New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 219162845 (0.960)3 (0.070) 3/252 NT 6.5% coding (18/720 nt) yehC putative fimbrial chaperone YehC
?NC_000913 = 2191637 43 (0.960)coding (9/720 nt) yehC putative fimbrial chaperone YehC

CATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGTTTCAGGTATTTTGCTTTAAAC  >  NC_000913/2191490‑2191770
                                                                                                                                          |                                                                                                                                              
cgtCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGGAGATAACAATGCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATg                                                                                                                                            <  2:224770/141‑1 (MQ=255)
cATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATg                                                                                                                                            >  1:127641/1‑143 (MQ=255)
 ttttcttcttTCCATTCTGCCGGGTTAACAATCCCCGTCCCGTAGATATCACTTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATgg                                                                                                                                           <  2:884571/139‑1 (MQ=255)
  tCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCCTGTGCAGGAAGGACCATAGAAAAAATGAGTCAAGATCATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGACCGCCATggg                                                                                                                                          >  1:743789/1‑143 (MQ=255)
   cACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGGGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGa                                                                                                                                         >  1:661563/1‑143 (MQ=255)
      ttcttTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAg                                                                                                                                      <  2:255209‑M2/143‑2 (MQ=255)
      gtcttTATTTTCTGCCGGGTAAATAATGCGCGTCCCGGAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAAGAAGCCTTTCATTTGAATGCCTCTTAAATTAAAAGACCGCCATTGGagag                                                                                                                                      >  2:439068/2‑143 (MQ=255)
       tcttTATTTTCTGCCGGGTAAATAATGCGCGTCCTTTAGATAACAATTCCGGCATGTGCAGGAAAGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAgc                                                                                                                                     >  2:738648‑M2/1‑141 (MQ=255)
         tttATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCAGCCATGGGATAgcgg                                                                                                                                   <  1:553645‑M2/143‑5 (MQ=255)
         tttATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTACACGGAGGACCATCGAAAAAAGTAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAgcgg                                                                                                                                   <  1:425189‑M2/143‑5 (MQ=255)
          ttATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAACAGGCCCCCATGGGGTGgcggc                                                                                                                                  <  1:567781‑M2/143‑6 (MQ=255)
          ttATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAgcggc                                                                                                                                  >  1:893940‑M2/1‑138 (MQ=255)
          ttATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAgcggc                                                                                                                                  <  1:595226‑M2/143‑6 (MQ=255)
             atttCTGCCGGGTAAATAATGCGCGCCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCAt                                                                                                                               <  2:613614/142‑1 (MQ=255)
              tttCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCCCCATGGAATAGCGGCCATg                                                                                                                              >  2:94241/1‑143 (MQ=255)
                       ggTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTCTTAcc                                                                                                                     >  2:623793/1‑143 (MQ=255)
                               atGCGCGTCCCGTAGATAAGAATTCTGGCAGGTGCAGGAAGGACCATTGCCAAAATGAGTACAGATAACTGCCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGaaa                                                                                                             <  2:649824/143‑1 (MQ=255)
                                tGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAAc                                                                                                            <  1:318027/143‑1 (MQ=255)
                                 gcgcGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCGTGTTTATTACCTGGAGAAACt                                                                                                           >  1:841418/1‑143 (MQ=255)
                                   gcgTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTa                                                                                                         <  1:305557/143‑1 (MQ=255)
                                        ccGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCtatcccatggcggccttttaatttaagaggcattaaaatgaaag                                                                                                    <  1:725984‑M1/143‑45 (MQ=255)
                                             ggtAACATTTCCGGCATTCTCACGAATGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATTGCTCTTAAATTAATAGGCCGCTGTTTTATTTTGGCCATGTTTATTACCTGGAGAAACTTACAATtttatt                                                                                               <  2:196898/141‑1 (MQ=255)
                                             gATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATtttatt                                                                                               <  1:579458/143‑1 (MQ=255)
                                             gATAACAACTCCCCCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAATAGGTCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATtttatt                                                                                               <  1:579279/143‑1 (MQ=255)
                                               tAACAATTCCGGCATGTGCAGGAATGACCATAGAAAAAATGAGTAACGATAATAGGCCTTTCATTTTAATGCCTCTTAAATTCAAAGGCCTCCACGGGATTGCGGCCATGTTTATTACCTGGAGAAACTTACAATtttattta                                                                                             <  2:599610/143‑1 (MQ=255)
                                                aaCAAGTCCGGCATGTACAAGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTttatttat                                                                                            <  2:675776/143‑1 (MQ=255)
                                                    aTTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGACCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAAt                                                                                        >  2:663494/1‑143 (MQ=255)
                                                         ggCATGTGCAGGAAGGACCATAGAAAAAATGGGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTgc                                                                                   <  2:661563/143‑1 (MQ=255)
                                                              gtgCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCcac                                                                              <  1:518315/143‑1 (MQ=255)
                                                               tgCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCcaca                                                                             >  1:37934/1‑143 (MQ=255)
                                                                 cAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCATACg                                                                           >  1:104640/1‑143 (MQ=255)
                                                                   ggaaggaCCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTCATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCa                                                                         >  2:100077/1‑143 (MQ=255)
                                                                           taTAGAAAAAATGAGTGAAGATAATAATCCTCTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCaga                                                                 <  2:727007/142‑1 (MQ=255)
                                                                            aTAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATACCTCTTAAATTAAAAGGCCGCCATGGAAAAACAACCATTTTTATTAACTGAAAAAACTTACAATAATATTTATTAATACTGCTCCACACGCATAACAagaa                                                                >  2:498064/1‑142 (MQ=255)
                                                                               gAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCAGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCAGCGCCACACGCATAACCAGagaag                                                             >  2:908350/1‑143 (MQ=255)
                                                                                aaaaaaTGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGcgaaga                                                            >  1:116707/1‑143 (MQ=255)
                                                                                aaaaaaTGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGAATAACCAGagaaga                                                            >  2:355079/1‑143 (MQ=255)
                                                                                 aaaaaTGAGTAAAGATAATACCCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGAt                                                           <  1:524233/143‑1 (MQ=255)
                                                                                        aGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACAt                                                    <  1:67669/143‑1 (MQ=255)
                                                                                        aGTAAAGATAATAATCCTGGCATGTTAATGGCGCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACAt                                                    <  1:218247/143‑1 (MQ=255)
                                                                                         gTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGAAATGATTATTTCCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATc                                                   >  1:129162/1‑143 (MQ=255)
                                                                                          tAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCtatcccatggcggccttttaatttaagaggcattaaaatgaaaggattattatcttta                                                                                      <  1:683046‑M1/107‑59 (MQ=255)
                                                                                          tAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCtatcccatggcggccttttaatttaagaggcattaaaatgaaaggattattatcttta                                                                                      >  2:683046‑M1/1‑49 (MQ=255)
                                                                                          tAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAgcggccttttaatttaagaggcattaaaatgaaaggattattatcttta                                                                                      <  1:683046‑M2/107‑50 (MQ=255)
                                                                                          tAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAgcggccttttaatttaagaggcattaaaatgaaaggattattatcttta                                                                                      >  2:683046‑M2/1‑58 (MQ=255)
                                                                                             aGATAATGTTCCTTTCATTTTAATGCCTCTTCTTTGATAATGTCTCCATTGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCt                                               <  2:889222/143‑1 (MQ=255)
                                                                                                taataaTCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGAt                                            >  1:111895/1‑143 (MQ=255)
                                                                                                 aataatCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGAtt                                           <  1:590527/143‑1 (MQ=255)
                                                                                                 aataatCCTTTCATTTTAATGCCTCTTAAATTAAAAAGCCGCCATGGGATAGCGGCCATGATTATAACGTTGAGACACTTAAAATTTTATTTATTAATCATGCGCAACACGCACAACCAAAGAAACAAACACATCAcaagaat                                           >  2:693162/1‑137 (MQ=255)
                                                                                                      tCCTTTCATTTTAATGCCTCTTAAGTTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACt                                      >  2:493911/1‑143 (MQ=255)
                                                                                                        cTTTCGTGTTAAAGCCTCGTGAATGATTAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGa                                    <  2:100962/143‑1 (MQ=255)
                                                                                                        cTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAgcggccttttaatttaagaggcattaaaatgaaaggattattatctttactcattttttctatggtccttcctgcacatgccggaattgttatctacgg                                    <  1:725984‑M2/143‑100 (MQ=255)
                                                                                                        cTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGa                                    <  1:806677/143‑1 (MQ=255)
                                                                                                         tttCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAg                                   >  2:205454/1‑143 (MQ=255)
                                                                                                         tttCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAg                                   >  2:822455/1‑143 (MQ=255)
                                                                                                          ttCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACGGAGt                                  >  2:565178/1‑143 (MQ=255)
                                                                                                           tCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGtt                                 >  2:703454/1‑143 (MQ=255)
                                                                                                             aTTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGATTATTACCTGGAGAAGAGTACAATTTTATTTAGTAATCGTGCGCCACACGCCTAACCAGCGAAGATAACACATCACCTGACTGAGCTGCGttcg                               >  2:847803/1‑141 (MQ=255)
                                                                                                                          ttaaattaaaAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGTTTCAg                  >  1:351491/1‑143 (MQ=255)
                                                                                                                          ttaaattaaaAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGTTTCAg                  <  2:660342/143‑1 (MQ=255)
                                                                                                                             aattaaaAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGTTTCAGGTa               >  1:63435/1‑143 (MQ=255)
                                                                                                                                      gccgccaccccatgggggcctgttaatttaagaggcattaaaatgaaaggattattatctttactcattttttctatggtccttcctgcacatgccggaattgttatctacgggacgcgcattatttacccggcagaaaataa      <  1:567781‑M1/143‑139 (MQ=255)
                                                                                                                                      gCCGCtatcccatggcggccttttaatttaagaggcattaaaatgaaaggattattatctttactcattttttctatggtccttcctgcacatgccggaattgttatctacgggacgcgcattatttacccggcagaaaataa      >  1:893940‑M1/1‑5 (MQ=255)
                                                                                                                                      gCCGCtatcccatggcggccttttaatttaagaggcattaaaatgaaaggattattatctttactcattttttctatggtccttcctgcacatgccggaattgttatctacgggacgcgcattatttacccggcagaaaataa      <  1:595226‑M1/143‑139 (MQ=255)
                                                                                                                                       ccGCtatcccatggctgccttttaatttaagaggcattaaaatgaaaggattattatctttactcattttttctatggtccttcctgcacatgccggaattgttatctacgggacgcgcattatttacccggcagaaaataaa     <  1:553645‑M1/143‑140 (MQ=255)
                                                                                                                                       ccGCtatcccatggcggccttttaatttaagaggcattaaaatgaaaggattattatctttactacttttttcgatggtcctccgtgtacatgccggaattgttatctacgggacgcgcattatttacccggcagaaaataaa     <  1:425189‑M1/143‑140 (MQ=255)
                                                                                                                                         gccATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGTTTCAGGTATTTTGCTTTaaa   <  2:111895/143‑1 (MQ=255)
                                                                                                                                         gCtatcccatggcggccttttaatttaagaggcattaaaatgaaaggattattatctttactcattttttctatggtctttcctgcacatgccggaattgttatctaaaggacgcgcattatttacccggcagaaaataaaga   >  2:738648‑M1/1‑2 (MQ=255)
                                                                                                                                          ctatcccatggcggccttttaatttaagaggcattaaaatgaaaggattattatctttactcattttttctatggtccttcctgcacatgccggaattgttatctacgggacgcgcattatttacccggcagaaaataaagaa  <  2:255209‑M1/143‑143 (MQ=255)
                                                                                                                                          ccATTGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTAAGATTCAGGTATTTTGCTTTAAAc  <  2:558818/143‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                              
CATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGTTTCAGGTATTTTGCTTTAAAC  >  NC_000913/2191490‑2191770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.