mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 121 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4558313 | 70 (0.860) | 3 (0.040) | 3/250 | NT | 4.4% | intergenic (‑24/+41) | hypT/iadA | DNA‑binding transcriptional dual regulator HypT/isoaspartyl dipeptidase |
| ? | NC_000913 | = 4558336 | 68 (0.920) | intergenic (‑47/+18) | hypT/iadA | DNA‑binding transcriptional dual regulator HypT/isoaspartyl dipeptidase | |||||
| * | ? | NC_000913 | 4497494 = | 169 (2.080) | 4 (0.050) | 4/262 | NT | 2.5% | pseudogene (745/1191 nt) | intB | KpLE2 phage‑like element; putative integrase |
| ? | NC_000913 | 4497532 = | 151 (1.940) | pseudogene (783/1191 nt) | intB | KpLE2 phage‑like element; putative integrase | |||||
| * | ? | NC_000913 | = 4477750 | 127 (1.560) | 4 (0.050) | 3/264 | NT | 3.1% | coding (562/1005 nt) | argI | ornithine carbamoyltransferase ArgI |
| ? | NC_000913 | = 4477776 | 125 (1.590) | coding (536/1005 nt) | argI | ornithine carbamoyltransferase ArgI | |||||
| * | ? | NC_000913 | 4467477 = | 207 (2.540) | 9 (0.120) | 8/258 | NT | 4.7% | coding (47/54 nt) | mgtL | leader peptide MgtL |
| ? | NC_000913 | 4467511 = | 174 (2.270) | intergenic (+27/‑114) | mgtL/mgtA | leader peptide MgtL/Mg(2(+)) importing P‑type ATPase | |||||
| * | ? | NC_000913 | 4457737 = | 178 (2.190) | 4 (0.050) | 4/268 | NT | 2.3% | coding (129/552 nt) | yjgA | DUF615 domain‑containing protein YjgA |
| ? | NC_000913 | 4457761 = | 171 (2.150) | coding (105/552 nt) | yjgA | DUF615 domain‑containing protein YjgA | |||||
| * | ? | NC_000913 | 4457562 = | 157 (1.930) | 4 (0.050) | 4/260 | NT | 2.6% | coding (304/552 nt) | yjgA | DUF615 domain‑containing protein YjgA |
| ? | NC_000913 | 4457597 = | 146 (1.890) | coding (269/552 nt) | yjgA | DUF615 domain‑containing protein YjgA | |||||
| * | ? | NC_000913 | 4456096 = | 169 (2.080) | 6 (0.080) | 5/266 | NT | 3.5% | coding (312/1374 nt) | mpl | UDP‑N‑acetylmuramate‑‑L‑alanyl‑gamma‑D‑glutamyl‑ meso‑2,6‑diaminoheptanedioate ligase |
| ? | NC_000913 | 4456136 = | 171 (2.160) | coding (352/1374 nt) | mpl | UDP‑N‑acetylmuramate‑‑L‑alanyl‑gamma‑D‑glutamyl‑ meso‑2,6‑diaminoheptanedioate ligase | |||||
| * | ? | NC_000913 | = 4445848 | 144 (1.770) | 5 (0.060) | 5/262 | NT | 3.5% | coding (1737/3780 nt) | tamB | translocation and assembly module subunit TamB |
| ? | NC_000913 | = 4445905 | 141 (1.810) | coding (1794/3780 nt) | tamB | translocation and assembly module subunit TamB | |||||
| * | ? | NC_000913 | 4438646 = | 203 (2.490) | 7 (0.090) | 7/254 | NT | 3.8% | intergenic (+1/+62) | ytfI/ytfJ | protein YtfI/protein YtfJ |
| ? | NC_000913 | 4438677 = | 170 (2.250) | intergenic (+32/+31) | ytfI/ytfJ | protein YtfI/protein YtfJ | |||||
| * | ? | NC_000913 | 4436864 = | 166 (2.040) | 6 (0.080) | 5/262 | NT | 3.9% | coding (110/741 nt) | cysQ | 3'(2'),5'‑bisphosphate nucleotidase |
| ? | NC_000913 | 4436897 = | 139 (1.790) | coding (143/741 nt) | cysQ | 3'(2'),5'‑bisphosphate nucleotidase | |||||