| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1436548 = | 37 (0.830) | 21 (0.510) | 19/246 | NT | 37.0% | coding (346/1134 nt) | ompN | outer membrane porin N |
| ? | NC_000913 | = 1502024 | 37 (0.890) | coding (463/594 nt) | tehB | tellurite methyltransferase | |||||
CAGACCGAAGAAATCAGTATTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATC > NC_000913/1436408‑1436689 | ttgaggctaaaagcatccccgggttggttgccgatatgcaacgttgcactaaacctggtggttacaacctgattgtggcggcgatggataccgctgattatccatgtaccggcggcttcccgtttgccttcaacgagggagaa < 2:537490‑M1/2‑1 (MQ=255)ttgaggctaaaaccatccccgggttgattgccaatatgcaacgttgcactaaacctggtggttacaacctgattgtggcggcgatcgaaaccgctgattatgcatgtaccgtcgggcacccggtcgcctgcaaagggggagaa < 2:674846‑M1/2‑1 (MQ=255)cAGACCGAAGAAATCAGTATTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGG‑CGAGCCTTCGATGTCGTGCATTACGCCATAAt > 1:244825/1‑143 (MQ=255) gcccGAAGAACTCAGTATTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTa < 2:319780/141‑1 (MQ=255) cGAAGAAATCAGTATTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCATAAAGTCGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGt > 1:350508/1‑143 (MQ=255) ctaaaaccatccccgggttgattgccaatatgcaacgttgcactaaacctggtggttacaacctgattgtggcggcgatggataccgctgattagcgatgtaccgtcggcttcccgtttgcgttcaaagagggagAATTACGt > 2:769889‑M1/136‑143 (MQ=255) taaaaccatccccgggttgattgccaatatgcaacgttgcactaaacctggtggttacaacctgattgtggcggcgatggataccgctgattctccctgtaccgtccgcttcccgtttgccttcaaagagggctCATTACGTc < 1:89464‑M1/9‑1 (MQ=255) aagaaATCAGTATTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCCTAAAGTTGTCTGCATTGGTCTAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCGGCCTTCGATGTCGTACCTTCCCCCCTCATTAGGTcc > 2:48336/1‑143 (MQ=255) aagaaATCAGTATTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATCATTACGTcc > 1:527392/1‑143 (MQ=255) aagatcatccccgggttgactgccaatgtgcgacgttgcactgaaccgtgtggtgacaacctgattgtggcggcgatggataccgctgattatccatgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTcc > 2:601571‑M1/134‑143 (MQ=255) cAGTCTTACGCTAAGTCGCGACGCCAGTGGCTCGACCAGTCATAAAGTTGCCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCg < 1:426124/143‑1 (MQ=255) cAGTAGTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCg < 1:426013/143‑1 (MQ=255) tccccgggttgattgccaatatgcaacgttgcactaaacctggtggttacaacctgattgtggcggcgatggataccgctgattatccatgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCg > 2:29082‑M1/127‑143 (MQ=255) aGTATTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGa > 1:503013/1‑143 (MQ=255) gTATTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGaa < 1:546823/143‑1 (MQ=255) tATTACGATAAGTCGCGACGCCATTGGCTCGACAGAAGAAGATGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGaaa < 2:619047/143‑1 (MQ=255) gttgattgccaatatgcaacgttgcactaaacctggttgttacaacctgattgtggcggcgatggataccgctgattatccatgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAAc > 1:424949‑M1/120‑143 (MQ=255) acgcgAATCCATAAGCTCCACCAGGCAGAAAGTTGGCTGCATTGGTATAAGAGGCACCGCCAAATTCATGCAGCATATCGTT‑CCATCCTTCGATTTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCt < 1:615279/142‑1 (MQ=255) aacgttgcactaaacctggtggttacaacctgattgtggcggcgatggataccgctgattatccatgtaccgtcggcttcccgtttgccttcaaagagggggAATTACGTCCGTAAGCGTAAGAACCGTAATCCGCAaattcg < 2:449161‑M1/41‑3 (MQ=255) ttgcactaatcctggtggttacaacctgattgtggcggcgatggataccgctgattatccatgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGcc > 2:19444‑M1/99‑143 (MQ=255) tCGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCgg < 1:150102/143‑1 (MQ=255) cGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCTGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGc < 1:79762/143‑1 (MQ=255) ctaaacctggtggttacagcctgattgtggcggcgatggataccgctgattatccatgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCa < 1:46283‑M1/50‑1 (MQ=255) acccggggggttacaacctgattgtggcggcgatggataccgctgattatccatgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAAt > 1:435283‑M1/91‑143 (MQ=255) ggtaaaaaGTTGTCGGCATGTGTATAAGAGTCAGCGCCAAAGGCAGGCAGCATATCGGT‑CCAGCCTTCGAGGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGc < 2:839136/138‑1 (MQ=255) tCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAGATTTCAGCCCGGCAAATGcc > 1:587594/1‑143 (MQ=255) tCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGcc < 1:134451/143‑1 (MQ=255) tAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCCGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATCATTACGTCCCTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGa > 2:576080/1‑143 (MQ=255) tAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATAGGTACCAG‑CGGCGTGGTGGGACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGa > 2:390559/1‑143 (MQ=255) ttGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGCACCGTAATCTGCAAATTTCAGCCCGGCAAGTGCCAGGCGGGTCCATgtcgg > 1:32888/1‑139 (MQ=255) gTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGCTACATGACTGGtt > 2:466718/1‑143 (MQ=255) gTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCAGGCAAATGCCAGACGGGTACATGACTGGtt > 2:580904/1‑143 (MQ=255) tataAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CAAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCACGCCTGGttt > 1:310996/1‑143 (MQ=255) taAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAACGAACCGTAATCTGCAAACTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGtcgct > 2:735054/1‑139 (MQ=255) taAGAGTCACCGCCAAATGCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGttttt < 1:175739/143‑1 (MQ=255) gcggcgatggataccgctgattatccatgtaccgtcggcttcccgtttgccttcaaagcgggtgAATGACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGttttt > 1:876630‑M1/65‑143 (MQ=255) aaGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGtttttt < 2:731445/143‑1 (MQ=255) aaGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGtttttt < 2:350508/143‑1 (MQ=255) cggcgatggataccgctgattatccatgcaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGtttttt > 1:788412‑M1/64‑143 (MQ=255) agagTCGCCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTg < 2:757042/143‑1 (MQ=255) ccGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGAGCAATGACCGGCATGCTGAAGAtcc > 2:757866/1‑141 (MQ=255) cGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTACTCTGCAAATTTCAGCCCGGCAAATGCCAGCCGGGTCCATGACGCGTTTTTTGACGAttac > 1:110457/1‑141 (MQ=255) ataccgctgattatccatgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTGATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCa > 2:646254‑M1/55‑143 (MQ=255) ccAAATTCAGGCAGCATATCGGT‑CCAGCCTTGGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAgt < 1:356134/143‑1 (MQ=255) accgctgattatccatgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAgt > 2:71886‑M1/53‑143 (MQ=255) accgcggattatccaggtaccgtcggcttcccgtttgcctgcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAgt > 1:115457‑M1/53‑143 (MQ=255) aaTTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGtgtt < 1:793184/143‑1 (MQ=255) tCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTgttgtt < 1:631166/143‑1 (MQ=255) cAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACATCCGTAATCGAAAGAACAGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGttt > 1:311856/1‑143 (MQ=255) cagcaTAGCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCt < 2:94465/143‑1 (MQ=255) tccatgtaccgtcggcgtcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCt > 2:535660‑M1/42‑143 (MQ=255) atgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGaa > 2:46283‑M1/39‑143 (MQ=255) atgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGGTTTTTGAAGATTCAGTGTTGTTTGCCTGaa < 1:18723‑M1/105‑1 (MQ=255) tgtaccgtcggcttcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCtgact < 1:813613‑M1/106‑3 (MQ=255) gccgtcggcttcccgtttgcctccaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATAtt > 1:439036‑M1/35‑143 (MQ=255) accgtcggctgcccgtttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATAtt > 1:50000‑M1/35‑143 (MQ=255) gT‑CCAGCCTCCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTa < 1:729409/143‑1 (MQ=255) gtcaggCCTGCGATGTCGTACATGACGCCATAATTACGTCCGTGAGCGAAAGAACCGTAGTCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTa < 2:267956/138‑1 (MQ=255) gccggcgtcccggttgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTa > 2:847832‑M1/32‑143 (MQ=255) ccTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGACTATTGTATTCCCa > 1:802479/1‑143 (MQ=255) tgccttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGt < 2:350935‑M1/126‑1 (MQ=255) cttcaaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTCGTTTGCCTGACTATTGTATTCCCATTGACCGTAGc < 2:689926‑M1/129‑1 (MQ=255) tACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGCCAGGGTTTTTGAAGAGTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGcc > 1:736235/1‑143 (MQ=255) tACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGcc > 1:812402/1‑143 (MQ=255) aaagagggagAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGt > 1:231709‑M1/11‑143 (MQ=255) tAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATACAGCGTTGTTTGCTTGTATTTTGTATTCCCATTGACCGTAGCCAGTGAGTTGATc < 1:244032/143‑1 (MQ=255) | CAGACCGAAGAAATCAGTATTACGATAAGTCGCGACGCCATTGGCTCGACCAGTCATAAAGTTGTCTGCATTGGTATAAGAGTCACCGCCAAATTCAGGCAGCATATCGGT‑CCAGCCTTCGATGTCGTACATTACGCCATAATTACGTCCGTAATCGAAAGAACCGTAATCTGCAAATTTCAGCCCGGCAAATGCCAGACGGGTCCATGACTGGTTTTTTGAAGATTCAGTGTTGTTTGCCTGAATATTGTATTCCCATTGACCGTAGCCAGTGAGTTGATC > NC_000913/1436408‑1436689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |