| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2726026 = | 52 (1.110) | 3 (0.060) +A |
3/262 | NT | 5.3% | intergenic (‑280/+43) | kgtP/rrfG | alpha‑ketoglutarate:H(+) symporter/5S ribosomal RNA |
| ? | NC_000913 | = 4171761 | 57 (1.220) | intergenic (+5/‑296) | rrfB/murB | 5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase | |||||
TGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGG > NC_000913/2725885‑2726163 | tGAGGAGCTTACGGATACATTTCTCGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAAt < 1:128013/143‑1 (MQ=255)tGAGGAGCTTAAGGACAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATCAGAAGCGCACCGTCGCATCAGGCATTTTTTTCTGCGCCAAt < 1:919665/143‑1 (MQ=255) gaggagCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATg > 2:885975/1‑143 (MQ=255) ataaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaattacag < 2:640668‑M1/4‑4 (MQ=255) gagCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCaa > 2:903689/1‑143 (MQ=255) gaatcagaagctgcctggcggcaggagcgcggtggtcccacctgtccctccgccgatctcagaagtgagtcgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaattAtgcga > 2:319295‑M1/138‑141 (MQ=255) ctcaaGGCTAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCaaaaa < 1:728100/140‑1 (MQ=255) ttAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTCTCCGCGCCGCTGCcaaaac > 1:839853/1‑142 (MQ=39) aaGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGc > 2:180376/1‑143 (MQ=255) gATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCAt > 2:264973/1‑143 (MQ=255) tAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTNGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAggaaataa > 1:807983/1‑137 (MQ=255) tAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCACAAAGGCCATcc > 1:486488/1‑143 (MQ=255) tAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGACATTTTTGCCTGCGCCAACCCAACAAGAcccacc > 2:861001/1‑139 (MQ=38) aaaTTTCTGGTAAGGAGGACACGTATGGCAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGAGCCAATGCAAAAAGGCCATCCg > 2:833243/1‑143 (MQ=255) aaaTTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGCGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTGTTTCTGCGCCAATGCACACAGGCCATACg > 2:779452/1‑143 (MQ=255) aTTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCATCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTc > 1:767485/1‑143 (MQ=255) ttCTGGTAAGGAGGACACGTATGGCAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGCATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTCTCTGCGCCACTGCAAAAAGGCCATCCGTccg > 2:882667/1‑141 (MQ=255) cTGGTAAGGAGGACCCGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGa < 1:317848/143‑1 (MQ=255) tGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCGATGCAAAAAGGCCAGCCGTCAGGAt > 1:401548/1‑143 (MQ=255) cgcagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaattATGCGAAA‑GGCCATCCGTCAGGATGGcc > 1:763417‑M1/116‑143 (MQ=255) aggaggCCACGTAGGGAAGTGGGCAAGTGGGGGAAGCCGCATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCt < 1:135017/143‑1 (MQ=255) ggaggaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGGGTATAAGACGCGCAGCGTCGCGTCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGAGGGCCtt > 1:600534/1‑143 (MQ=255) aggaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTAGGTGGTTAGGCCTCTCAGTGTAGGGGGCGTCAGGTGGGTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTc < 1:915358/143‑1 (MQ=16) aggaAACGGATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTc < 1:670809/143‑1 (MQ=255) gaCACGTATGGCAGTCGGCAAGTGGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGc < 1:365540/143‑1 (MQ=255) gaCACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGGGGGAGTATACGACGCGCAGCGTCGCATCAGGCATTTTTGTCTGCGCCACTGCAAAAACGCCCTCCGCCCGGATCGCCCTgcgc > 2:632805/1‑143 (MQ=255) acGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCAACACTCGGGATGCCCTCTCACATa > 2:631343/1‑143 (MQ=37) gggccgaccggaccccatgccgaacgcagaagtgaaacgcggtagcgccgatggtagtgtggggtctccccatgcgagaggagggaactgccaggcatcaaattATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATaa > 2:272196‑M1/105‑143 (MQ=255) gTATGGAAGTGGGCAAGTTGGGGAAGCCGTATACGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCATTTCGCATAAt > 1:73797/1‑143 (MQ=255) ggAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGa < 2:499210/143‑1 (MQ=255) ggAAGTGGGCAAGTTGGGGAAGCCGGATCCGTTGCTGAATCTGGCAGATGTGGGAGTATAAGACGCGCAGCGCCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGa < 2:875910/143‑1 (MQ=255) cctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaattATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATg > 1:51604‑M1/98‑143 (MQ=255) gggCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGCGTCTTGGATATACAGCTTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTg < 1:911264/143‑1 (MQ=21) gggCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTg < 1:775619/143‑1 (MQ=255) ggCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTgg < 2:579588/143‑1 (MQ=255) cAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCCATGCAAAAACGCCATCCGTCAGGATGGCCTTTCGCATAATTGGATGCCGGGCa > 2:879344/1‑143 (MQ=255) gTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCATTCGCATAATTGGAGGCCTGGCAGtt > 2:100950/1‑143 (MQ=255) gggAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTCCCCt > 2:414094/1‑143 (MQ=255) cGTATCCGCTTCTTAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCg < 2:1063/143‑1 (MQ=255) tGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAGAAAGGCCAGCCGTCAGGATGGCCTTTCGCATAATTTGATGCTTGGCAGTTCCCGACTCTCGCATgggggggcc > 2:348530/1‑138 (MQ=21) tGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGccc > 2:464412/1‑143 (MQ=255) aaTCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGCGCcccc > 1:704571/1‑143 (MQ=255) tCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTTTTCTTCATTGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATCATTTGATGCCTGGCAGTTCCCTCCTCTCTCATGGGGAGAccccgc > 2:755892/1‑141 (MQ=25) cTGGCATGTGTGTGGCTATAACGCGCGTAGCGTCGCCTCCGGCATTTTTTTCTGCGCCAATGCAAACCGGCCATCCGTCAGGATGGCCTTTGGCATAAACTATCGTGTTGCTGTGCCCTACTCTCGCATGGGGAGACCCcaca < 2:410229/143‑1 (MQ=12) ggCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACt > 1:717223/1‑143 (MQ=255) gtgcaaGACGGGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCAGAATTCGAGGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTa < 1:52349/139‑1 (MQ=25) agaaGACGCGCAGCGTCGCATCAGGCATCTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACg < 1:849418/141‑1 (MQ=255) aaGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGc > 2:792312/1‑143 (MQ=255) aGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGACAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGAAGTTCTGTACTCTCGCATGGGGTGACCGCACACTACCAACTGCGTTACGGCg > 1:868495/1‑143 (MQ=21) cgcAGCGTCGCATCAGGCACTTTTTGCTGCGCCAATGCAAACAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTCGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCa < 1:797512/143‑1 (MQ=255) tCGCATCAGGCACTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa < 1:317377/143‑1 (MQ=255) cATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCGCTTCTGAGtt > 1:787611/1‑143 (MQ=255) aTCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTc > 1:483123/1‑143 (MQ=255) tCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCg > 2:727972/1‑143 (MQ=255) cAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCgg < 1:53005/143‑1 (MQ=255) ttttttttCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg < 1:375107/142‑1 (MQ=255) tttttttCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACCGCGTTTCACCTCTGAGTTCGGCATggg > 2:489653/1‑143 (MQ=255) ttttttCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgggg < 1:162736/143‑1 (MQ=255) ttCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCCCTTCTGATTTCGGCATGGGGTCAg > 2:49926/1‑143 (MQ=255) tCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTCTCACTTCTGCGCTCGGCATGGGGTCAgg > 2:743182/1‑143 (MQ=255) cgcCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCGGAGTCCGGCATGGGGGCAGGTggg > 2:605946/1‑143 (MQ=255) | TGAGGAGCTTAAGGATAAATTTCTGGTAAGGAGGACACGTATGGAAGTGGGCAAGTTGGGGAAGCCGTATCCGTTGCTGAATCTGGCATATGTGGGAGTATAAGACGCGCAGCGTCGCATCAGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCGTCAGGATGGCCTTTCGCATAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGG > NC_000913/2725885‑2726163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |