New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4113199 =	71 (0.770)	4 (0.050)	4/264	NT	5.5%	coding (233/300 nt)	yiiS	DUF406 domain‑containing protein YiiS
	?	NC_000913	4113226 =	69 (0.780)					coding (260/300 nt)	yiiS	DUF406 domain‑containing protein YiiS

TCACCAGTAAGGCATCTTCTTCATTCCCGGAAATTGCCACGCCAATGTGTTTATAAGCCATGTTTAACTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4113353‑4113199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGATGGAGTTGCTTTAGAAGGAGTTAAACATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTTACTGGTGAATAAAGCCCTGGAGCTCG  >  NC_000913/4113226‑4113371                                                                                                                                                                                                                                                                                                               TCACCAGTAAGGCATCTTCTTCATTCCCGGAAATTGCCACGCCAATTTGTTTATAAGCCATGTTTAACTCCTTATAAAGCAACTCCATCAAGCTAACGAACGAAGTGATAACTCAAAAATAATCATCTCGGCCTGGAATGAGAAAGTGAA                                                                                                                                                         >  2:1204914/1‑150  CACCAGTAAGGCATCTTCTTCATTCCCGGAAATTGCCACGCCAATGTGTTTATAAGCCATGTTTAACTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAG                                                                                                                                                        <  2:1534281/150‑1                                                                                             CTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAATGCCGAGATGATTATTTTTGAGTAATCACTGCGTTCGTTACCTTGATGGAGTTGCTTTAGAAGGAGTTAAACATGGCTTATAAACACATTGG                                                             >  1:1174976/1‑150                                                                                                 CGAACGCAGTGATAACTCAAAAATAATCATCTCGGCGTGGCATGAGAAAGTGAAGGCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGGTTGATGGAGTTGCTTTAGATGGAGTTAAACATGGCTTATAAACACATTGGCGTG                                                         >  1:1239006/1‑150                                                                                                                     AAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGATGGAGTTGCTTTAGAAGGAGTTAAACATGGCTTATAAACCCATTGGGGTGGCATTTTCGGGGAtggagga                                     >  1:519497/1‑143                                                                                                                              TCTCGGCCTGGCATGAGAAAGTGAAGGCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGATGGAGTTGCTTTAGAAGGAGTTAAACATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTT                            >  1:839346/1‑150                                                                                                                                                  GTGAAGGCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGATGGAGTTGCTTTAGAAGGAGTTAAACATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTTACTGGTGAATAAAGCCCTGG        <  2:839346/150‑1                                                                                                                                                        GCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGATGGAGTTGCTTTAGAAGGAGTTAAACATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTTACTGGTGAATAAAGCCCTGGAGCTCG  <  1:1534281/150‑1                                                                                                                                                                                                                                                                                                               TCACCAGTAAGGCATCTTCTTCATTCCCGGAAATTGCCACGCCAATGTGTTTATAAGCCATGTTTAACTCCTTCTAAAGCAACTCCATCAAGCTAACGAACGCAGTGATAACTCAAAAATAATCATCTCGGCCTGGCATGAGAAAGTGAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4113353‑4113199 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGATGGAGTTGCTTTAGAAGGAGTTAAACATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTTACTGGTGAATAAAGCCCTGGAGCTCG  >  NC_000913/4113226‑4113371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.