A | 7.9% | intergenic (+25/‑56) | uxuA → / → uxuB | D‑mannonate dehydratase/D‑mannonate oxidoreductase |
| RA | 4,554,516 | A→G | 6.6% | intergenic (+155/‑60) | uxuB → / → uxuR | D‑mannonate oxidoreductase/DNA‑binding transcriptional repressor UxuR |
| RA | 4,554,517 | A→C | 6.6% | intergenic (+156/‑59) | uxuB → / → uxuR | D‑mannonate oxidoreductase/DNA‑binding transcriptional repressor UxuR |
| RA | 4,554,523 | T→G | 7.1% | intergenic (+162/‑53) | uxuB → / → uxuR | D‑mannonate oxidoreductase/DNA‑binding transcriptional repressor UxuR |
| RA | 4,554,524 | C→A | 6.7% | intergenic (+163/‑52) | uxuB → / → uxuR | D‑mannonate oxidoreductase/DNA‑binding transcriptional repressor UxuR |
| RA | 4,554,530 | G→T | 7.1% | intergenic (+169/‑46) | uxuB → / → uxuR | D‑mannonate oxidoreductase/DNA‑binding transcriptional repressor UxuR |
| RA | 4,554,531 | C→T | 7.2% | intergenic (+170/‑45) | uxuB → / → uxuR | D‑mannonate oxidoreductase/DNA‑binding transcriptional repressor UxuR |
| RA | 4,562,702 | G→A | 7.3% | intergenic (‑27/+41) | yjiJ ← / ← yjiK | putative transporter YjiJ/uncharacterized protein YjiK |
| RA | 4,562,708 | A→T | 7.8% | intergenic (‑33/+35) | yjiJ ← / ← yjiK | putative transporter YjiJ/uncharacterized protein YjiK |
| RA | 4,562,709 | A→T | 6.9% | intergenic (‑34/+34) | yjiJ ← / ← yjiK | putative transporter YjiJ/uncharacterized protein YjiK |
| RA | 4,604,753 | T→A | 5.4% | S198R (AGT→AGA) | bglJ → | DNA‑binding transcriptional regulator BglJ |
| RA | 4,604,754 | T→A | 5.5% | S199T (TCT→ACT) | bglJ → | DNA‑binding transcriptional regulator BglJ |
| RA | 4,620,090 | C→T | 5.4% | T163I (ACC→ATC) | deoB → | phosphopentomutase |
| RA | 4,620,095 | A→T | 5.4% | K165* (AAG→TAG) ‡ | deoB → | phosphopentomutase |
| RA | 4,620,096 | A→T | 5.1% | K165M (AAG→ATG) ‡ | deoB → | phosphopentomutase |
| RA | 4,620,101 | A→G | 5.4% | I167V (ATT→GTT) | deoB → | phosphopentomutase |
| RA | 4,627,176 | A→C | 7.2% | H422P (CAC→CCC) | radA → | DNA recombination protein |
| RA | 4,627,179 | G→T | 6.8% | G423V (GGT→GTT) ‡ | radA → | DNA recombination protein |
| RA | 4,627,180 | T→G | 6.9% | G423G (GGT→GGG) ‡ | radA → | DNA recombination protein |
| RA | 4,639,554 | A→T | 7.8% | intergenic (+24/+36) | creD → / ← arcA | putative inner membrane protein/DNA‑binding transcriptional dual regulator ArcA |
| RA | 4,639,555 | A→T | 7.9% | intergenic (+25/+35) | creD → / ← arcA | putative inner membrane protein/DNA‑binding transcriptional dual regulator ArcA |
| RA | 4,639,556 | A→T | 7.9% | intergenic (+26/+34) | creD → / ← arcA | putative inner membrane protein/DNA‑binding transcriptional dual regulator ArcA |
| RA | 4,639,557 | A→T | 7.9% | intergenic (+27/+33) | creD → / ← arcA | putative inner membrane protein/DNA‑binding transcriptional dual regulator ArcA |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2066252–2066643 | 2066643 | 1–392 | 48 [45] | [46] 50 | [insH‑6] | [insH‑6] |
| * | * | ÷ | NC_000913 | 3423734–3424537 | 3424537 | 1–804 | 47 [45] | [46] 47 | [rrfD]–[rrlD] | [rrfD],[rrlD] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 64036 = | 78 (0.820) | 4 (0.040) | 4/262 | NT | 5.4% | coding (1745/2352 nt) | polB | DNA polymerase II |
| ? | NC_000913 | 64073 = | 65 (0.710) | coding (1708/2352 nt) | polB | DNA polymerase II | |||||
| * | ? | NC_000913 | = 105030 | 100 (1.050) | 5 (0.050) | 5/262 | NT | 5.0% | coding (1049/1263 nt) | ftsA | cell division protein FtsA |
| ? | NC_000913 | = 105062 | 94 (1.030) | coding (1081/1263 nt) | ftsA | cell division protein FtsA | |||||
| * | ? | NC_000913 | = 224065 | NA (NA) | 7 (0.080) | 5/260 | NT | NA | noncoding (295/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | NC_000913 | = 224074 | NA (NA) | noncoding (304/1542 nt) | rrsH | 16S ribosomal RNA | |||||
| * | ? | NC_000913 | 225078 = | NA (NA) | 27 (0.300) | 17/260 | NT | NA | noncoding (1308/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | NC_000913 | 225100 = | NA (NA) | noncoding (1330/1542 nt) | rrsH | 16S ribosomal RNA | |||||
| * | ? | NC_000913 | = 225997 | NA (NA) | 16 (0.170) | 12/264 | NT | NA | noncoding (239/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | NC_000913 | = 226015 | NA (NA) | noncoding (257/2904 nt) | rrlH | 23S ribosomal RNA | |||||
| * | ? | NC_000913 | = 226707 | 30 (0.320) | 5 (0.050) | 3/266 | NT | 14.7% | noncoding (949/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | NC_000913 | 2728218 = | NA (NA) | noncoding (967/2904 nt) | rrlG | 23S ribosomal RNA | |||||
| * | ? | NC_000913 | = 228553 | NA (NA) | 8 (0.090) | 6/264 | NT | NA | noncoding (2795/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | NC_000913 | = 228558 | NA (NA) | noncoding (2800/2904 nt) | rrlH | 23S ribosomal RNA | |||||
| * | ? | NC_000913 | = 228726 | 49 (0.520) | 7 (0.080) | 6/262 | NT | 13.2% | intergenic (+64/‑30) | rrlH/rrfH | 23S ribosomal RNA/5S ribosomal RNA |
| ? | NC_000913 | = 228738 | 45 (0.490) | intergenic (+76/‑18) | rrlH/rrfH | 23S ribosomal RNA/5S ribosomal RNA | |||||
| * | ? | NC_000913 | = 228744 | 50 (0.530) | 13 (0.140) | 9/262 | NT | 21.4% | intergenic (+82/‑12) | rrlH/rrfH | 23S ribosomal RNA/5S ribosomal RNA |
| ? | NC_000913 | 2726224 = | NA (NA) | intergenic (‑36/+57) | rrfG/rrlG | 5S ribosomal RNA/23S ribosomal RNA | |||||
| * | ? | NC_000913 | = 228744 | 50 (0.530) | 10 (0.110) | 7/262 | NT | 17.3% | intergenic (+82/‑12) | rrlH/rrfH | 23S ribosomal RNA/5S ribosomal RNA |
| ? | NC_000913 | = 4040481 | NA (NA) | intergenic (+58/‑36) | rrlA/rrfA | 23S ribosomal RNA/5S ribosomal RNA | |||||
| * | ? | NC_000913 | 242544 = | 80 (0.840) | 7 (0.080) | 7/262 | NT | 8.4% | coding (760/2445 nt) | fadE | acyl‑CoA dehydrogenase |
| ? | NC_000913 | 242578 = | 76 (0.840) | coding (726/2445 nt) | fadE | acyl‑CoA dehydrogenase | |||||
| * | ? | NC_000913 | 274347 = | NA (NA) | 6 (0.070) | 5/260 | NT | NA | noncoding (803/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274410 = | NA (NA) | noncoding (740/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274384 = | NA (NA) | 4 (0.040) | 3/268 | NT | NA | noncoding (766/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274422 = | NA (NA) | noncoding (728/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274620 = | NA (NA) | 4 (0.050) | 3/256 | NT | NA | noncoding (530/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274663 = | NA (NA) | noncoding (487/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 288405 = | 82 (0.860) | 5 (0.060) | 3/256 | NT | 6.0% | coding (758/759 nt) | xynR | CP4‑6 prophage; DNA‑binding transcriptional repressor XynR |
| ? | NC_000913 | 288449 = | 79 (0.890) | coding (714/759 nt) | xynR | CP4‑6 prophage; DNA‑binding transcriptional repressor XynR | |||||
| * | ? | NC_000913 | 315563 = | NA (NA) | 4 (0.050) | 3/254 | NT | NA | noncoding (335/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 315599 = | NA (NA) | noncoding (371/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | 337292 = | 66 (0.690) | 4 (0.040) | 4/258 | NT | 6.5% | coding (515/1548 nt) | yahF | putative acyl‑CoA synthetase YahF |
| ? | NC_000913 | 337340 = | 53 (0.590) | coding (563/1548 nt) | yahF | putative acyl‑CoA synthetase YahF | |||||
| * | ? | NC_000913 | 354606 = | NA (NA) | 3 (0.030) | 3/260 | NT | NA | noncoding (7/28 nt) | other | REPt26a |
| ? | NC_000913 | 354654 = | NA (NA) | noncoding (14/36 nt) | other | REP26b | |||||
| * | ? | NC_000913 | 370078 = | 85 (0.890) | 5 (0.050) | 5/262 | NT | 6.3% | coding (1468/1665 nt) | mhpA | putative 3‑(3‑hydroxyphenyl)propanoate/3‑hydroxycinnamate hydroxylase |
| ? | NC_000913 | 370113 = | 67 (0.740) | coding (1503/1665 nt) | mhpA | putative 3‑(3‑hydroxyphenyl)propanoate/3‑hydroxycinnamate hydroxylase | |||||
| * | ? | NC_000913 | 381663 = | NA (NA) | 10 (0.110) | 10/260 | NT | NA | noncoding (404/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 381703 = | NA (NA) | noncoding (444/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 381669 | NA (NA) | 17 (0.190) | 11/260 | NT | NA | noncoding (410/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 381695 | NA (NA) | noncoding (436/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 385205 | 146 (1.540) | 19 (0.210) | 13/258 | NT | 12.3% | intergenic (‑589/‑27) | yaiS/tauA | putative deacetylase YaiS/taurine ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 385217 | 134 (1.500) | intergenic (‑601/‑15) | yaiS/tauA | putative deacetylase YaiS/taurine ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 445287 | NA (NA) | 3 (0.030) | 3/252 | NT | NA | noncoding (1/29 nt) | other | REPv40b |
| ? | NC_000913 | = 445316 | NA (NA) | coding (1351/1365 nt) | yajR | putative major facilitator superfamily transport protein YajR | |||||
| * | ? | NC_000913 | 473497 = | 71 (0.750) | 6 (0.070) | 4/258 | NT | 8.2% | coding (532/1287 nt) | amtB | ammonia/ammonium transporter |
| ? | NC_000913 | 473530 = | 68 (0.760) | coding (565/1287 nt) | amtB | ammonia/ammonium transporter | |||||
| * | ? | NC_000913 | 580753 = | 93 (0.980) | 5 (0.060) | 5/242 | NT | 5.9% | intergenic (‑308/‑81) | ylcI/nohD | DLP12 prophage; DUF3950 domain‑containing protein YlcI/DLP12 prophage; putative DNA‑packaging protein NohD |
| ? | NC_000913 | 580810 = | 78 (0.930) | intergenic (‑365/‑24) | ylcI/nohD | DLP12 prophage; DUF3950 domain‑containing protein YlcI/DLP12 prophage; putative DNA‑packaging protein NohD | |||||
| * | ? | NC_000913 | 618054 = | 128 (1.350) | 10 (0.120) | 9/248 | NT | 7.9% | intergenic (+16/‑200) | entF/fepE | apo‑serine activating enzyme/polysaccharide co‑polymerase family protein FepE |
| ? | NC_000913 | 618087 = | 118 (1.370) | intergenic (+49/‑167) | entF/fepE | apo‑serine activating enzyme/polysaccharide co‑polymerase family protein FepE | |||||
| * | ? | NC_000913 | 632676 = | 83 (0.870) | 5 (0.060) | 5/258 | NT | 6.2% | coding (802/1089 nt) | hcxA | hydroxycarboxylate dehydrogenase A |
| ? | NC_000913 | 632719 = | 72 (0.800) | coding (759/1089 nt) | hcxA | hydroxycarboxylate dehydrogenase A | |||||
| * | ? | NC_000913 | 675534 = | 96 (1.010) | 5 (0.050) | 5/262 | NT | 5.2% | intergenic (+34/+36) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 675558 = | 90 (0.990) | intergenic (+58/+12) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ | |||||
| * | ? | NC_000913 | 880868 = | 89 (0.940) | 5 (0.050) | 5/262 | NT | 5.6% | coding (142/1203 nt) | dacC | D‑alanyl‑D‑alanine carboxypeptidase DacC |
| ? | NC_000913 | 880888 = | 83 (0.910) | coding (162/1203 nt) | dacC | D‑alanyl‑D‑alanine carboxypeptidase DacC | |||||
| * | ? | NC_000913 | = 903294 | 72 (0.760) | 5 (0.050) | 5/262 | NT | 6.8% | coding (441/729 nt) | artP | L‑arginine ABC transporter ATP binding subunit |
| ? | NC_000913 | = 903313 | 68 (0.750) | coding (422/729 nt) | artP | L‑arginine ABC transporter ATP binding subunit | |||||
| * | ? | NC_000913 | = 909410 | 77 (0.810) | 8 (0.090) | 7/262 | NT | 9.4% | coding (1640/1719 nt) | poxB | pyruvate oxidase |
| ? | NC_000913 | = 909421 | 80 (0.880) | coding (1629/1719 nt) | poxB | pyruvate oxidase | |||||
| * | ? | NC_000913 | = 916202 | 90 (0.950) | 6 (0.070) | 6/260 | NT | 6.4% | intergenic (‑155/‑271) | aqpZ/ybjD | water channel AqpZ/DUF2813 domain‑containing protein YbjD |
| ? | NC_000913 | = 916207 | 89 (0.990) | intergenic (‑160/‑266) | aqpZ/ybjD | water channel AqpZ/DUF2813 domain‑containing protein YbjD | |||||
| * | ? | NC_000913 | = 947041 | 70 (0.740) | 10 (0.120) | 8/246 | NT | 12.8% | intergenic (+22/‑188) | ycaD/ycaM | putative transporter YcaD/putative transporter YcaM |
| ? | NC_000913 | = 947049 | 73 (0.860) | intergenic (+30/‑180) | ycaD/ycaM | putative transporter YcaD/putative transporter YcaM | |||||
| * | ? | NC_000913 | 998439 = | 106 (1.110) | 12 (0.140) | 9/256 | NT | 10.8% | intergenic (+32/‑51) | elfA/elfD | putative laminin‑binding fimbrial subunit/putative fimbrial chaperone ElfD |
| ? | NC_000913 | 998461 = | 99 (1.110) | intergenic (+54/‑29) | elfA/elfD | putative laminin‑binding fimbrial subunit/putative fimbrial chaperone ElfD | |||||
| * | ? | NC_000913 | = 998447 | 103 (1.080) | 8 (0.090) | 8/256 | NT | 7.6% | intergenic (+40/‑43) | elfA/elfD | putative laminin‑binding fimbrial subunit/putative fimbrial chaperone ElfD |
| ? | NC_000913 | = 998451 | 99 (1.110) | intergenic (+44/‑39) | elfA/elfD | putative laminin‑binding fimbrial subunit/putative fimbrial chaperone ElfD | |||||
| * | ? | NC_000913 | = 1009602 | 89 (0.940) | 5 (0.060) | 5/260 | NT | 5.8% | coding (1759/2109 nt) | rlmL | fused 23S rRNA m(2)G2445 methyltransferase and 23S rRNA m(7)G2069 methyltransferase |
| ? | NC_000913 | = 1009624 | 79 (0.880) | coding (1781/2109 nt) | rlmL | fused 23S rRNA m(2)G2445 methyltransferase and 23S rRNA m(7)G2069 methyltransferase | |||||
| * | ? | NC_000913 | 1022126 = | 86 (0.900) | 5 (0.050) | 4/266 | NT | 5.9% | coding (1758/2154 nt) | yccS | putative transporter YccS |
| ? | NC_000913 | 1022162 = | 76 (0.820) | coding (1722/2154 nt) | yccS | putative transporter YccS | |||||
| * | ? | NC_000913 | = 1024676 | 89 (0.940) | 5 (0.060) | 5/260 | NT | 5.4% | coding (206/2055 nt) | helD | DNA helicase IV |
| ? | NC_000913 | = 1024696 | 91 (1.010) | coding (226/2055 nt) | helD | DNA helicase IV | |||||
| * | ? | NC_000913 | = 1069024 | 87 (0.910) | 5 (0.060) | 5/260 | NT | 5.7% | coding (816/1329 nt) | rutG | pyrimidine:H(+) symporter |
| ? | NC_000913 | = 1069040 | 83 (0.920) | coding (800/1329 nt) | rutG | pyrimidine:H(+) symporter | |||||
| * | ? | NC_000913 | = 1074671 | 91 (0.960) | 6 (0.070) | 6/256 | NT | 6.2% | coding (430/639 nt) | rutR | DNA‑binding transcriptional dual regulator RutR |
| ? | NC_000913 | = 1074703 | 98 (1.100) | coding (462/639 nt) | rutR | DNA‑binding transcriptional dual regulator RutR | |||||
| * | ? | NC_000913 | = 1084726 | NA (NA) | 3 (0.030) | 3/258 | NT | NA | intergenic (+79/‑266) | efeB/phoH | heme‑containing peroxidase/deferrochelatase/ATP‑binding protein PhoH |
| ? | NC_000913 | = 1084773 | NA (NA) | intergenic (+126/‑219) | efeB/phoH | heme‑containing peroxidase/deferrochelatase/ATP‑binding protein PhoH | |||||
| * | ? | NC_000913 | = 1086080 | 100 (1.050) | 11 (0.120) | 8/260 | NT | 10.0% | intergenic (+24/+26) | phoH/pgaD | ATP‑binding protein PhoH/poly‑N‑acetyl‑D‑glucosamine synthase subunit PgaD |
| ? | NC_000913 | = 1086085 | 103 (1.140) | intergenic (+29/+21) | phoH/pgaD | ATP‑binding protein PhoH/poly‑N‑acetyl‑D‑glucosamine synthase subunit PgaD | |||||
| * | ? | NC_000913 | 1200516 = | 90 (0.950) | 6 (0.060) | 4/266 | NT | 6.8% | coding (291/1128 nt) | intE | e14 prophage; putative integrase |
| ? | NC_000913 | 1200556 = | 77 (0.830) | coding (251/1128 nt) | intE | e14 prophage; putative integrase | |||||
| * | ? | NC_000913 | = 1202235 | 100 (1.050) | 10 (0.110) | 7/260 | NT | 9.4% | intergenic (‑151/+24) | ymfJ/ymfK | e14 prophage; protein YmfJ/e14 prophage; putative repressor protein YmfK |
| ? | NC_000913 | = 1202239 | 98 (1.090) | intergenic (‑155/+20) | ymfJ/ymfK | e14 prophage; protein YmfJ/e14 prophage; putative repressor protein YmfK | |||||
| * | ? | NC_000913 | 1205157 = | 74 (0.780) | 6 (0.070) | 5/262 | NT | 7.8% | coding (988/1368 nt) pseudogene (757/1137 nt) |
ymfN aaaE |
e14 prophage; chimeric replication protein/phage terminase YmfN phage terminase |
| ? | NC_000913 | 1205226 = | 72 (0.790) | coding (1057/1368 nt) pseudogene (826/1137 nt) |
ymfN aaaE |
e14 prophage; chimeric replication protein/phage terminase YmfN phage terminase |
|||||
| * | ? | NC_000913 | 1207790 = | 5 (0.050) | 72 (0.860) | 52/242 | NT | 89.8% | coding (290/630 nt) | ycfK | e14 prophage; protein StfP |
| ? | NC_000913 | 1209619 = | 12 (0.140) | pseudogene (37/537 nt) | stfE | e14 prophage; putative side tail fiber protein fragment | |||||
| * | ? | NC_000913 | = 1207805 | 5 (0.050) | 79 (0.940) | 66/242 | NT | 90.6% | coding (305/630 nt) | ycfK | e14 prophage; protein StfP |
| ? | NC_000913 | = 1209602 | 12 (0.140) | pseudogene (54/537 nt) | stfE | e14 prophage; putative side tail fiber protein fragment | |||||
| * | ? | NC_000913 | 1231441 = | 107 (1.130) | 7 (0.080) | 6/260 | NT | 6.9% | coding (256/1269 nt) | umuC | DNA polymerase V catalytic protein |
| ? | NC_000913 | 1231473 = | 88 (0.980) | coding (288/1269 nt) | umuC | DNA polymerase V catalytic protein | |||||
| * | ? | NC_000913 | 1247277 = | 61 (0.640) | 6 (0.070) | 6/260 | NT | 9.2% | coding (100/1698 nt) | treA | periplasmic trehalase |
| ? | NC_000913 | 1247315 = | 60 (0.660) | coding (62/1698 nt) | treA | periplasmic trehalase | |||||
| * | ? | NC_000913 | 1264716 = | 82 (0.860) | 4 (0.050) | 4/256 | NT | 5.2% | coding (1003/1257 nt) | hemA | glutamyl‑tRNA reductase |
| ? | NC_000913 | 1264766 = | 69 (0.780) | coding (1053/1257 nt) | hemA | glutamyl‑tRNA reductase | |||||
| * | ? | NC_000913 | 1286594 = | NA (NA) | 11 (0.120) | 8/260 | NT | NA | intergenic (+68/‑115) | narI/ychS | nitrate reductase A subunit gamma/putative uncharacterized protein YchS |
| ? | NC_000913 | 1286619 = | NA (NA) | noncoding (25/29 nt) | other | REPv108a | |||||
| * | ? | NC_000913 | = 1299498 | 0 (0.000) | 124 (1.340) | 80/266 | NT | 100% | intergenic (+253/‑33) | ychE/insH21 | putative inner membrane protein/IS5 transposase and trans‑activator |
| ? | NC_000913 | 1300698 = | 0 (0.000) | intergenic (+151/‑484) | insH21/oppA | IS5 transposase and trans‑activator/oligopeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 1343176 | 84 (0.880) | 9 (0.100) | 7/262 | NT | 9.7% | coding (153/219 nt) | osmB | osmotically‑inducible lipoprotein OsmB |
| ? | NC_000913 | = 1343184 | 87 (0.960) | coding (145/219 nt) | osmB | osmotically‑inducible lipoprotein OsmB | |||||
| * | ? | NC_000913 | 1437192 = | 140 (1.470) | 8 (0.090) | 8/262 | NT | 6.0% | noncoding (72/109 nt) | micC | small regulatory RNA MicC |
| ? | NC_000913 | 1437233 = | 117 (1.290) | intergenic (+4/+27) | micC/ydbK | small regulatory RNA MicC/putative pyruvate‑flavodoxin oxidoreductase | |||||
| * | ? | NC_000913 | 1444785 = | 63 (0.660) | 6 (0.070) | 6/262 | NT | 9.7% | coding (1735/2640 nt) | ydbH | PF11739 family protein YdbH |
| ? | NC_000913 | 1444814 = | 51 (0.560) | coding (1764/2640 nt) | ydbH | PF11739 family protein YdbH | |||||
| * | ? | NC_000913 | 1606648 = | 84 (0.880) | 5 (0.050) | 4/262 | NT | 5.8% | coding (549/876 nt) | lsrF | 3‑hydroxy‑2,4‑pentadione 5‑phosphate thiolase |
| ? | NC_000913 | 1606687 = | 82 (0.900) | coding (588/876 nt) | lsrF | 3‑hydroxy‑2,4‑pentadione 5‑phosphate thiolase | |||||
| * | ? | NC_000913 | = 1684451 | 92 (0.970) | 8 (0.090) | 5/262 | NT | 8.0% | coding (193/930 nt) | tus | DNA replication terminus site‑binding protein |
| ? | NC_000913 | = 1684466 | 96 (1.060) | coding (208/930 nt) | tus | DNA replication terminus site‑binding protein | |||||
| * | ? | NC_000913 | = 1685678 | 67 (0.700) | 6 (0.070) | 5/264 | NT | 8.8% | coding (911/1404 nt) | fumC | fumarase C |
| ? | NC_000913 | = 1685700 | 60 (0.650) | coding (889/1404 nt) | fumC | fumarase C | |||||
| * | ? | NC_000913 | = 1697644 | 84 (0.880) | 7 (0.080) | 7/254 | NT | 7.9% | coding (397/768 nt) | hdhA | 7‑alpha‑hydroxysteroid dehydrogenase |
| ? | NC_000913 | = 1697668 | 86 (0.980) | coding (373/768 nt) | hdhA | 7‑alpha‑hydroxysteroid dehydrogenase | |||||
| * | ? | NC_000913 | 1708272 = | 95 (1.000) | 6 (0.070) | 6/264 | NT | 6.1% | coding (1354/2223 nt) | rsxC | SoxR [2Fe‑2S] reducing system protein RsxC |
| ? | NC_000913 | 1708327 = | 93 (1.020) | coding (1409/2223 nt) | rsxC | SoxR [2Fe‑2S] reducing system protein RsxC | |||||
| * | ? | NC_000913 | = 1799166 | 114 (1.200) | 6 (0.070) | 5/256 | NT | 5.3% | intergenic (‑224/+60) | pheS/pheM | phenylalanine‑‑tRNA ligase subunit alpha/pheST‑ihfA operon leader peptide |
| ? | NC_000913 | = 1799170 | 109 (1.230) | intergenic (‑228/+56) | pheS/pheM | phenylalanine‑‑tRNA ligase subunit alpha/pheST‑ihfA operon leader peptide | |||||
| * | ? | NC_000913 | 1821865 = | 104 (1.090) | 8 (0.090) | 6/258 | NT | 7.8% | intergenic (‑246/+53) | chbB/osmE | N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE |
| ? | NC_000913 | 1821887 = | 90 (1.010) | intergenic (‑268/+31) | chbB/osmE | N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE | |||||
| * | ? | NC_000913 | = 1859585 | 96 (1.010) | 5 (0.060) | 5/260 | NT | 5.1% | coding (645/1380 nt) | ydjK | putative transporter YdjK |
| ? | NC_000913 | = 1859618 | 94 (1.040) | coding (612/1380 nt) | ydjK | putative transporter YdjK | |||||
| * | ? | NC_000913 | = 1953511 | 89 (0.940) | 5 (0.050) | 4/264 | NT | 5.5% | coding (70/972 nt) | cmoB | tRNA U34 carboxymethyltransferase |
| ? | NC_000913 | = 1953539 | 87 (0.950) | coding (98/972 nt) | cmoB | tRNA U34 carboxymethyltransferase | |||||
| * | ? | NC_000913 | = 2231075 | 87 (0.910) | 6 (0.070) | 6/260 | NT | 6.4% | coding (57/696 nt) | yohK | PF04712 family membrane protein YohK |
| ? | NC_000913 | = 2231083 | 92 (1.020) | coding (65/696 nt) | yohK | PF04712 family membrane protein YohK | |||||
| * | ? | NC_000913 | 2268409 = | 99 (1.040) | 5 (0.050) | 5/266 | NT | 5.0% | coding (581/987 nt) | yeiR | zinc‑binding GTPase YeiR |
| ? | NC_000913 | 2268447 = | 93 (1.010) | coding (619/987 nt) | yeiR | zinc‑binding GTPase YeiR | |||||
| * | ? | NC_000913 | 2278525 = | 90 (0.950) | 7 (0.080) | 6/266 | NT | 7.8% | intergenic (‑288/+45) | yejG/bcr | protein YejG/multidrug efflux pump Bcr |
| ? | NC_000913 | 2278565 = | 78 (0.840) | intergenic (‑328/+5) | yejG/bcr | protein YejG/multidrug efflux pump Bcr | |||||
| * | ? | NC_000913 | = 2363709 | 80 (0.840) | 8 (0.090) | 8/262 | NT | 9.2% | intergenic (‑76/+24) | yfaY/yfaZ | IPR008135 CinA family protein YfaY/putative porin YfaZ |
| ? | NC_000913 | = 2363718 | 81 (0.890) | intergenic (‑85/+15) | yfaY/yfaZ | IPR008135 CinA family protein YfaY/putative porin YfaZ | |||||
| * | ? | NC_000913 | = 2456279 | 97 (1.020) | 5 (0.060) | 4/258 | NT | 5.2% | intergenic (‑633/+48) | yfcV/sixA | putative fimbrial protein YfcV/phosphohistidine phosphatase |
| ? | NC_000913 | = 2456322 | 90 (1.010) | intergenic (‑676/+5) | yfcV/sixA | putative fimbrial protein YfcV/phosphohistidine phosphatase | |||||
| * | ? | NC_000913 | 2501197 = | 83 (0.870) | 7 (0.080) | 7/268 | NT | 8.6% | coding (68/858 nt) | ypdC | putative AraC‑type DNA‑binding transcriptional regulator YpdC |
| ? | NC_000913 | 2501252 = | 67 (0.720) | coding (123/858 nt) | ypdC | putative AraC‑type DNA‑binding transcriptional regulator YpdC | |||||
| * | ? | NC_000913 | = 2549565 | NA (NA) | 4 (0.060) +37 bp |
4/200 | NT | NA | intergenic (+159/+81) | yfeW/yfeX | penicillin binding protein 4B/porphyrinogen peroxidase |
| ? | NC_000913 | 3012526 = | NA (NA) | intergenic (+133/+88) | yqeA/yqeB | putative amino acid kinase YqeA/XdhC‑CoxI family protein YqeB | |||||
| * | ? | NC_000913 | = 2553451 | 85 (0.890) | 5 (0.050) | 5/268 | NT | 5.7% | coding (227/900 nt) | hemF | coproporphyrinogen III oxidase |
| ? | NC_000913 | = 2553492 | 82 (0.880) | coding (268/900 nt) | hemF | coproporphyrinogen III oxidase | |||||
| * | ? | NC_000913 | 2586485 = | 88 (0.930) | 5 (0.060) | 5/260 | NT | 5.8% | coding (755/1701 nt) | narQ | sensory histidine kinase NarQ |
| ? | NC_000913 | 2586508 = | 79 (0.880) | coding (778/1701 nt) | narQ | sensory histidine kinase NarQ | |||||
| * | ? | NC_000913 | 2595619 = | 78 (0.820) | 4 (0.040) | 4/264 | NT | 5.4% | coding (241/2016 nt) | tmcA | tRNA(Met) cytidine acetyltransferase |
| ? | NC_000913 | 2595653 = | 64 (0.700) | coding (207/2016 nt) | tmcA | tRNA(Met) cytidine acetyltransferase | |||||
| * | ? | NC_000913 | = 2691723 | 83 (0.870) | 5 (0.060) | 5/258 | NT | 5.9% | coding (3821/3888 nt) | purL | phosphoribosylformylglycinamide synthetase |
| ? | NC_000913 | = 2691746 | 81 (0.900) | coding (3798/3888 nt) | purL | phosphoribosylformylglycinamide synthetase | |||||
| * | ? | NC_000913 | = 2697404 | 76 (0.800) | 6 (0.070) | 4/262 | NT | 7.7% | coding (454/504 nt) | tadA | tRNA adenosine(34) deaminase |
| ? | NC_000913 | = 2697428 | 71 (0.780) | coding (430/504 nt) | tadA | tRNA adenosine(34) deaminase | |||||
| * | ? | NC_000913 | 2703241 = | 67 (0.700) | 5 (0.050) | 5/268 | NT | 6.8% | coding (146/906 nt) | era | 30S ribosomal subunit maturation GTPase Era |
| ? | NC_000913 | 2703278 = | 71 (0.760) | coding (109/906 nt) | era | 30S ribosomal subunit maturation GTPase Era | |||||
| * | ? | NC_000913 | 2703806 = | 78 (0.820) | 6 (0.070) | 6/258 | NT | 7.4% | coding (258/681 nt) | rnc | RNase III |
| ? | NC_000913 | 2703852 = | 77 (0.860) | coding (212/681 nt) | rnc | RNase III | |||||
| * | ? | NC_000913 | 2708665 = | 83 (0.870) | 4 (0.040) | 4/260 | NT | 5.1% | coding (90/957 nt) | rseB | anti‑sigma factor stabilizing protein RseB |
| ? | NC_000913 | 2708699 = | 70 (0.780) | coding (56/957 nt) | rseB | anti‑sigma factor stabilizing protein RseB | |||||
| * | ? | NC_000913 | 2718418 = | 86 (0.900) | 6 (0.070) | 6/264 | NT | 6.7% | coding (111/1038 nt) | yfiF | putative methyltransferase |
| ? | NC_000913 | 2718443 = | 85 (0.930) | coding (86/1038 nt) | yfiF | putative methyltransferase | |||||
| * | ? | NC_000913 | 2728214 = | NA (NA) | 10 (0.110) | 6/266 | NT | NA | noncoding (971/2904 nt) | rrlG | 23S ribosomal RNA |
| ? | NC_000913 | 2728240 = | NA (NA) | noncoding (945/2904 nt) | rrlG | 23S ribosomal RNA | |||||
| * | ? | NC_000913 | = 2729452 | 54 (0.570) | 7 (0.080) | 7/254 | NT | 9.3% | intergenic (‑8/+164) | gltW/rrsG | tRNA‑Glu/16S ribosomal RNA |
| ? | NC_000913 | 4168342 = | 87 (0.990) | intergenic (+142/‑30) | rrsB/gltT | 16S ribosomal RNA/tRNA‑Glu | |||||
| * | ? | NC_000913 | 2729475 = | 55 (0.580) | 8 (0.090) | 8/254 | NT | 11.6% | intergenic (‑31/+141) | gltW/rrsG | tRNA‑Glu/16S ribosomal RNA |
| ? | NC_000913 | = 4168363 | 71 (0.810) | intergenic (+163/‑9) | rrsB/gltT | 16S ribosomal RNA/tRNA‑Glu | |||||
| * | ? | NC_000913 | = 2730286 | NA (NA) | 3 (0.030) | 3/258 | NT | NA | noncoding (872/1542 nt) | rrsG | 16S ribosomal RNA |
| ? | NC_000913 | = 2730329 | NA (NA) | noncoding (829/1542 nt) | rrsG | 16S ribosomal RNA | |||||
| * | ? | NC_000913 | = 2730312 | NA (NA) | 6 (0.070) | 5/260 | NT | NA | noncoding (846/1542 nt) | rrsG | 16S ribosomal RNA |
| ? | NC_000913 | = 2730346 | NA (NA) | noncoding (812/1542 nt) | rrsG | 16S ribosomal RNA | |||||
| * | ? | NC_000913 | 2730863 = | 38 (0.400) | 3 (0.030) | 3/260 | NT | 7.8% | noncoding (295/1542 nt) | rrsG | 16S ribosomal RNA |
| ? | NC_000913 | 3428459 = | 35 (0.390) | noncoding (304/1542 nt) | rrsD | 16S ribosomal RNA | |||||
| * | ? | NC_000913 | = 2779740 | 81 (0.850) | 4 (0.040) | 4/262 | NT | 5.0% | coding (2987/4581 nt) | ypjA | adhesin‑like autotransporter YpjA |
| ? | NC_000913 | = 2779764 | 74 (0.810) | coding (2963/4581 nt) | ypjA | adhesin‑like autotransporter YpjA | |||||
| * | ? | NC_000913 | 2805389 = | 71 (0.750) | 5 (0.050) | 4/262 | NT | 6.7% | coding (575/1203 nt) | proV | glycine betaine ABC transporter ATP binding subunit ProV |
| ? | NC_000913 | 2805422 = | 72 (0.790) | coding (608/1203 nt) | proV | glycine betaine ABC transporter ATP binding subunit ProV | |||||
| * | ? | NC_000913 | = 2805904 | 69 (0.730) | 5 (0.050) | 5/266 | NT | 6.7% | coding (1090/1203 nt) | proV | glycine betaine ABC transporter ATP binding subunit ProV |
| ? | NC_000913 | = 2805932 | 73 (0.790) | coding (1118/1203 nt) | proV | glycine betaine ABC transporter ATP binding subunit ProV | |||||
| * | ? | NC_000913 | = 2845717 | 64 (0.670) | 4 (0.040) | 4/266 | NT | 5.8% | coding (755/1710 nt) | hycE | formate hydrogenlyase subunit HycE |
| ? | NC_000913 | = 2845752 | 67 (0.730) | coding (720/1710 nt) | hycE | formate hydrogenlyase subunit HycE | |||||
| * | ? | NC_000913 | 2865050 = | 97 (1.020) | 8 (0.090) | 7/260 | NT | 8.0% | intergenic (+38/‑51) | ygbM/ygbN | putative 2‑oxo‑tetronate isomerase YgbM/putative transporter YgbN |
| ? | NC_000913 | 2865068 = | 91 (1.010) | intergenic (+56/‑33) | ygbM/ygbN | putative 2‑oxo‑tetronate isomerase YgbM/putative transporter YgbN | |||||
| * | ? | NC_000913 | 2907447 = | 110 (1.160) | 5 (0.060) | 5/260 | NT | 5.1% | coding (495/1299 nt) | eno | enolase |
| ? | NC_000913 | 2907483 = | 83 (0.920) | coding (459/1299 nt) | eno | enolase | |||||
| * | ? | NC_000913 | = 2909117 | 93 (0.980) | 5 (0.050) | 5/266 | NT | 5.2% | coding (550/1638 nt) | pyrG | CTP synthetase |
| ? | NC_000913 | = 2909146 | 92 (1.000) | coding (521/1638 nt) | pyrG | CTP synthetase | |||||
| * | ? | NC_000913 | 2950598 = | NA (NA) | 7 (0.080) | 7/254 | NT | NA | intergenic (+25/+37) | argA/recD | N‑acetylglutamate synthase/exodeoxyribonuclease V subunit RecD |
| ? | NC_000913 | 2950615 = | NA (NA) | noncoding (13/14 nt) | other | REP207 | |||||
| * | ? | NC_000913 | = 2953622 | 88 (0.930) | 7 (0.080) | 5/260 | NT | 7.7% | coding (2382/3543 nt) | recB | exodeoxyribonuclease V subunit RecB |
| ? | NC_000913 | = 2953649 | 85 (0.940) | coding (2355/3543 nt) | recB | exodeoxyribonuclease V subunit RecB | |||||
| * | ? | NC_000913 | = 3016167 | 62 (0.650) | 5 (0.060) | 5/252 | NT | 8.0% | coding (108/3099 nt) | ygfK | putative oxidoreductase, Fe‑S subunit |
| ? | NC_000913 | = 3016180 | 58 (0.660) | coding (121/3099 nt) | ygfK | putative oxidoreductase, Fe‑S subunit | |||||
| * | ? | NC_000913 | 3048173 = | 84 (0.880) | 5 (0.050) | 5/266 | NT | 5.9% | coding (869/2874 nt) | gcvP | glycine decarboxylase |
| ? | NC_000913 | 3048239 = | 77 (0.830) | coding (803/2874 nt) | gcvP | glycine decarboxylase | |||||
| * | ? | NC_000913 | 3128352 = | 101 (1.060) | 6 (0.070) | 5/256 | NT | 6.0% | coding (81/765 nt) | glcC | DNA‑binding transcriptional dual regulator GlcC |
| ? | NC_000913 | 3128432 = | 95 (1.070) | coding (161/765 nt) | glcC | DNA‑binding transcriptional dual regulator GlcC | |||||
| * | ? | NC_000913 | 3150551 = | NA (NA) | 5 (0.070) +33 bp |
4/208 | NT | NA | intergenic (+5/+267) | yghA/exbD | NADP(+)‑dependent aldehyde reductase/Ton complex subunit ExbD |
| ? | NC_000913 | 3150725 = | NA (NA) | noncoding (15/34 nt) | other | REP222d | |||||
| * | ? | NC_000913 | 3228463 = | 80 (0.840) | 4 (0.040) | 4/260 | NT | 5.2% | coding (663/1071 nt) | ygjJ | protein YgjJ |
| ? | NC_000913 | 3228500 = | 69 (0.760) | coding (700/1071 nt) | ygjJ | protein YgjJ | |||||
| * | ? | NC_000913 | 3291101 = | 91 (0.960) | 5 (0.060) | 5/258 | NT | 5.6% | coding (2288/2517 nt) | yraJ | putative fimbrial usher protein YraJ |
| ? | NC_000913 | 3291119 = | 82 (0.920) | coding (2306/2517 nt) | yraJ | putative fimbrial usher protein YraJ | |||||
| * | ? | NC_000913 | = 3295106 | 64 (0.670) | 5 (0.050) | 5/262 | NT | 6.9% | coding (1707/2037 nt) | lpoA | outer membrane lipoprotein ‑ activator of MrcA activity |
| ? | NC_000913 | = 3295127 | 73 (0.800) | coding (1728/2037 nt) | lpoA | outer membrane lipoprotein ‑ activator of MrcA activity | |||||
| * | ? | NC_000913 | = 3304484 | NA (NA) | 5 (0.060) | 5/252 | NT | NA | intergenic (+29/+89) | yhbW/mtr | putative luciferase‑like monooxygenase/tryptophan:H(+) symporter Mtr |
| ? | NC_000913 | = 3304553 | NA (NA) | intergenic (+98/+20) | yhbW/mtr | putative luciferase‑like monooxygenase/tryptophan:H(+) symporter Mtr | |||||
| * | ? | NC_000913 | = 3427065 | NA (NA) | 8 (0.090) | 7/256 | NT | NA | intergenic (‑32/+11) | alaU/ileU | tRNA‑Ala/tRNA‑Ile |
| ? | NC_000913 | = 3427068 | NA (NA) | intergenic (‑35/+8) | alaU/ileU | tRNA‑Ala/tRNA‑Ile | |||||
| * | ? | NC_000913 | 3473464 = | 95 (1.000) | 7 (0.080) | 5/264 | NT | 7.2% | coding (51/2115 nt) | fusA | elongation factor G |
| ? | NC_000913 | 3473495 = | 88 (0.960) | coding (20/2115 nt) | fusA | elongation factor G | |||||
| * | ? | NC_000913 | 3535566 = | 98 (1.030) | 5 (0.050) | 4/262 | NT | 5.2% | coding (303/1353 nt) | envZ | sensory histidine kinase EnvZ |
| ? | NC_000913 | 3535601 = | 89 (0.980) | coding (268/1353 nt) | envZ | sensory histidine kinase EnvZ | |||||
