New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1909042 = | 89 (0.960) | 6 (0.070) | 4/264 | NT | 6.7% | coding (118/240 nt) | yobH | protein YobH |
? | NC_000913 | 1909080 = | 81 (0.920) | coding (156/240 nt) | yobH | protein YobH |
CTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCACGATATTGCTTTTGCGTAACAGCGGGCAATCTGTTATCCCCAAAAAACCACTTTTAGTGTGCAAGTATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1909196‑1909042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtacaATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATA > NC_000913/1909080‑1909227 CTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCACGATATTGCTTTTGCGTAACAGCGGGCAATCTGTTATCCCCAAAAAACCACTTTTAGTGTGCAAGTATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAG < 2:1366814/150‑1 TCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCACGATATTGCTTTTGCGTAACAGCGGGCAATCTGTTATCCCCAAAAAACCACTTTTAGTGTGCAAGTATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGG < 1:1180973/150‑1 CAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCACGATATTGCTTTTGCGTAACAGCGGGCAATCTGTTATCCCCAAAAAACCACTTTTAGTGTGCAAGTATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGGT > 1:1362709/1‑150 AGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCACGATATTGCTTTTGCGTAACAGCGGGCAATCTGTTATCCCCAAAAAACCACTTTTAGTGTGCAAGTATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGGTA < 2:865317/150‑1 AAGTATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGGTACAATACTTGCACACTAAAAGTGGATTTTTGGGGATAACAGATTGCCCTCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTC > 2:1464739/1‑150 AAGTATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGGTACAATACTTGAACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCTCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTC > 2:1458842/1‑150 cTATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGGTACAATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATTGTTAAGGGCAATAAATAACAAGATTCTC > 1:550073/2‑150 TATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGGTACAATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCA > 2:913305/1‑150 ATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGGTACAATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCAC > 1:245973/1‑150 CGTGCTGGTGCCTCTGGCAGTCAGATAGGTACAATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAG < 1:913305/150‑1 ACAATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAAT > 2:327308/1‑150 ACAATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAAT > 2:761661/1‑150 CAATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATA > 2:165437/1‑150 CAATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATA > 2:171273/1‑150 CTCAGGAGTGAGAATCTGGTTATTTATTGCCCTTAACCATTATCGACCACGATATTGCTTTTGCGTAACAGCGGGCAATCTGTTATCCCCAAAAAACCACTTTTAGTGTGCAAGTATTGTACCGTGCTGGTGCCTCTGGCAGTCAGATAGGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1909196‑1909042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtacaATACTTGCACACTAAAAGTGGTTTTTTGGGGATAACAGATTGCCCGCTGTTACGCAAAAGCAATATCGTGGTCGATAATGGTTAAGGGCAATAAATAACCAGATTCTCACTCCTGAGTAAAATACTCTTATAGCAAGCGCGTTTAATA > NC_000913/1909080‑1909227 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |