| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,391,775 | IS1 (+) +9 bp | coding (1259‑1267/1530 nt) | nuoM ← | NADH:quinone oxidoreductase subunit M |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 37 (1.030) | 31/282 | 0.1 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 2391783 | 0 (0.000) | coding (1259/1530 nt) | nuoM | NADH:quinone oxidoreductase subunit M | |||||
| * | ? | NC_000913 | 2391775 = | 0 (0.000) | 29 (0.810) | 25/282 | 0.4 | 100% | coding (1267/1530 nt) | nuoM | NADH:quinone oxidoreductase subunit M |
| ? | NC_000913 | = 3584195 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979134‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCTGCGTGAGCTGTTTA < NC_000913/2391783‑2391643 GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGTGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACCAAATCAGTAAGTTGGCCGCATCCCCTGATgc > 1:140189/1‑141 TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCTGATTACCGTTATCTCTACCT > 1:115410/1‑143 TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTCCCGGCATCTCTCCCTT > 2:350865/1‑143 cccgACCCCGTCAGTAGCTGAACAGGCGCGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTT < 2:26454/139‑1 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCTGATCACCGCACTCTCTACCCTTGGACTGGTCTct > 2:57327/1‑141 AGCTGAACAGGAGGGACAGCTGATAGAAACAGACGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTC < 2:122460/143‑1 AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTC < 1:239900/143‑1 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTG < 1:219617/143‑1 AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGT < 2:401936/143‑1 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GC > 1:437940/1‑143 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCGGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTATGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCG > 2:88812/1‑143 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTTGCGCTGTTACATC‑GCG > 2:169911/1‑143 ATACAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCT < 2:601670/143‑1 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACT > 1:137039/1‑143 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACT > 2:41035/1‑143 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTC > 2:116737/1‑143 CAGAGGCCACTGGTGGACCGCAACTACACCATCATACACCAAATCAGNAGGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGTCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACTTC‑GCGCTTACTTCG < 2:140189/143‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTAGCGATGTTACATC‑GCGCTTACTTCG < 1:387335/143‑1 AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGG < 1:247314/143‑1 GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGT > 2:457931/1‑143 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAA < 1:95428/143‑1 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCCTACTTCGGTcacg > 2:411989/1‑139 CACTTGAGCCCCTCAAAAACACCATCATACACTAAATTAGTAAGTTGGCAACATCACCTGATTACCGTTATCTTTACCTTTGGGCTGGTCTTTGCATTTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGC < 1:604536/143‑1 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCG < 1:568380/143‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCGAAAAGCCAGA > 1:442329/1‑143 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTAGGTAAAGCGAAAAGCCAGATTG > 1:472040/1‑143 agCACCATCATCCCCGAAACCAGTAAGTTGGCAGCATCACCGGATTACCGTTATCTCTACCTTTGGGCTGTTCTCTGCATCTGCTTATTCGCTGGCGATGTTACATC‑GCGCTTACTGCGGTAAAGCGAAAAGCCAGATTGCCA < 1:213730/141‑1 ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCGAACAGCCAGACTGCCAG > 2:334695/1‑143 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTA‑ATCTGTGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCC > 2:289632/1‑143 ccattcTACGCTAAATCGGTAATTTTGCAGCATCTCCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTGTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCGGAAAGCCAGATTGCCAGCCA < 2:349045/137‑1 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCA < 2:449842/143‑1 ACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCGTACTTCGGTAAAGCGAAAAGCCAGATAGCCAGCCAGCAACTGCC > 2:196436/1‑143 TAAGTCGGCAGCATCACCTGATTACCGTTAGCTCTACCTTTGGGCTGGTCGTTGCATCTGTTGATTCGCTGGCGATGTTACATC‑GCGCTTACTCCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCG < 1:186124/143‑1 TTGGCCGCTTCACCTGTTTACCGTTATCTCTACCTTTGGGTTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCTGC < 2:188342/143‑1 GGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCTGCGT < 1:116737/143‑1 GGCAGCACCTCATGATGACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAACGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCTGCGT < 1:183108/143‑1 CCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCTGCGTGAGCTGTTTA < 1:450718/143‑1 GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979134‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATC‑GCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCTGCGTGAGCTGTTTA < NC_000913/2391783‑2391643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |