New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1463439 =83 (0.950)6 (0.070) 5/262 NT 7.0% intergenic (+1/‑100) paaK/paaX phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX
?NC_000913 1463490 = 81 (0.980)intergenic (+52/‑49) paaK/paaX phenylacetate‑CoA ligase/DNA‑binding transcriptional repressor PaaX

TTGCCAGGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCG  >  NC_000913/1463291‑1463586
                                                                                                                                                    |                                                                                                                                                      
atgggaaagcgaatcaccatacagagaggagatcaaagatgtgccactgaccggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCg                                                                                                                                                       >  2:29053‑M1/149‑150 (MQ=255)
  gCCAGGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTa                                                                                                                                                     >  2:1370406/1‑150 (MQ=255)
   ggaaagcgaatcaccatacagagaggagatcaaagatgtgccactgaccggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTAt                                                                                                                                                    <  1:910760‑M1/5‑1 (MQ=255)
    gaaagcgaatcaccatacagagaggagatcaaagatgtgccactgaccggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTATc                                                                                                                                                   >  2:255852‑M1/145‑150 (MQ=255)
    gaaagcgaatcaccatacagagaggagatcaaagatgtgccactgaccggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTATc                                                                                                                                                   <  1:854808‑M1/6‑1 (MQ=255)
       gTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑Tc                                                                                                                                             <  2:1240104/150‑1 (MQ=255)
            ccaccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGcc                                                                                                                                        >  1:1281280/1‑150 (MQ=255)
            ccaccaGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGGTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGcc                                                                                                                                        >  1:790508/1‑150 (MQ=255)
                   cTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCtggtgg                                                                                                                                 <  2:955838/150‑1 (MQ=255)
                           tCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAgc                                                                                                                         <  1:750790/150‑1 (MQ=255)
                             ggATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAgcgc                                                                                                                       >  1:97420/1‑150 (MQ=255)
                              gATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGcc                                                                                                                      >  2:327433/1‑150 (MQ=255)
                                 tAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAgg                                                                                                                   <  2:1148553/150‑1 (MQ=255)
                                   aagatgtgccactgaccggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGc                                                                                                                 >  1:1405403‑M1/114‑150 (MQ=255)
                                   aagatgtgccactgaccggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGc                                                                                                                 >  2:1122649‑M1/114‑150 (MQ=255)
                                    gTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGcc                                                                                                                >  2:150034/1‑150 (MQ=255)
                                    gTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGGGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGGGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGcc                                                                                                                <  1:814607/150‑1 (MQ=255)
                                     tCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCa                                                                                                               >  2:1258023/1‑150 (MQ=255)
                                        gtgccactgaccggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttatgaatcatagcacaggtCGTATCGACTTCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCa                                                                                                               >  1:799702‑M1/109‑150 (MQ=255)
                                         tggtggGGCTCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCCGGGCcagcag                                                                                                           >  2:1468604/1‑150 (MQ=255)
                                          ggtggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGt                                                                                                          >  1:1057776/1‑150 (MQ=255)
                                          ggtggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGt                                                                                                          >  1:243754/1‑150 (MQ=255)
                                            tggGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCg                                                                                                        <  2:1284046/150‑1 (MQ=255)
                                              gggATCTCTACTGATGTGATGATCGTTAACTGTGGAAGTATCCCGCGTTCATAAGGCAAGGCGTGTCGGGTGTTTGTTCTGCGCAATTTTGTTGGTGCCTTACGTTTCG‑‑‑TCGGGCGCTGGTGGGTTATAGCGCCATGGCCAGAAGTCGAt                                                                                                      <  2:730038/150‑1 (MQ=255)
                                              gggATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGAt                                                                                                      <  1:149159/150‑1 (MQ=255)
                                              gggATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGAt                                                                                                      >  1:731475/1‑150 (MQ=255)
                                              gggATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGAt                                                                                                      <  1:143812/150‑1 (MQ=255)
                                                  ccggaccagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgtggttattgttgtgatttatgaatcatagcacaggtCGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGa                                                                                                  >  2:277933‑M1/99‑150 (MQ=255)
                                                   ctctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGAc                                                                                                 >  1:998757/1‑150 (MQ=255)
                                                   ctctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGAc                                                                                                 <  1:1403509/150‑1 (MQ=255)
                                                    ggaacagcgtttacagcatgttggataaaagtatcaagtttactcattcgcttcagtctgttgttattgttgtgatttattaatcatagcacaggtCGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGAcc                                                                                                >  2:431256‑M1/97‑150 (MQ=255)
                                                     ctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCt                                                                                               >  2:1241386/1‑150 (MQ=255)
                                                     ctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCt                                                                                               >  2:408211/1‑150 (MQ=255)
                                                     ctACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCt                                                                                               >  2:661778/1‑150 (MQ=255)
                                                        ccGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCtgtg                                                                                            >  2:1337662/1‑150 (MQ=255)
                                                         cGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGc                                                                                           <  2:769462/150‑1 (MQ=255)
                                                            tgtgATGATCGTTAACTGTGGCAGTATCCCGCGTTCATAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTAt                                                                                        <  2:1423223/150‑1 (MQ=255)
                                                             gtgATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATg                                                                                       <  2:343687/150‑1 (MQ=255)
                                                              tgatgaTCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGa                                                                                      >  1:1392963/1‑150 (MQ=255)
                                                               gatgatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAt                                                                                     >  2:536747/1‑150 (MQ=255)
                                                                atgatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGTGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGAtt                                                                                    <  2:251788/150‑1 (MQ=255)
                                                                  gatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCa                                                                                  >  1:921207/1‑150 (MQ=255)
                                                                  gatCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTGGATCTGGGCAATATTGTTGGTGCCTTACGTATCG‑‑‑TCTGGCCCTGGGGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCa                                                                                  <  2:1066005/150‑1 (MQ=255)
                                                                   atCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCAt                                                                                 >  1:1142908/1‑150 (MQ=255)
                                                                     cGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATaa                                                                               >  1:1187701/1‑150 (MQ=255)
                                                                      gTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATaaa                                                                              >  2:723214/1‑150 (MQ=255)
                                                                       ttAACTGTGGCAGTATCCCGCGTTCAGAAGGCATGGGGTGTCGGGGGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAAt                                                                             <  1:763995/150‑1 (MQ=255)
                                                                         aaCTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATca                                                                           <  1:408211/150‑1 (MQ=255)
                                                                          aCTTTGGCAGTATCCCTCGGTCAGAAGGGTCGGCTTGGCGGGTGTTTGATCTGCGCATTATTGTTTGCTCCTGCCTGATCG‑‑‑TCTTGCCGTGGTTTGGCAACGCTCAAGGGCCAGAAGTAGATAAGACCTGTGCTATGATTCATAAATcac                                                                          <  2:1245650/150‑1 (MQ=255)
                                                                              tgGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCacaaca                                                                      <  1:1258023/150‑1 (MQ=255)
                                                                               ggCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCAcaacaa                                                                     >  2:465783/1‑150 (MQ=255)
                                                                               ggCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCAcaacaa                                                                     >  1:627633/1‑150 (MQ=255)
                                                                                gCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAAt                                                                    <  2:931590/150‑1 (MQ=255)
                                                                                    tATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaaca                                                                <  1:723214/150‑1 (MQ=255)
                                                                                    tATCCCGCGTGCAGAAGGCAAGGCGTGGCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATaaca                                                                <  2:1024822/150‑1 (MQ=255)
                                                                                       cccGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAacaaca                                                             >  2:776572/1‑150 (MQ=255)
                                                                                         cgcgTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                           >  1:980365/1‑150 (MQ=255)
                                                                                         cgcgTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGa                                                           >  2:910760/1‑150 (MQ=255)
                                                                                          gcgTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGAc                                                          <  1:986541/150‑1 (MQ=255)
                                                                                            gTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAAACACAACAATAACAACAGACTg                                                        >  2:323691/1‑150 (MQ=255)
                                                                                             ttCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGa                                                       <  1:367124/150‑1 (MQ=255)
                                                                                              tCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGaa                                                      >  2:717656/1‑150 (MQ=255)
                                                                                                aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGc                                                    >  2:825876/1‑150 (MQ=255)
                                                                                                aGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGc                                                    <  1:98296/150‑1 (MQ=255)
                                                                                                    ggcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAAt                                                <  1:843344/150‑1 (MQ=255)
                                                                                                     gcaaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATg                                               <  2:1275324/150‑1 (MQ=255)
                                                                                                     gcaagccGTGTCGGGGGTTTGATCTGCGCAATATTGTTGTTGCCGGACGAATCG‑‑‑TCTGGCCCTGGTGTGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAAGAGACTGAAGCGAATg                                               <  2:763242/150‑1 (MQ=255)
                                                                                                      caaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATcaca                                                                         <  1:581574/123‑1 (MQ=255)
                                                                                                      caaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATcaca                                                                         >  2:581574/1‑123 (MQ=255)
                                                                                                      caaggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGa                                              >  1:83699/1‑150 (MQ=255)
                                                                                                         ggcGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTa                                           >  1:481995/1‑150 (MQ=255)
                                                                                                             ctgttgttattgttgtgatttatgaatcatagcacaggtCGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACt                                       >  2:1500210‑M1/40‑150 (MQ=255)
                                                                                                               tCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTg                                     <  1:661778/150‑1 (MQ=255)
                                                                                                                cGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGa                                    <  2:1281280/150‑1 (MQ=255)
                                                                                                                 gggTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGAt                                   >  1:973980/1‑150 (MQ=255)
                                                                                                                 gggTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGAt                                   <  2:1187701/150‑1 (MQ=255)
                                                                                                                    tgtTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACt                                <  2:731475/150‑1 (MQ=255)
                                                                                                                     gtTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACtt                               >  1:1233946/1‑150 (MQ=255)
                                                                                                                       ttGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAACGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACtttt                             <  2:1197057/150‑1 (MQ=255)
                                                                                                                        tGATCTGCGCAATATTGTTGGTGCCTGACTTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAAGAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTa                            <  2:998757/150‑1 (MQ=255)
                                                                                                                        tGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTa                            >  2:1353393/1‑150 (MQ=255)
                                                                                                                        tGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTa                            <  1:150034/150‑1 (MQ=255)
                                                                                                                         gATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTAt                           <  2:790508/150‑1 (MQ=255)
                                                                                                                         gATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTAt                           <  1:327433/150‑1 (MQ=255)
                                                                                                                           tCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATcc                         <  2:1057776/150‑1 (MQ=255)
                                                                                                                            cTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCa                        <  1:717656/150‑1 (MQ=255)
                                                                                                                                  aaTATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGc                  <  1:498261/150‑1 (MQ=255)
                                                                                                                                     atTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGt               >  1:105716/1‑150 (MQ=255)
                                                                                                                                          tgGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACg          <  2:973980/150‑1 (MQ=255)
                                                                                                                                           ggTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGc         <  2:627633/150‑1 (MQ=255)
                                                                                                                                           ggTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGc         <  1:388693/150‑1 (MQ=255)
                                                                                                                                              gCCTGACGTTTCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGt      <  2:1169306/150‑1 (MQ=255)
                                                                                                                                              gCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGt      <  1:1241386/150‑1 (MQ=255)
                                                                                                                                              gCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGt      <  1:1297595/150‑1 (MQ=255)
                                                                                                                                               ccTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGtt     >  1:1538451/1‑150 (MQ=255)
                                                                                                                                                cTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTc    >  1:450280/1‑150 (MQ=255)
                                                                                                                                                 tGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTcc   >  2:1199858/1‑150 (MQ=255)
                                                                                                                                                 tGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTcc   <  2:980365/150‑1 (MQ=255)
                                                                                                                                                  gACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCg  >  1:1363691/1‑150 (MQ=255)
                                                                                                                                                  gACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCg  >  1:1114581/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
TTGCCAGGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGACGTATCG‑‑‑TCTGGCCCTGGTGGGGTAAAGCGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAATAACAACAGACTGAAGCGAATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCG  >  NC_000913/1463291‑1463586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.