| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3621905 | NA (NA) | 3 (0.040) | 3/264 | NT | 100% | coding (2714/4236 nt) | rhsB | rhs element protein RhsB |
| ? | NC_000913 | = 3621923 | 0 (0.000) | coding (2732/4236 nt) | rhsB | rhs element protein RhsB | |||||
ACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAA > NC_000913/3621770‑3622053 | aCGACTACGGCGAACTCATCCGCATCATCATCCCGCGGCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCTTATGCCACAGACCCGGCAGGTAACCGCC > 2:550730‑M2/1‑150 (MQ=255)aCGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCC > 1:1089041‑M2/1‑150 (MQ=255) gACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCag > 2:1532509‑M2/1‑148 (MQ=255) cAACGGCGACCTCAACCGCATCAGCAGCCCGCGCCAGACCCGGAGATACAGCTACAGCACCACCGGCAGGCTGACCGGCGATCACACCACCGCACCGAATCTGGATATCCGCATCCCGTATGACACAGACCCGGCACGTAACCGCCTGCC < 2:891784‑M2/150‑1 (MQ=255) cAACGGCGAACTCCTCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCC > 1:1161747‑M2/1‑150 (MQ=255) gACCCGGCAGGTAACCGCCTGCCgggtctgtggcatacgggatgcggatatccagattcgctgcggtggtgtgaacgccggtcagcctgccggtggtgctgtagctgtaactccgggtctggcgcgggctgctgatgcggatgagttcga < 1:31016‑M2/150‑128 (MQ=255) cccGGCAGGTAACCGCCTGCCgggtctgtggcatacgggatgcggatatccagattcgctgcggtggtgtgaacgccggtcagcctgccggtggtgctgtagctgtaactccgggtctggcgcgggctgctgatgcggatgagttcgccg < 1:388522‑M2/150‑130 (MQ=255) ccGGCAGGTAACCGCCTGCCgggtctgtggcatacgggatgcggatatccagattcgctgcggtggtgtgaacgccggtcagcctgccggtggtgctgtagctgtaactccgggtctggcgcgggctgctgatgcggatgagttcgccgt < 2:148333‑M2/150‑131 (MQ=255) | ACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAA > NC_000913/3621770‑3622053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |