| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 239659 | 44 (0.850) | 3 (0.060) | 3/254 | NT | 6.5% | coding (531/771 nt) | yafV | 2‑oxoglutaramate amidase |
| ? | NC_000913 | = 239703 | 44 (0.880) | coding (487/771 nt) | yafV | 2‑oxoglutaramate amidase | |||||
GCGCGTCGGCAGTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTAGCACACCAGCGGCAAAATACGCCAGCCGCGCCAT > NC_000913/239523‑239800 | gcgcGTCGGCAGTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCCATCGCGCGGGCCGTCCGCAAt > 1:596116/1‑143 (MQ=255) gcgTCGGCAGTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAAtgc < 2:576221/143‑1 (MQ=255) gcgTCGGCAGTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGCCAGCAAtgc > 1:561220/1‑143 (MQ=255) ccGGCAGTAGCGACAATCTCCCCCTGCGGATTATTCCCCCGGCTGTCACCGCGATAATGGCAGCCGCTGCCACCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAAtgcctg < 1:464961/142‑1 (MQ=255) ccgCAGTAGCGATAATCCCTCCTGGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAAtgcctgc < 2:199161/141‑1 (MQ=255) cGGCAGTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAAtgcctgc < 2:622245/143‑1 (MQ=255) gCAGTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCa > 1:577517/1‑143 (MQ=255) gCAGTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCa > 1:5180/1‑143 (MQ=255) acAGTAGCGATAATCTCTCCTTGCGGATTAATCCCCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTTATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCa < 2:334964/142‑1 (MQ=255) aGTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGCTTGCCTACCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGt > 1:327739/1‑143 (MQ=255) ggaGCGATAAGCTCTCCGTGCGGATTAATCACCCGCCGGGCACCGCGAGAATGGCGGCCGTTGCCATCGCGGCCGACGCGATTGCATCCCGCCACGTACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTg < 2:528474/141‑1 (MQ=255) gTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTg < 2:528489/143‑1 (MQ=255) gCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGGCTTATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCag < 1:862485/143‑1 (MQ=255) cGATAATCCCTCCTTGCGGATGAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATGCGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCaga < 1:68210/143‑1 (MQ=255) tcCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCTATTGCCTCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCACTGCACAGAGCCCGGAg > 1:303931/1‑143 (MQ=255) tcCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTGAATCGCGCGGGCCGTCAGCAATGCCTTCCAGGGAAGAGGGCGCGGAg > 2:569199/1‑143 (MQ=255) gCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCAGCCAGTGCAGGGAGCGCGGAGCAGGc > 2:913000/1‑143 (MQ=255) ggATTAACCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCa < 1:678418/143‑1 (MQ=255) aTCGCCCGGCCGACACCGCGAGAATGGCAGCCGGTGCCATCGCTGCCGACGCGATCGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGc < 1:208442/143‑1 (MQ=255) cgcccggCTGTCACCGCGTTAACGGCCGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGCTTCTCAATCGCGCGGGCCGTCGGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCga > 2:170101‑M2/3‑141 (MQ=255) cACCCGGCTGCCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCAGCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCga > 1:161647‑M2/1‑141 (MQ=255) cccGGCTGCCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCgacg > 1:207734‑M2/1‑139 (MQ=255) ccGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGGTGGCgccgt < 1:47693‑M2/143‑6 (MQ=255) tGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAgg < 1:611252/143‑1 (MQ=255) aCCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGAGCGGGCCGTCAGCAATGCCTGCCAGTGCAGGGAGCGCGGGCCAGGCCAGTTGGCGACGTACAgcgagg > 1:812156/1‑138 (MQ=255) cgcgATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCACTCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGCGCCGGCCAGTCGCCgacgtcccgcgcgagc < 2:913963‑M2/143‑17 (MQ=255) cgcgATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACCGGGCGAgg > 2:805170/1‑143 (MQ=255) acaaTGGCAGCCCTGGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATGCTCAATCGCGCGGGCCGCCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCAt < 1:201640/141‑1 (MQ=255) aaTGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCCTACGGCCACAGACGCCTGAGTCTCAATCGCGCGGGCCGGCAGCAATGCCGGCCGGTGCCGGGGGCGCGGGGCGAGCCAGTTGGCGACGGGCAGGGGGAggggacaa > 2:310789/1‑137 (MQ=255) cAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCgccaactggcctgctccgcgctctctgcactggcaggcattgctgacg < 1:27513‑M1/120‑49 (MQ=255) cAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCgccaactggcctgctccgcgctctctgcactggcaggcattgctgacg > 2:27513‑M1/1‑72 (MQ=255) cAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATCCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGtt < 1:566636/143‑1 (MQ=255) ggCCGTCGCCGGCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCGATCGCGCGGGCCGTCAGCAATGCCGGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTg < 2:366915/142‑1 (MQ=255) gCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTgc < 1:699430/143‑1 (MQ=255) ccAGCGCTGCCGACGCGATGGCATCCCGCCACATACGCCTGATGCGCAGTCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTgcg < 2:759597/143‑1 (MQ=255) cATAGCTGCCGGCGCGATCGCATCCCGCCACATACGCCTGATTCTCAAGCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCGAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTgcgc < 2:79231/143‑1 (MQ=255) aCGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAgg > 2:33049/1‑143 (MQ=255) aTTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACCCAGGCAAAc > 1:711539/1‑143 (MQ=255) cATCCCGCCACATACGCCTGATTCTCAATCGTGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTaa < 1:579324/143‑1 (MQ=255) aTCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGCGATCGCGCGACCACACAGGCAAACGTagc > 2:977341/1‑141 (MQ=255) tCCCGGCACATACGCCTGACTCTCAATCGCGCGGGCCGTCAGCACTGCCTCCCAGTGCAGACACCGCGGACCAGGCCAGTCAGCGACGTCCACGCCGAGACACTGATCGTTAAGATTCCGCCACCACACAGGAACACgccccc > 2:843193/1‑138 (MQ=255) tgcGCCACGTACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTc < 1:623345/141‑1 (MQ=255) gCCACATACGGTGGATGCGCAATCGCGCGGGCCGTCAGCAGTGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTa < 2:273559/143‑1 (MQ=255) gCCACATACGCCTTATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTa < 1:21508/143‑1 (MQ=255) tACGCCTAATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGCGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTAGCacac < 1:642394/143‑1 (MQ=255) ccTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTGCGGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTAGCACCCCAGc > 2:881505/1‑143 (MQ=255) ctcAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAGAACGTAAGTCGTAGCGCACCAGCGGCaaaa > 1:99458/1‑143 (MQ=255) tcAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCCACGAACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACAACACAGGAAAACGTAAGTCGTAGCACACCAGCGGCaacac > 2:169386/1‑140 (MQ=255) cAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGAGCGACCACGGAGGAACACGCACGTCGTAGCACACCAGCGGCAAAATa > 1:375591/1‑143 (MQ=255) gctcgCGCGGGACGTCggcgactggccggcgccgcgctctctgcactggcaggcattgctgacggcccgcgcgagtgagaatcaggcgtatgtggcgggatgcaatcgcgtcggcagcgatggcaacggctgccattatcgcg < 2:913963‑M1/141‑128 (MQ=255) aaTCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTAGCACACCAGCGGCAAAATAc < 1:564504/143‑1 (MQ=255) gCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTAGCACACCAGCGGCAAAATACGCCAGCcgcg > 2:86692/1‑143 (MQ=255) ccGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGGGCTTGCGCGACCACACAGGAAAACGTAAGTCGTAGCGCACCAGCGGCAAAACACGCCACCCgcgc > 2:66952/1‑143 (MQ=255) acggcgccacctggcctgctccgcgctctctgcactggcaggcattgctgacggcccgcgcgattgagaatcaggcgtatgtggcgggatgcaatcgcgtcggcagcgatggcaacggctgccattatcgcggtgacagccgg < 1:47693‑M1/139‑139 (MQ=255) cGTCgccaactggcctgctccgcgctctctgcactggcaggcattgctgacggcccgcgcgattgagaatcaggcgtatgtggcgggatgcaatcgcgtcggcagcgatggcaacggctgccattatcgcggtggcagccggg > 1:207734‑M1/1‑4 (MQ=255) cGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCgacggcccgcgcgattgagaatcaggcgtatgtggcgggatgcaatcgcgtcggcagcgatggcaacggctg > 2:27513‑M2/1‑48 (MQ=255) cGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCgacggcccgcgcgattgagaatcaggcgtatgtggcgggatgcaatcgcgtcggcagcgatggcaacggctg < 1:27513‑M2/120‑73 (MQ=255) tCgccaactggcctgctccgcgctctctgcactggcaggcattgctgacggcccgcgcgattgagaatcaggcgtatgtggcgggctgcaatcgcgtcggcagcgatggcaacggctgccattatcgcggtggcagccgggtg > 1:161647‑M1/1‑2 (MQ=255) tCgccaactggcctgctccgcgctctctgcactggcaggcattgccgacggcccgcgcgattgagaagcaggcgtatgtggcgggatgcaatcgcgtcggcagcgatggcaacggcggccgttaacgcggtgacagccgggcg > 2:170101‑M1/1‑2 (MQ=255) tCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGCGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTAGCAAACCAGCGGCAAAATACGCCAGCGGCGccct > 2:772500/1‑141 (MQ=255) tCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTAGCACACCAGCGGCAAAATACGCCAGCCGCGccct > 1:705770/1‑141 (MQ=255) tCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTGGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTAGCACACCAGCGGCAAAATACGCCAGCCGCGCCAt > 1:414992/1‑143 (MQ=255) | GCGCGTCGGCAGTAGCGATAATCTCTCCTTGCGGATTAATCACCCGGCTGTCACCGCGATAATGGCAGCCGTTGCCATCGCTGCCGACGCGATTGCATCCCGCCACATACGCCTGATTCTCAATCGCGCGGGCCGTCAGCAATGCCTGCCAGTGCAGAGAGCGCGGAGCAGGCCAGTTGGCGACGTACAGGGCGAGGTCATAATCGTTGAGATTGCGCGACCACACAGGAAAACGTAAGTCGTAGCACACCAGCGGCAAAATACGCCAGCCGCGCCAT > NC_000913/239523‑239800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |