New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2304533	NA (NA)	4 (0.040)	3/268	NT	NA	noncoding (32/34 nt)	other	REP161c
	?	NC_000913	= 2304789	NA (NA)					noncoding (2/34 nt)	other	REP161g

CCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAA  >  NC_000913/2304398‑2304682                                                                                                                                        |                                                                                                                                                      ccGTGAAGTGCGGAACCCCGCTGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCTACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCgg                                                                                                                                         <  1:1720825/150‑1 (MQ=255)   gTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTGCACCCCGTAGgtcgggggcggcgggg                                                                                                                                       >  1:357257‑M1/1‑134 (MQ=255)       aGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgc                                                                                                                                   <  2:1556599/150‑1 (MQ=255)       aGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgc                                                                                                                                   >  1:1556666/1‑150 (MQ=255)        gTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGTTTGCCTTATTCTACTCTGTCTCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgcc                                                                                                                                  <  2:269411/150‑1 (MQ=14)         cgCGGCACCCCGTACGTCAGCCTAGGCCGCCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGAGGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCAcgccg                                                                                                                                 <  1:779428/149‑1 (MQ=14)                  ccGTAGGTCCGACAAGGCGGTTACGCCGCATCCGACATCTAACGCCCCAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGgtcggatgcggcgtaaccgccttatccaacc                                                                                                                        <  2:357257‑M1/150‑32 (MQ=255)                    gTAGGTCAGACAACGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCTTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATc                                                                                                                      <  2:1555884/150‑1 (MQ=255)                            gACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGccc                                                                                                              >  2:1166357/1‑150 (MQ=255)                              cAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGAGATGTGCGGCGCCCCCTAGGTAACTCAAGTCGCGGGCGCCGCAGCCGACCACGAACGCCCGa                                                                                                            >  1:464638/1‑150 (MQ=11)                               aaGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTAAAAGGCCTACACACCTGTTAAGTAAGGCACACCGAAGGTCAAACAAGGCGGTCACGCCGAATCAGAAATAAAAAGCCCGAg                                                                                                           >  2:288818/1‑150 (MQ=14)                                        aggccgcATCCGACATCAAACGCCCGAGCGGGTTGCCGGATGCGACGCTGGCGAGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGcc                                                                                                  <  2:437863/148‑1 (MQ=255)                                                 ccGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGACTACACCGCTGTGAAGTGCTGCACCCCGTAGGTAAGAAAAGGCGGTAACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGAc                                                                                         >  2:1566813/1‑150 (MQ=11)                                                 ccGACATCCAACGCCCGAGCCGGTTGCATGATGCGACGATGGCGAGTCTTATCAGGACTACACCGCTGTGAAGTGCTGCACCCCGTAGGTCAGAAAAAACGGTAACGCCGCATCCGACATCAAACGCCCGAGCCGGTTGCAGGAAGCGAc                                                                                         >  2:682175/1‑150 (MQ=11)                                                             gCCCGAGCCGGTTGCCTGATGCGACGCTAGCGCATCATATAAGTCCTACAAAGCAGTGAAGTAAGGAAAACCGAAGGTAAGACAAGGAGGTAAAGAAGCATAAGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCGGGCGCGTCt                                                                             >  2:1238152/1‑150 (MQ=9)                                                                              gATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGgttggatgcggcgtaaccgccttatccaacctacggggtggagcacttcacagcggtgtaggcctg                                                                                     >  1:1899897‑M1/1‑59 (MQ=255)                                                                              gATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGgttggatgcggcgtaaccgccttatccaacctacggggtggagcacttcacagcggtgtaggcctg                                                                                     <  2:1899897‑M1/125‑67 (MQ=255)                                                                                ttggACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCtg                                                          <  2:1580255/147‑1 (MQ=255)                                                                                              gTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCACTGTGAAGTGCTCCAcc                                            <  1:1166357/150‑1 (MQ=255)                                                                                                  tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGt                                        <  2:1194670/150‑1 (MQ=255)                                                                                                  tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGt                                        >  2:1551794/1‑150 (MQ=255)                                                                                                  tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCAGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGCAGTGGTCCAACCCGt                                        >  1:939907/1‑150 (MQ=255)                                                                                                   aTCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTGCACCCCGTa                                       >  1:1194670/1‑150 (MQ=255)                                                                                                     cAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACCCTCGCCCGACATATCAGCCCTCCACACCAGTGAACTGCTCCACACCGTacg                                     >  1:395750/1‑148 (MQ=14)                                                                                                        gCCTAAACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGAGAAGGCTGTCACGCCTCATCCTACATCCAACGCCCGAGGCGGTTGCCTTATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCg                                  <  1:1494111/150‑1 (MQ=14)                                                                                                               ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCt                                                                   <  1:380639/110‑1 (MQ=35)                                                                                                               ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCt                                                                   >  2:380639/1‑110 (MQ=35)                                                                                                               ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAgg                           >  1:302009/1‑150 (MQ=255)                                                                                                                 gCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGGATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCg                         <  2:1556666/150‑1 (MQ=255)                                                                                                                      gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCTACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCACCACCCCGTAGGTCGGATAAGGCGGTTAc                    <  1:1872629/150‑1 (MQ=255)                                                                                                                      gAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGGGGTTag                    >  1:1483337/1‑149 (MQ=255)                                                                                                                        aGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGACCGAGCCGGATAACTGATGCGACGCTGGAACGTCTAAACAGGCCTAAACAGATGTGAAGTGCTCGACCCCGTAGGTAGGAAAAAGAGGTTAcgc                  >  2:483830/1‑150 (MQ=14)                                                                                                                          tGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccg                >  1:1193179/1‑150 (MQ=255)                                                                                                                           gCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCCACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccgc               >  1:1606571/1‑150 (MQ=255)                                                                                                                           gCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGAGGCGACGCGGCCGCGGGGTAGCCGGCGGACGCCGCGGTGAAGTGATCCCCCCCGTAGGTCGGATAAGGCGGGTGcgccgg               >  1:1938258/1‑149 (MQ=14)                                                                                                                                 ccccGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGa         >  2:1338001/1‑150 (MQ=255)                                                                                                                                 ccccGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCAGGCGCGGCGAATCAGGCCTCCACGCCAGTGAACTGCTCCACACCGTAGGTCGGATAAGGAGGTAAcgccgcctgcgg         >  1:357381/1‑144 (MQ=14)                                                                                                                                  cccGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGAc        >  1:1570882/1‑150 (MQ=255)                                                                                                                                   ccGTAGGTCTGACAAGGCGGTCACGCCGCATCCGACAGCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACa       <  1:1750814/150‑1 (MQ=255)                                                                                                                                        ggTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCa              <  1:96483/138‑1 (MQ=255)                                                                                                                                        ggTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCtga  >  1:1691482/1‑148 (MQ=255)                                                                                                                                        ggTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGACCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCa              >  2:96483/1‑138 (MQ=255)                                                                                                                                        |                                                                                                                                                      CCGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAA  >  NC_000913/2304398‑2304682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.