| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3700159 | 201 (1.780) | 20 (0.180) | 12/262 | NT | 9.8% | noncoding (24/64 nt) | rdlD | antisense regulatory RNA RdlD |
| ? | NC_000913 | = 3700189 | 174 (1.610) | noncoding (54/64 nt) | rdlD | antisense regulatory RNA RdlD | |||||
ACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3700005‑3700159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccgCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCACTCAAGAATAGCCGCGAAACGTTGTCATTACAACACAGGCGGCTATATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGC < NC_000913/3700189‑3700041 ACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGC < 1:1775029/150‑1ACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGC < 1:574756/150‑1ACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGC < 2:1407080/150‑1 CGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCC > 2:693934/1‑150 CGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCC > 2:1707822/1‑150 CGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAAACATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCC > 2:1484077/1‑150 ATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCC < 1:851737/150‑1 TCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCC > 1:1001393/1‑150 CGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGG < 1:1299878/150‑1 AAATCATGCCAGAAGGCCATGCCCATCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAACCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGG < 1:1887323/147‑1 AAATCATGCCAGAAGGCCATGCCCATCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAACCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGG > 2:1887323/1‑147 AAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTTAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGC < 2:671847/150‑1 AAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGC < 2:665057/150‑1 AATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCT > 2:1189116/1‑150 AATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCT < 1:85324/150‑1 AATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCT > 2:85324/1‑150 ATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAACCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTA > 2:1666733/1‑150 TCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAG‑CCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAAT < 2:1914077/150‑1 ATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATC < 1:890215/150‑1 ATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATC < 1:1853350/150‑1 ATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATC < 1:1189116/150‑1 TGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCT < 2:311897/150‑1 TGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCT < 1:1454950/150‑1 GAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGC < 1:472790/139‑1 GAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGC > 2:472790/1‑139 GAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGG < 1:695764/136‑1 GAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGG > 2:695764/1‑136 GAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAACCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACT < 1:1666733/150‑1 CCCCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCACTCAAGAATAGCCGCGAAACGTTGTCATTACAACACAGGCGGCTATATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTA > 1:763375/1‑150 CCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCACTCAAGAATAGCCGCGAAACGTTGTCATTACAACACAGGCGGCTATATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGC > 1:310020/1‑150 CCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCACTCAAGAATAGCCGCGAAACGTTGTCATTACAACACAGGCGGCTATATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGC < 1:235616/150‑1 CCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCACTCAAGAATAGCCGCGAAACGTTGTCATTACAACACAGGCGGCTATATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGC < 1:1932650/150‑1 CCCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCACTCAAGAATAGCCGCGAAACGTTGTCATTACAACACAGGCGGCTATATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGC < 2:334387/150‑1 CCGCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCACTCAAGAATAGCCGCGAAACGTTGTCATTACAACACAGGCGGCTATATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCG < 2:1642186/150‑1 GCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCACTCAAGAATAGCCGCGAAACGTTGTCATTACAACACAGGCGGCTATATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGC < 2:1903667/150‑1 ACGATCATACTGGCAAGAATGCCAGCAATGACCGGAGCCGCTAAATCATGCCAGAAGGCCATGCCCAGCTCTGCGAACGTCATATAGCCGCCTGTGTTGTAATGACAACGTTTCGCGGCTATTCTTGAGTGGTCTAGAGTCAAGATTAGCCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3700005‑3700159‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccgCACGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCACTCAAGAATAGCCGCGAAACGTTGTCATTACAACACAGGCGGCTATATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGC < NC_000913/3700189‑3700041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |