mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 159 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4627762 | 97 (1.050) | 4 (0.050) | 4/264 | NT | 4.1% | coding (448/1233 nt) | nadR | DNA‑binding transcriptional repressor/NMN adenylyltransferase NadR |
| ? | NC_000913 | = 4627768 | 95 (1.080) | coding (454/1233 nt) | nadR | DNA‑binding transcriptional repressor/NMN adenylyltransferase NadR | |||||
| * | ? | NC_000913 | 4621831 = | 101 (1.100) | 4 (0.050) | 4/260 | NT | 4.2% | coding (63/1332 nt) | yjjJ | toxin YjjJ |
| ? | NC_000913 | 4621874 = | 86 (0.990) | coding (106/1332 nt) | yjjJ | toxin YjjJ | |||||
| * | ? | NC_000913 | 4601307 = | 90 (0.980) | 4 (0.050) | 4/266 | NT | 4.7% | coding (211/540 nt) | dnaT | primosomal protein DnaT |
| ? | NC_000913 | 4601335 = | 74 (0.830) | coding (183/540 nt) | dnaT | primosomal protein DnaT | |||||
| * | ? | NC_000913 | 4541867 = | 175 (1.900) | 3 (0.030) | 3/266 | NT | 1.8% | intergenic (+308/‑170) | fimB/fimE | regulator for fimA/regulator for fimA |
| ? | NC_000913 | 4541881 = | 159 (1.790) | intergenic (+322/‑156) | fimB/fimE | regulator for fimA/regulator for fimA | |||||
| * | ? | NC_000913 | = 4338809 | 71 (0.770) | 3 (0.030) | 3/268 | NT | 4.1% | coding (1713/2268 nt) | adiA | arginine decarboxylase, degradative |
| ? | NC_000913 | = 4338852 | 72 (0.800) | coding (1670/2268 nt) | adiA | arginine decarboxylase, degradative | |||||
| * | ? | NC_000913 | = 4321140 | 76 (0.820) | 3 (0.030) | 3/266 | NT | 3.8% | coding (108/585 nt) | phnH | carbon‑phosphorus lyase core complex subunit PhnH |
| ? | NC_000913 | = 4321169 | 80 (0.900) | coding (79/585 nt) | phnH | carbon‑phosphorus lyase core complex subunit PhnH | |||||
| * | ? | NC_000913 | 4318981 = | 66 (0.720) | 3 (0.030) | 3/266 | NT | 4.2% | coding (626/846 nt) | phnJ | carbon‑phosphorus lyase core complex subunit PhnJ |
| ? | NC_000913 | 4319008 = | 73 (0.820) | coding (599/846 nt) | phnJ | carbon‑phosphorus lyase core complex subunit PhnJ | |||||
| * | ? | NC_000913 | 4237266 = | 88 (0.950) | 3 (0.030) | 3/264 | NT | 3.5% | coding (370/738 nt) | yjbG | capsule biosynthesis GfcC family protein YjbG |
| ? | NC_000913 | 4237302 = | 79 (0.900) | coding (406/738 nt) | yjbG | capsule biosynthesis GfcC family protein YjbG | |||||
| * | ? | NC_000913 | 4228725 = | 85 (0.920) | 3 (0.030) | 3/266 | NT | 3.7% | coding (995/1632 nt) | yjbB | putative inorganic phosphate export protein |
| ? | NC_000913 | 4228767 = | 73 (0.820) | coding (1037/1632 nt) | yjbB | putative inorganic phosphate export protein | |||||
| * | ? | NC_000913 | 4189417 = | 85 (0.920) | 4 (0.050) | 4/266 | NT | 4.8% | coding (4068/4224 nt) | rpoC | RNA polymerase subunit beta' |
| ? | NC_000913 | 4189455 = | 78 (0.880) | coding (4106/4224 nt) | rpoC | RNA polymerase subunit beta' | |||||