New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2726026 =52 (1.110)3 (0.060)
+A
3/262 NT 5.3% intergenic (‑280/+43) kgtP/rrfG alpha‑ketoglutarate:H(+) symporter/5S ribosomal RNA
?NC_000913 = 4171761 57 (1.220)intergenic (+5/‑296) rrfB/murB 5S ribosomal RNA/UDP‑N‑acetylenolpyruvoylglucosamine reductase

TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGA  >  NC_000913/4171620‑4171900
                                                                                                                                             |                                                                                                                                           
tCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATa                                                                                                                                            >  2:911781/1‑143 (MQ=11)
tCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCAGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATa                                                                                                                                            <  1:745143/143‑1 (MQ=11)
 cggATAAAACGGAATTTGCCTGGCGGCAGTAGCGCGGTTGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaa                                                                                                                                           <  1:375722/141‑1 (MQ=9)
   gATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaa                                                                                                                                         <  1:5444/143‑1 (MQ=32)
    aTAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATtacag                                                                                                                                        <  2:640668‑M2/143‑6 (MQ=255)
      gaatcAGAAGCTGCCTGGCGGCAGGAGCGCGGTGGTCCCACCTGTCCCTCCGCCGATCTCAGAAGTGAGTCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATtatgcga                                                                                                                                      >  2:319295‑M2/2‑136 (MQ=255)
       aaaCAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGACATCAAATAAAACaaa                                                                                                                                     >  2:640702/1‑143 (MQ=2)
       aaaCAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGaa                                                                                                                                     <  1:173041/143‑1 (MQ=32)
          cAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGCGTAGGGAACGGCCAGGCATCAAGTAAACCGAGAgg                                                                                                                                  >  2:239521/1‑143 (MQ=11)
          cAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAgg                                                                                                                                  <  1:162367/143‑1 (MQ=32)
              aTTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCa                                                                                                                              <  1:27371/143‑1 (MQ=32)
              aTTTGCCAGGCGGCAGCACCGCGGCGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCa                                                                                                                              <  1:812189/143‑1 (MQ=255)
                     tGGCGGCAGTAGCGCGGTGATGGCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGaaa                                                                                                                       <  1:616195/143‑1 (MQ=255)
                           cAGTAGCGCGGTGGTCGCACCTGGCCCCATGGCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTgg                                                                                                                 <  2:183087/143‑1 (MQ=255)
                            cgcagcgCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATtatgcgaaaggccatccgtcaggatggcc                                                                                                                >  1:763417‑M2/4‑114 (MQ=255)
                              tAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGcc                                                                                                              >  1:161395/1‑143 (MQ=35)
                                 cgcgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCatt                                                                                                           >  1:900756/1‑143 (MQ=21)
                                  gcgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGGGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAACTAAAACGACAGGCTCAGTCGACAGACTGGGCCTTTc                                                                                                          >  1:149862/1‑143 (MQ=255)
                                     gtggtCCCACGTGGCCGCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGtt                                                                                                       <  2:626901/143‑1 (MQ=255)
                                     gtggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGtt                                                                                                       >  2:585573/1‑143 (MQ=34)
                                       ggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTa                                                                                                    <  1:741107/143‑1 (MQ=25)
                                       gggCCGACCGGACCCCATGCCGAACGCAGAAGTGAAACGCGGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGGAGGGAACTGCCAGGCATCAAATtatgcaaaaaggccatccgtcaggatggcctttcgcataa                                                                                                     >  2:272196‑M2/1‑103 (MQ=255)
                                        gtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGttctc                                                                                                    >  2:720446/1‑140 (MQ=21)
                                        gtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTa                                                                                                    >  1:574380/1‑143 (MQ=35)
                                        gtCCCACCTGACCCCAGGCCGAACTGAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTa                                                                                                    <  2:343971/143‑1 (MQ=25)
                                           ccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCt                                                                                                 >  1:528622/1‑143 (MQ=35)
                                           ccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCt                                                                                                 <  1:70591/143‑1 (MQ=35)
                                           ccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGGGTGGGGCCTCCCCATGCGAGAGGAGGGAACTGCCAGGCAGAAAATAAAACGAAGGGCTCAGTCGAAGGACTGGGCCTTTCGgtttcact                                                                                                 >  2:90295/1‑139 (MQ=11)
                                             tccTGACCCCTTGCCCAACTCAGAAGGGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATCCGAGAGTAGGGATATGCCAGGCATCAAATAAAACGAAAGGCTCAGTCTTTCGACTGAGCCTTTCGTTTTATTtga                                                                                               <  1:157939/142‑2 (MQ=11)
                                              ccTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATtatgcaaaaaggccatccgtcaggatggcctttcgcataatttgatg                                                                                              >  1:51604‑M2/1‑96 (MQ=255)
                                               cTGACCCCATGGCGAACTCAGAAGTGAATCGCCGTAGCGCGGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCtgttg                                                                                             <  2:203076/143‑1 (MQ=255)
                                                    cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTg                                                                                                                  <  1:779637/117‑1 (MQ=38)
                                                    cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTg                                                                                                                  >  2:779637/1‑117 (MQ=38)
                                                      cacgCCGAACTCAGCAGTGACACGCCGTAGCGCCGATGGTAGTGTGGGGTGTACCCATGCGAGAGTAGGGAAATGCCAGGCATCACATAAAAAGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATATGTTGTTTGTCg                                                                                      <  1:654323/140‑1 (MQ=11)
