| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 2,391,775 | IS1 (+) +9 bp | 100% | coding (1259‑1267/1530 nt) | nuoM ← | NADH:quinone oxidoreductase subunit M |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1979270 | NA (NA) | 39 (1.150) | 38/264 | NT | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 2391783 | 0 (0.000) | coding (1259/1530 nt) | nuoM | NADH:quinone oxidoreductase subunit M | |||||
| * | ? | NC_000913 | 2391775 = | 0 (0.000) | 44 (1.290) | 39/264 | NT | 100% | coding (1267/1530 nt) | nuoM | NADH:quinone oxidoreductase subunit M |
| ? | NC_000913 | = 3584195 | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
GCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979129‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCT < NC_000913/2391783‑2391657 acaCTGATGTCCGGCGGTGCTTATGCCATTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATATAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT < 1:323737/140‑1GCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACGGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT > 1:540324/1‑143GCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGCGCACCTCACAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT > 1:57527/1‑143GCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT < 1:387359/143‑1 GCTGATGTCCGGCGGTGCTTCTGGCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGA < 1:89896/143‑1 CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGCAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAACACAGTAAGTTGGCAGCATCACCTGAT > 2:482330/1‑143 gGTCCGGCGGTGC‑TATGCGGTTACGCACCACCCCGTCAGTAGGTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCG < 2:15533/142‑1 TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGT > 1:215118/1‑143 CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCCGGATCACCTGATTACCGTT > 1:275860/1‑143 CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAATAGCTGAACACGAGGGACAGCTGATAGAAACAGAAGCCACTGGACCACCACAAAAACACCGTCGTACACTAAATCAGTAAGTTGGCAGCATCACATGATTACCGTTA > 1:602228/1‑143 TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCT > 1:282714/1‑143 TTGCCGTCACGGACCTCTCCGTCAGTACTTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCATCATCACCTGATTACCGTTATCTCTACCTTT < 2:364590/143‑1 gcgGTTGCGTACCACCGCGTCAGCAGCTGAGCCGGAGTGACAGCTGATAGGAACAGAAGCCACTGGAGCACCTCAAAACCACCATCATACCCTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGG < 2:102091/140‑1 CGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGCGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGC < 2:543428/143‑1 ggcACGCACCGCCCGGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACGATATCCGTCAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCT < 2:444367/140‑1 ACCCCGTCAGTAGCTGAACATGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCAACATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCc > 2:386094/1‑142 CCGTCAGTAGCTGGACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCT < 1:86631/143‑1 CGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTG < 1:617094/143‑1 GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGT < 1:136570/143‑1 TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTT > 2:199915/1‑143 TAGCCGAGCAGGAGGCCGATCTGAGAGAAGCTGAAGCTACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAGGTTGGCATCATCGCCTGATTACCGTTATCTCTCCCTTTGGGCTGGTCTTTGCATCTGTTTATT < 2:209774/143‑1 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGG < 1:361261/143‑1 AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGA > 2:195798/1‑143 GGAGGGACAGCTGATAGAAACAGCAGCAGCTGGAGCTCGTCAAAAACACCATCATACACTAAATCAGTAAGTCGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGTTCTTTGCATCTGTTTATTCGCTGGCGAa > 2:408050/1‑142 ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTAACTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACA > 1:547954/1‑143 TGATAGGAACAGACGCCACTGGAGCACCTCAAAACCTCCATCATTCTCTATTTCAGTAAGTTGGCAGTAGCACCTGATTACCGTTATCTCCACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCG < 2:168507/143‑1 TGATAGAAACAGCAGCCGCTGGAGCACCTCAAAAACACCATCATACACTCACGCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTATGCATCTGTTTATTCGCTGGCGATGTTACATCGCG < 2:171084/143‑1 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGACGATGTTACATCGCGCTT > 2:560526/1‑143 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTACATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGATACATAGCGCTTA > 2:196452/1‑143 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTA < 2:215118/143‑1 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTACATCAGTAAGTTGGCAGCATCACCTGATTGCCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTAC > 1:350820/1‑143 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGCTGTTACATCGCGCTCACT > 2:453904/1‑143 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAG < 1:574483/143‑1 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATGCGCTGGCGAGGTTACATCGCGCTTACTTCGGTAAAGCGA < 1:43074/143‑1 ggGCACCTCAAAAACACCATCATACTCTATGTCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCGCTACCTGTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAA < 2:91284/141‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGA > 1:572241/1‑143 CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTCTACAAGCAATCAAACGCGGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATT > 1:307278/1‑143 CCATCATACACTAAATCAGTAAGTGGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCA < 1:137767/143‑1 ctTACACTAAATCAGTAAGTTGGCCGCATCCCCTCATTACCGTTACCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATACTCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAA < 2:670926/141‑1 CATACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAA > 1:585573/1‑143 TACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACT > 1:320625/1‑143 ACACTAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCTTCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCGGATTGCCAGCCAGGAACTG > 1:441918/1‑143 TAAATCAGTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAG < 1:655727/143‑1 GTAAGTTGGCAGCATCACCTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAACGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTC > 2:124061/1‑143 AGTTGGCACCATCACCTGATTACCGTTATCTCTACCGTGGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCTAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCT < 1:292242/143‑1 GCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979129‑1979270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCT < NC_000913/2391783‑2391657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |