breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (sorted from low to high skew)
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 572411533 (15.660)12 (0.370) 9/250 NT 2.7% coding (44/102 nt) ylcH DLP12 prophage; uncharacterized protein YlcH
?NC_000913 = 572431 349 (10.830)coding (64/102 nt) ylcH DLP12 prophage; uncharacterized protein YlcH
* ? NC_000913 570695 =1436 (42.180)10 (0.310) 7/250 NT 0.76% intergenic (+267/‑198) ybcK/ybcL DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
?NC_000913 570719 = 1241 (38.510)intergenic (+291/‑174) ybcK/ybcL DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
* ? NC_000913 = 5706391552 (45.590)3 (0.100) 3/238 NT 0.21% intergenic (+211/‑254) ybcK/ybcL DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
?NC_000913 = 570663 1445 (47.120)intergenic (+235/‑230) ybcK/ybcL DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
* ? NC_000913 570627 =1523 (44.740)6 (0.200) 6/238 NT 0.42% intergenic (+199/‑266) ybcK/ybcL DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
?NC_000913 570677 = 1445 (47.120)intergenic (+249/‑216) ybcK/ybcL DLP12 prophage; putative recombinase/DLP12 prophage; periplasmic protein YbcL
* ? NC_000913 569768 =1698 (49.880)3 (0.090) 3/248 NT 0.19% coding (867/1527 nt) ybcK DLP12 prophage; putative recombinase
?NC_000913 569802 = 1479 (46.270)coding (901/1527 nt) ybcK DLP12 prophage; putative recombinase
* ? NC_000913 = 5691591622 (47.650)26 (0.830) 8/242 NT 1.7% coding (258/1527 nt) ybcK DLP12 prophage; putative recombinase
?NC_000913 = 569161 1591 (51.020)coding (260/1527 nt) ybcK DLP12 prophage; putative recombinase