| * | ? | NC_000913 | 3556422 = | 96 (1.010) | 5 (0.050) | 5/268 | NT | 5.4% | coding (428/1017 nt) | rtcA | RNA 3'‑terminal phosphate cyclase |
| ? | NC_000913 | 3556490 = | 83 (0.890) | coding (360/1017 nt) | rtcA | RNA 3'‑terminal phosphate cyclase | |||||
| * | ? | NC_000913 | = 3556567 | 81 (0.850) | 5 (0.060) | 5/258 | NT | 5.9% | coding (283/1017 nt) | rtcA | RNA 3'‑terminal phosphate cyclase |
| ? | NC_000913 | = 3556611 | 82 (0.920) | coding (239/1017 nt) | rtcA | RNA 3'‑terminal phosphate cyclase | |||||
| * | ? | NC_000913 | = 3571207 | 79 (0.830) | 6 (0.070) | 6/258 | NT | 7.5% | coding (113/1974 nt) | glgX | limit dextrin alpha‑1,6‑glucohydrolase |
| ? | NC_000913 | = 3571254 | 74 (0.830) | coding (66/1974 nt) | glgX | limit dextrin alpha‑1,6‑glucohydrolase | |||||
| * | ? | NC_000913 | = 3574921 | 78 (0.820) | 9 (0.100) | 8/260 | NT | 10.4% | intergenic (‑43/‑150) | asd/yhgN | aspartate‑semialdehyde dehydrogenase/putative inner membrane protein |
| ? | NC_000913 | = 3574932 | 81 (0.900) | intergenic (‑54/‑139) | asd/yhgN | aspartate‑semialdehyde dehydrogenase/putative inner membrane protein | |||||
| * | ? | NC_000913 | = 3599245 | 90 (0.950) | 5 (0.050) | 4/266 | NT | 5.4% | coding (414/1104 nt) | livJ | branched chain amino acid/phenylalanine ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 3599279 | 88 (0.950) | coding (380/1104 nt) | livJ | branched chain amino acid/phenylalanine ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | 3603646 = | 101 (1.060) | 8 (0.090) | 8/264 | NT | 7.9% | coding (598/1494 nt) | ftsY | signal recognition particle receptor |
| ? | NC_000913 | 3603693 = | 90 (0.980) | coding (551/1494 nt) | ftsY | signal recognition particle receptor | |||||
| * | ? | NC_000913 | = 3620116 | NA (NA) | 4 (0.040) | 4/262 | NT | 100% | coding (925/4236 nt) | rhsB | rhs element protein RhsB |
| ? | NC_000913 | = 3620152 | 0 (0.000) | coding (961/4236 nt) | rhsB | rhs element protein RhsB | |||||
| * | ? | NC_000913 | 3622402 = | 75 (0.790) | 4 (0.040) | 3/262 | NT | 5.3% | coding (3211/4236 nt) | rhsB | rhs element protein RhsB |
| ? | NC_000913 | 3622442 = | NA (NA) | coding (3251/4236 nt) | rhsB | rhs element protein RhsB | |||||
| * | ? | NC_000913 | = 3675218 | 80 (0.840) | 7 (0.080) | 5/260 | NT | 8.0% | coding (433/1323 nt) | yhjE | putative transporter YhjE |
| ? | NC_000913 | = 3675243 | 86 (0.950) | coding (458/1323 nt) | yhjE | putative transporter YhjE | |||||
| * | ? | NC_000913 | 3717215 = | 111 (1.170) | 7 (0.080) | 7/250 | NT | 7.1% | intergenic (+9/‑95) | yiaD/ghrB | PF13488 family lipoprotein YiaD/glyoxylate reductase |
| ? | NC_000913 | 3717245 = | 83 (0.960) | intergenic (+39/‑65) | yiaD/ghrB | PF13488 family lipoprotein YiaD/glyoxylate reductase | |||||
| * | ? | NC_000913 | = 3844365 | 69 (0.730) | 6 (0.070) | 5/260 | NT | 8.5% | coding (402/1767 nt) | adeD | adenine deaminase |
| ? | NC_000913 | = 3844391 | 64 (0.710) | coding (428/1767 nt) | adeD | adenine deaminase | |||||
| * | ? | NC_000913 | = 3850327 | 80 (0.840) | 6 (0.070) | 3/262 | NT | 7.1% | coding (400/591 nt) | uhpA | DNA‑binding transcriptional activator UhpA |
| ? | NC_000913 | = 3850357 | 80 (0.880) | coding (370/591 nt) | uhpA | DNA‑binding transcriptional activator UhpA | |||||
| * | ? | NC_000913 | = 3869187 | 70 (0.740) | 7 (0.080) | 5/262 | NT | 9.2% | coding (123/1248 nt) | yidR | DUF3748 domain‑containing galacturonate catabolism protein YidR |
| ? | NC_000913 | = 3869215 | 71 (0.780) | coding (95/1248 nt) | yidR | DUF3748 domain‑containing galacturonate catabolism protein YidR | |||||
| * | ? | NC_000913 | = 3943624 | NA (NA) | 8 (0.090) | 8/260 | NT | 16.7% | intergenic (+114/‑80) | gltU/rrlC | tRNA‑Glu/23S ribosomal RNA |
| ? | NC_000913 | = 4037457 | 42 (0.440) | intergenic (+122/‑62) | alaT/rrlA | tRNA‑Ala/23S ribosomal RNA | |||||
| * | ? | NC_000913 | 4015241 = | 89 (0.940) | 6 (0.070) | 6/260 | NT | 6.6% | coding (2189/2262 nt) | metE | cobalamin‑independent homocysteine transmethylase |
| ? | NC_000913 | 4015267 = | 85 (0.940) | coding (2215/2262 nt) | metE | cobalamin‑independent homocysteine transmethylase | |||||
| * | ? | NC_000913 | = 4035825 | 25 (0.260) | 3 (0.030) | 3/260 | NT | 11.2% | noncoding (295/1542 nt) | rrsA | 16S ribosomal RNA |
| ? | NC_000913 | = 4166962 | NA (NA) | noncoding (304/1542 nt) | rrsB | 16S ribosomal RNA | |||||
| * | ? | NC_000913 | 4037397 = | 41 (0.430) | 9 (0.100) | 3/270 | NT | 7.2% | intergenic (+62/‑122) | alaT/rrlA | tRNA‑Ala/23S ribosomal RNA |
| ? | NC_000913 | 4168483 = | 192 (2.050) | intergenic (+36/‑158) | gltT/rrlB | tRNA‑Glu/23S ribosomal RNA | |||||
| * | ? | NC_000913 | = 4040683 | 111 (1.170) | 7 (0.070) | 6/270 | NT | 6.8% | intergenic (+47/+223) | rrfA/mobB | 5S ribosomal RNA/molybdopterin‑guanine dinucleotide biosynthesis adaptor protein |
| ? | NC_000913 | = 4213162 | 84 (0.900) | intergenic (+3/‑72) | rrfE/yjaA | 5S ribosomal RNA/stress response protein | |||||
| * | ? | NC_000913 | = 4077788 | 86 (0.900) | 6 (0.070) | 6/264 | NT | 7.0% | coding (340/990 nt) | yiiD | putative acetyltransferase YiiD |
| ? | NC_000913 | = 4077818 | 76 (0.830) | coding (370/990 nt) | yiiD | putative acetyltransferase YiiD | |||||
| * | ? | NC_000913 | 4085413 = | 77 (0.810) | 4 (0.040) | 4/260 | NT | 5.0% | coding (410/3051 nt) | fdoG | formate dehydrogenase O subunit alpha |
| ? | NC_000913 | 4085454 = | 78 (0.860) | coding (369/3051 nt) | fdoG | formate dehydrogenase O subunit alpha | |||||
| * | ? | NC_000913 | 4089681 = | 104 (1.090) | 7 (0.080) | 6/258 | NT | 6.7% | coding (175/1749 nt) | frvR | putative transcriptional regulator FrvR |
| ? | NC_000913 | 4089713 = | 97 (1.080) | coding (143/1749 nt) | frvR | putative transcriptional regulator FrvR | |||||
| * | ? | NC_000913 | = 4104183 | 87 (0.910) | 5 (0.050) | 5/262 | NT | 5.5% | coding (793/1374 nt) | cpxA | sensory histidine kinase CpxA |
| ? | NC_000913 | = 4104189 | 88 (0.970) | coding (787/1374 nt) | cpxA | sensory histidine kinase CpxA | |||||
| * | ? | NC_000913 | = 4171445 | NA (NA) | 17 (0.180) | 11/268 | NT | NA | noncoding (2805/2904 nt) | rrlB | 23S ribosomal RNA |
| ? | NC_000913 | = 4212832 | NA (NA) | noncoding (2790/2904 nt) | rrlE | 23S ribosomal RNA | |||||
| * | ? | NC_000913 | = 4171803 | 236 (2.480) | 31 (0.330) | 12/270 | NT | 16.4% | intergenic (+47/‑254) | rrfB/murB | 5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase |
| ? | NC_000913 | = 4213162 | 84 (0.900) | intergenic (+3/‑72) | rrfE/yjaA | 5S ribosomal RNA/stress response protein | |||||
| * | ? | NC_000913 | 4200145 = | 235 (2.470) | 17 (0.190) | 12/252 | NT | 7.3% | intergenic (+51/‑136) | yjaG/hupA | conserved protein YjaG/DNA‑binding protein HU‑alpha |
| ? | NC_000913 | 4200182 = | 218 (2.490) | intergenic (+88/‑99) | yjaG/hupA | conserved protein YjaG/DNA‑binding protein HU‑alpha | |||||
| * | ? | NC_000913 | 4242538 = | 119 (1.250) | 6 (0.070) | 5/258 | NT | 5.3% | intergenic (‑284/+88) | xylE/malG | D‑xylose:H(+) symporter/maltose ABC transporter membrane subunit MalG |
| ? | NC_000913 | 4242556 = | 102 (1.140) | intergenic (‑302/+70) | xylE/malG | D‑xylose:H(+) symporter/maltose ABC transporter membrane subunit MalG | |||||
| * | ? | NC_000913 | 4247454 = | 67 (0.700) | 6 (0.070) | 5/260 | NT | 9.1% | coding (671/1116 nt) | malK | maltose ABC transporter ATP binding subunit |
| ? | NC_000913 | 4247481 = | 56 (0.620) | coding (698/1116 nt) | malK | maltose ABC transporter ATP binding subunit | |||||
| * | ? | NC_000913 | 4257736 = | 83 (0.870) | 9 (0.100) | 8/260 | NT | 10.4% | intergenic (+13/‑6) | lexA/dinF | DNA‑binding transcriptional repressor LexA/DNA damage‑inducible protein F |
| ? | NC_000913 | 4257762 = | 77 (0.850) | coding (21/1380 nt) | dinF | DNA damage‑inducible protein F | |||||
| * | ? | NC_000913 | = 4342224 | 72 (0.760) | 7 (0.080) | 6/264 | NT | 8.7% | coding (314/1356 nt) | melA | alpha‑galactosidase |
| ? | NC_000913 | = 4342242 | 78 (0.850) | coding (332/1356 nt) | melA | alpha‑galactosidase | |||||
| * | ? | NC_000913 | = 4377075 | 79 (0.830) | 5 (0.050) | 4/262 | NT | 5.7% | coding (201/318 nt) | gdx | guanidinium exporter |
| ? | NC_000913 | = 4377127 | 91 (1.000) | coding (253/318 nt) | gdx | guanidinium exporter | |||||
| * | ? | NC_000913 | = 4394401 | 89 (0.940) | 7 (0.080) | 5/254 | NT | 7.8% | coding (336/1548 nt) | nnr | NAD(P)HX epimerase/NAD(P)HX dehydratase |
| ? | NC_000913 | = 4394421 | 83 (0.940) | coding (356/1548 nt) | nnr | NAD(P)HX epimerase/NAD(P)HX dehydratase | |||||
| * | ? | NC_000913 | 4415962 = | NA (NA) | 8 (0.090) | 8/262 | NT | NA | noncoding (31/34 nt) | other | REP332 |
| ? | NC_000913 | 4415992 = | NA (NA) | noncoding (1/34 nt) | other | REP332 | |||||
| * | ? | NC_000913 | = 4475091 | 88 (0.930) | 6 (0.070) | 6/260 | NT | 6.4% | coding (230/453 nt) | tabA | DUF386 domain‑containing toxin‑antitoxin biofilm protein TabA |
| ? | NC_000913 | = 4475099 | 93 (1.030) | coding (238/453 nt) | tabA | DUF386 domain‑containing toxin‑antitoxin biofilm protein TabA | |||||
| * | ? | NC_000913 | = 4497499 | 100 (1.050) | 6 (0.070) | 5/262 | NT | 5.5% | pseudogene (750/1191 nt) | intB | KpLE2 phage‑like element; putative integrase |
| ? | NC_000913 | = 4497525 | 110 (1.210) | pseudogene (776/1191 nt) | intB | KpLE2 phage‑like element; putative integrase | |||||
| * | ? | NC_000913 | = 4536412 | NA (NA) | 6 (0.070) | 5/262 | NT | NA | noncoding (7/26 nt) | other | REPt344 |
| ? | NC_000913 | = 4536422 | NA (NA) | noncoding (17/26 nt) | other | REPt344 | |||||
| * | ? | NC_000913 | 4542682 = | 35 (0.370) | 123 (1.380) | 90/256 | NT | 81.5% | intergenic (+49/‑433) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit |
| ? | NC_000913 | 4542996 = | 23 (0.260) | intergenic (+363/‑119) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit | |||||
| * | ? | NC_000913 | = 4542690 | 37 (0.390) | 171 (1.920) | 111/256 | NT | 85.6% | intergenic (+57/‑425) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit |
| ? | NC_000913 | = 4542986 | 23 (0.260) | intergenic (+353/‑129) | fimE/fimA | regulator for fimA/type 1 fimbriae major subunit | |||||
| * | ? | NC_000913 | = 4607057 | 88 (0.930) | 5 (0.060) | 5/260 | NT | 5.2% | coding (644/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase |
| ? | NC_000913 | = 4607079 | 99 (1.100) | coding (622/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase | |||||
| * | ? | NC_000913 | 4639801 = | 102 (1.070) | 5 (0.050) | 5/262 | NT | 5.3% | coding (506/717 nt) | arcA | DNA‑binding transcriptional dual regulator ArcA |
| ? | NC_000913 | 4639844 = | 80 (0.880) | coding (463/717 nt) | arcA | DNA‑binding transcriptional dual regulator ArcA | |||||