                                                      cATGCCGAACTCAGAAGTGAAACGCCGTAGCGGCGAGGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCg                                                                                      <  1:794367/143‑1 (MQ=21)
                                                      cATGCCGAACTCAGAAGCGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCg                                                                                      <  1:676825/143‑1 (MQ=25)
                                                         gCCGAACTGAGCAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGCCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTg                                                                                   <  2:320521/143‑1 (MQ=255)
                                                           cGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTACCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGaa                                                                                 >  1:433237/1‑143 (MQ=25)
                                                            gAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAAc                                                                                >  1:744204/1‑143 (MQ=35)
                                                                      gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGCGCAGTCAACGTCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGa                                                                      <  1:208275/143‑1 (MQ=11)
                                                                         aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCGCTCCTGAGTa                                                                   <  1:725005/143‑1 (MQ=25)
                                                                         aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGAAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTCTCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTa                                                                   >  2:613290/1‑143 (MQ=25)
                                                                            cGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGa                                                                <  1:329432/143‑1 (MQ=35)
                                                                                  cgcgcAGGTGGTAGGGTGGGGTCTCCCAATGCGAGAGTAGGGAACTGACAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATc                                                          <  1:2797/142‑1 (MQ=11)
                                                                                      ccGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATccgcc                                                      <  1:899427/143‑1 (MQ=34)
                                                                                                 gtgGGCTCCCCCCATGCGAGAGCAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCCGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGCGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAtt                                           <  2:360742/143‑1 (MQ=11)
                                                                                                 ggcgggTCGCCCCGTGCGAGAGTAGGGAACGGCCCGGCATCCAGTACAGCGGATGGCTCAGTCGAAAGACTGGGCCTTGCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAtt                                           <  2:340558/140‑1 (MQ=11)
                                                                                                  tgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAttt                                          >  1:302614/1‑143 (MQ=35)
                                                                                                   ggggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCAACTAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGCGTAGGACAAATCCGCCGGGAGCGGATTTg                                         >  1:389451/1‑143 (MQ=255)
                                                                                                     tgTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGaa                                       <  1:160303/142‑1 (MQ=25)
                                                                                                     ggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGCGTCGGGTGAATCCTCCGGGCGCGGacggcga                                       >  1:663157/1‑137 (MQ=11)
                                                                                                      gTCTCGCCATGCGAGAGTAGGGAACTGTCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTGCGTTTTATCGGTTGTTTGGCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAAc                                      <  1:318157/143‑1 (MQ=11)
                                                                                                          ccccATGCGAGCGTAGGGAACCGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTg                                  <  2:18925/143‑1 (MQ=21)
                                                                                                          ccccATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTg                                  <  1:55885/143‑1 (MQ=35)
                                                                                                           cccATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACACATCCGCCGGGAGCGGATTTGAACGTTGc                                 >  2:594058/1‑143 (MQ=21)
                                                                                                           cccATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAATTGAACGTTGc                                 >  2:308819/1‑143 (MQ=21)
                                                                                                           cccATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCAGCCGGGAGCGGATTTGGACGttac                                 >  2:441276/1‑141 (MQ=16)
                                                                                                                   agagTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGCGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAc                         >  2:452526/1‑143 (MQ=17)
                                                                                                                          ggAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCgg                  >  2:520722/1‑143 (MQ=32)
                                                                                                                                 ccAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAgggggg           >  1:731489/1‑143 (MQ=17)
                                                                                                                                  cAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTTTTTGTCGGTGAACGCTCTCCTGAAAAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGACGGtaga          >  1:228756/1‑140 (MQ=11)
                                                                                                                                   aGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCg         <  1:585573/143‑1 (MQ=32)
                                                                                                                                    ggCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGATAGTCGGTGCAAGCTCGCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCgg        >  1:129795/1‑143 (MQ=11)
                                                                                                                                    ggCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATATGTTGTTTGTAGGCGACCGCGCTCCTCAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGGAGCAACGGCCCGGACGGTGGCgg        >  2:324642/1‑143 (MQ=11)
                                                                                                                                      cATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATGCCTAGCTTATCCTTGTAGGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCAGGc      <  1:911781/143‑1 (MQ=11)
                                                                                                                                       gtCAATTAATACCAAAGGCTCTGCGGAAACATTGCGCCTTTCGTTTTATCTGTTGTTTGGCGGTGAACGCTCTCCTGAGTAGGACAAAGCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCa     <  1:247134/142‑1 (MQ=11)
                                                                                                                                          aaaTAAAACGATAGGCTCAGTCGAAAGACTGGGCTTTTCGTTTTATCTGTTGTTTGTCGGTGATCGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGa  <  1:324995/143‑1 (MQ=12)
                                                                                                                                             |                                                                                                                                           
TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGA  >  NC_000913/4171620‑4171900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.