| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 122,012 | IS1 (+) +9 bp | 7.9% | intergenic (‑461/‑72) | aroP ← / → pdhR | aromatic amino acid:H(+) symporter AroP/DNA‑binding transcriptional dual regulator PdhR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 20563 | NA (NA) | 12 (0.080) | 12/276 | NT | 8.1% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 122020 | 128 (0.960) | intergenic (‑469/‑72) | aroP/pdhR | aromatic amino acid:H(+) symporter AroP/DNA‑binding transcriptional dual regulator PdhR | |||||
| * | ? | NC_000913 | 122012 = | 128 (0.960) | 10 (0.070) | 10/276 | NT | 6.8% | intergenic (‑461/‑80) | aroP/pdhR | aromatic amino acid:H(+) symporter AroP/DNA‑binding transcriptional dual regulator PdhR |
| ? | NC_000913 | 257908 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
ACTCCAGTTGCTGCTCAATCACATCGGAGAGTTTTGGTTGGCGGATTTTGCTGTAGGCCATGAGTTCCTGTCTTAAGCCACTTGCCGAAGTCAATTGGTCTTACCAATTTCATGTCTGTGACGCTAAAGTAACAAAGTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/122152‑122012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTC > NC_000913/257908‑258056 ACTCCAGTTGCTGCTCAATCACATCGGAGAGTTTTGGTTGGCGGATTTTGCTGTAGGCCATGAGTTCCTGTCTTAAGCCACTTGCCGAAGTCAATTGGTCTTACCAATTTCATGTCTGTGACGCTAAAGTAACAAAGTATTGGTAATGAC < 1:1372193/150‑1 AGTTTTGGTTGGCGGATTTTGCTGTAGGCCATGAGTTCCTGTCTTAAGCCACTTGCCGAAGTCAATTGGTCTTACCAATTTCATGTCTGTGACGCTAAAGTAACAAAGTATTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCA < 1:1142982/150‑1 TTTGGTTGGCGGATTTTGCTGTAGGCCATGAGTTCCTGTCTTAAGCCACTTGCCGAAGTCAATTGGTCTTACCAATTTCATGTCTGTGACGCTAAAGTAACAAAGTATTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAT < 1:1488589/150‑1 TGGTTGGCGGATTTTGCTGTAGGCCATGAGTTCCTGTCTTAAGCCACTTGCCGAAGTCAATTGGTCTTACCAATTTCATGTCTGTGACGCTAAAGTAACAAAGTATTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAA < 1:1412211/150‑1 GCGGATTTTGCTGTAGGCCATGAGTTCCTGTCTTAAGCCACTTGCCGAAGTCAATTGGTCTTACCAATTTCATGTCTGTGACGCTAAAGTAACAAAGTATTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG < 2:1818873/150‑1 GGCCATGAGTTCCTGTCTTAAGCCACTTGCCGAAGTCAATTGGTCTTACCAATTTCATGTCTGTGACGCTAAAGTAACAAAGTATTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGC < 2:2148952/150‑1 TGAGTTCCTGTCTTAAGCCACTTGCCGAAGTCAATTGGTCTTACCAATTTCATGTCTGTGACGCTAAAGTAACAAAGTATTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTC > 1:953882/1‑150 gGTGACGCTAAAGTAACAAAGTATTGGTAATGACGCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCA < 2:751035/149‑1 GTGACGCTAAAGTAACAAAGTATTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAG > 1:1743914/1‑150 AAAGTAACAAAGTATTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGT < 1:1711721/150‑1 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTC < 1:2140094/150‑1 TGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTC < 1:2148646/150‑1 ACTCCAGTTGCTGCTCAATCACATCGGAGAGTTTTGGTTGGCGGATTTTGCTGTAGGCCATGAGTTCCTGTCTTAAGCCACTTGCCGAAGTCAATTGGTCTTACCAATTTCATGTCTGTGACGCTAAAGTAACAAAGTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/122152‑122012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTC > NC_000913/257908‑258056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |