| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1436548 = | 37 (0.830) | 21 (0.510) | 19/246 | NT | 37.0% | coding (346/1134 nt) | ompN | outer membrane porin N |
| ? | NC_000913 | = 1502024 | 37 (0.890) | coding (463/594 nt) | tehB | tellurite methyltransferase | |||||
TTGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATGACC > NC_000913/1501884‑1502157 | ttGAGGCTAAAAGCATCCCCGGGTTGGTTGCCGATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGGCGGCTTCCCGTTTGCCTTCAACGAGGGAGaa < 2:537490‑M2/143‑3 (MQ=255)ttGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCAGTTTGCCTTCAAAGAGAGACaa > 2:674830/1‑143 (MQ=255)ttGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATCGAAACCGCTGATTATGCATGTACCGTCGGGCACCCGGTCGCCTGCAAAGGGGGAGaa < 2:674846‑M2/143‑3 (MQ=255) cTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTAGCGATGTACCGTCGGCTTCCCGTTTGCGTTCAAAGAGGGAGaattacgt > 2:769889‑M2/1‑135 (MQ=255) tAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTCTCCCTGTACCGTCCGCTTCCCGTTTGCCTTCAAAGAGGGCTcattacgtc < 1:89464‑M2/143‑10 (MQ=255) aagatcatcccCGGGTTGACTGCCAATGTGCGACGTTGCACTGAACCGTGTGGTGACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtcc > 2:601571‑M2/6‑133 (MQ=255) aaaCCATCCCCGGGTGGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGa < 1:751869/143‑1 (MQ=255) atccATCCCCGGCTTGCTTGCGTATATGCAACGTTGCACTAAACCTGGTGTTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGat < 1:591427/141‑1 (MQ=255) tCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcg > 2:29082‑M2/1‑126 (MQ=255) cccGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACCACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCCAAGAGGGAGAATCACGCCGATATTACGa > 2:447508/1‑143 (MQ=255) cGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCACAGAGGGAGAATTACGTCGATATTACGAAg > 2:331722/1‑143 (MQ=255) gTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTTGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaac > 1:424949‑M2/1‑119 (MQ=255) ttGATTGCCAATATGCAACGTTGCACTAAACCTGGGGGGTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTg < 1:376977/143‑1 (MQ=255) ttGATTGCCAACATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTg < 1:849876/143‑1 (MQ=255) tGATTGCCAATAGGCAACGTTGCAGTAAAGCTGGTGGTTGCAACCTGATTGTGGCGGCGATGGATACCGCTGAGTATCCATGTAGCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTgg < 2:649902/143‑1 (MQ=255) aTTGCCAATATTCAACGTTGCACTAACCCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGTCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGga < 1:458674/143‑1 (MQ=255) cAATCTGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACAGTCGGCTGCCCGTTTGCCTTCAAAGAGGGCGAATTACGTCGATCGTACGAAGGCTGGGAGAggg > 2:748462/1‑143 (MQ=255) atatGCAACGTTGCACTAAACCTGGTGGCTACAACCTGATTGGGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTg < 1:220447/143‑1 (MQ=255) cAACGTGCCGCTAAGCCGGGTGGTCACAACCTGATTGTGGCGGCGATGGGTACCTCCAACCAGCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATa < 1:404783/143‑1 (MQ=255) aaCGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGGGaattacgtccgtaagcgtaagaaccgtaatccgcaaattcg < 2:449161‑M2/143‑42 (MQ=255) aaCGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCCTCGGCTTCCCGTTTGCCTTCGAAGAGGGAGAATTACGTCGCTATTACGACGGCTGGGAGGGGGTGAACTAc > 1:555140/1‑143 (MQ=255) cGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGCATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACaa < 1:556006/143‑1 (MQ=255) gTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAAt < 1:739151/143‑1 (MQ=255) ttGCACTAATCCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcc > 2:19444‑M2/1‑98 (MQ=255) ttGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCGTCCCGTTTGCCTTCAAAGCCGGAGAATGACGACGATAGTACGACGGCCGGGAGGCGGGGaaagcaaatg > 2:101895/1‑136 (MQ=255) cTAAACCTGGTGGTTACAGCCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggca < 1:46283‑M2/143‑51 (MQ=255) tAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCGTTCAAAGAGGGAGAATTACGTCGATATTACGACGGCTGGGAGGGGGGGAAAGACAATGAAGACg > 2:765534/1‑143 (MQ=255) acccggGGGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaat > 1:435283‑M2/3‑90 (MQ=255) gtggtTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCACGTTTGCCTTCAAAGAGGGAGAATCACGTCGATATTAAGAAGGCTGGGAGAGGGGGAAATACAATGACGAAGTCgaggag > 2:841321/1‑138 (MQ=255) tACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTgca < 1:829710/143‑1 (MQ=255) gaccaCCTGCTTGTGGCGGCGATGGATCCCGCTGCTTATCCATGTACCGTCGGCTTCCCGTTTGCCTGCAAAGAGGGAGAATTCTGTCGAGATTACTAATGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTgca < 1:203592/139‑1 (MQ=255) ccTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTgcaccgca < 1:573037/143‑1 (MQ=255) cggATTGTGGCGGCGAGGGATACCGCTGAGTATCCATGTACCGTCGGCTTCCCGTGTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTgcaccgcac < 2:201676/141‑1 (MQ=255) tgcttGTGGCGGCGATGGACACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGCGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTgcaccgcacc < 2:424945/140‑1 (MQ=255) gcggcgATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGCGGGTGaatgacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttt > 1:876630‑M2/1‑64 (MQ=255) cggcgATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAAc > 2:243679/1‑143 (MQ=255) cggcgATGGATACCGCTGATTATCCATGCACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggtttttt > 1:788412‑M2/1‑63 (MQ=255) gggtagcGCTGATTATCCATGTACCGTCGGGTTCCTGTTAGAATAAAATGATAGAGAATTACGTCGATATTACGAAGGCGGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATc < 2:660152/137‑1 (MQ=255) ggATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGCGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGGGAAATACGATGAAGACGTAGGCGAGCTGAACCGCACCGACGCCACCGGTAATc > 2:797213/1‑143 (MQ=255) gATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGCTATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCg > 1:406945/1‑143 (MQ=255) gATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCg < 1:336668/143‑1 (MQ=255) aTACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtgatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattca > 2:646254‑M2/1‑54 (MQ=255) tACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTa > 1:364670/1‑143 (MQ=255) aCCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagt > 2:71886‑M2/1‑52 (MQ=255) aCCGCGGATTATCCAGGTACCGTCGGCTTCCCGTTTGCCTGCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagt > 1:115457‑M2/1‑52 (MQ=255) tATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCg > 1:734094/1‑143 (MQ=255) tCCATGTACCGTCGGCGTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcct > 2:535660‑M2/1‑41 (MQ=255) ccATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGcctgt > 2:327463/1‑139 (MQ=255) aTGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaa > 2:46283‑M2/1‑38 (MQ=255) aTGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactgggtttttgaagattcagtgttgtttgcctgaa < 1:18723‑M2/143‑106 (MQ=255) aTGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCACCGGTAATCGTATTAAACTGCGTTTCg > 2:779511/1‑143 (MQ=255) tGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgact < 1:813613‑M2/143‑107 (MQ=255) gccgTCGGCTTCCCGTTTGCCTCCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatatt > 1:439036‑M2/2‑34 (MQ=255) aCCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACAGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCAc > 2:681269/1‑143 (MQ=255) aCCGTCGGCTGCCCGTTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatatt > 1:50000‑M2/1‑34 (MQ=255) cGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGAAGAGGGTGAAATACAATGAAGACGCAGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTGTCGCCACGa > 2:434695/1‑143 (MQ=255) gccggCGTCCCGGTTGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgta > 2:847832‑M2/3‑31 (MQ=255) gTCGGCTTCCCGTTTGCCTTCAAAGAAGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACAGACGCCAACGGTAATGGTATTAAACTGCGTTTCGCCACGAt > 2:148544/1‑143 (MQ=255) tGCCTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgt < 2:350935‑M2/143‑127 (MQ=255) gCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGAGTGAAATACAATGAAGACGTCGGCGAGCTGAACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCAACGATGCTGGCACGTaaaaa > 1:841985/1‑143 (MQ=255) cTTCAAAGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgtcgtttgcctgactattgtattcccattgaccgtagc < 2:689926‑M2/143‑130 (MQ=255) ttCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATg < 1:857723/143‑1 (MQ=255) ttCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGAGTTTCGCCACGATGCTGGCACGTAAAAAATg > 1:122941/1‑143 (MQ=255) tCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATGa < 1:425794/143‑1 (MQ=255) aaaGAGGGAGaattacgtccgtaatcgaaagaaccgtaatctgcaaatttcagcccggcaaatgccagacgggtccatgactggttttttgaagattcagtgttgtttgcctgaatattgtattcccattgaccgtagccagt > 1:231709‑M2/1‑10 (MQ=255) aaaGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAACTGAcc > 1:806276/1‑143 (MQ=255) | TTGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATGACC > NC_000913/1501884‑1502157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |