New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1315791 =	45 (0.870)	4 (0.080)	3/252	NT	8.9%	intergenic (‑21/+65)	yciF/yciG	DUF892 domain‑containing protein YciF/protein YciG
	?	NC_000913	1315813 =	39 (0.790)					intergenic (‑43/+43)	yciF/yciG	DUF892 domain‑containing protein YciF/protein YciG

TTAATTTTTCATTTGATGTTGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGC  >  NC_000913/1315650‑1315925                                                                                                                                              |                                                                                                                                       ttcaTTTTTCATTTGATGTCGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTGTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACt                                                                                                                                       <  1:811413/140‑1 (MQ=255) ttACTTTTTCATTTGCTGTGGTGCTTGCGCGTTTTGGCAGTGCCCGGGTTGATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACt                                                                                                                                       <  2:4848/143‑1 (MQ=255) ttAATTTCTCATTTGATGTTGCTCTTGCGAGTTTCGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTCTCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACt                                                                                                                                       <  1:404746/143‑1 (MQ=255)     tttttCATTTGATGTTGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTACAGTGAAATCACTGCGa                                                                                                                                   >  1:987193/1‑143 (MQ=255)             ttGATGTTGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACg                                                                                                                           >  2:278730/1‑143 (MQ=255)              tGATGTTGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACgg                                                                                                                          >  1:280157/1‑143 (MQ=255)               gATGTTGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGc                                                                                                                         <  1:534635/143‑1 (MQ=255)                  gTTGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTGATATTTTCCACCAGTGAAATCACTGCGAGCCATACGGCCCg                                                                                                                      >  1:956710/1‑143 (MQ=255)                  gTTGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCg                                                                                                                      <  1:664266/143‑1 (MQ=255)                  gTTGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATAACTGCGAGCCATACGGcgcg                                                                                                                      >  1:539736/1‑143 (MQ=255)                    aaatgatccgcaacgcgcatctgaagcgggtaaaaaaggcggtcaacaaagcggtggtaataaatcaggcaaatcctgattcaccgttaattattaatatcagctgataaagataattgcatCTGCGAGCCATACGGCCCGCa                                                                                                                    >  2:734585‑M1/123‑143 (MQ=255)                           ccgcaacgcgcatcggaagcgggtaaaaaaggcggtcaacaaagcggtgttaataaatcaggcaaatcctgattcaccgttaattattaatatcagctgataaagataattgcatCTGCGAGCCATACGGCCCGCAGATGCaa                                                                                                             >  2:418828‑M1/116‑143 (MQ=255)                             gatttttGCCAGTGCCCGGGTTACTTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAAtt                                                                                                           <  1:287530/140‑1 (MQ=255)                                  ttGCCAGTGACCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATGCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGCCCCGCAGATGCAATTATCtt                                                                                                      <  2:759729/143‑1 (MQ=255)                                          gCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCt                                                                                              <  2:525532/143‑1 (MQ=255)                                           cccGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTg                                                                                             >  2:232451/1‑143 (MQ=255)                                            ccGGGTTAATTGTTTTTCCGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGa                                                                                            <  1:294563/143‑1 (MQ=255)                                               ggTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGatat                                                                                         <  2:275410/143‑1 (MQ=255)                                                  tatttGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaa                                                                                      <  2:800346/140‑1 (MQ=255)                                                   aaTTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaat                                                                                     <  1:912025/143‑1 (MQ=255)                                                    tgtGTTTTGCTGCGCTGTAGGTGTCTGAAAGCAGGTGAATAAATACAGCTTCAATGGTCTTCATATTCCTATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaata                                                                                    <  1:952143/141‑1 (MQ=255)                                                          tttCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATAAATCTTCAATGGTCTTCATATTAATATTGTTCTCAAGTGAAATAACTGCGAGAAATAGGCACAGCAGATGCACATAACTTTATAAGTTGACATTAATACTTAAc                                                                              >  2:115035/1‑143 (MQ=255)                                                           tccTGCGCTGTCGCTATCTAAAAGCGGGTGAAAAAATACCTCTTCAATGGTCTTCATATTCATATTTGTCTCCAGGTAAAGCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACg                                                                             <  2:527256/141‑1 (MQ=255)                                                              tGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATCCGGCCCGCAGCTGCAATTATCTTTATCAGCTGATATTCCTAATTAACGGTg                                                                          >  2:737962/1‑143 (MQ=255)                                                                   tGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAAGCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCa                                                                     <  1:792821/143‑1 (MQ=255)                                                                   tGTAGGTATCTGAAAGCAGGCGAATGAATACATCTTCAATGGTCTTCATATGCAGATTTTTCTCCAGTGAGATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCa                                                                     <  1:142836/143‑1 (MQ=255)                                                                     tAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAgg                                                                   >  1:436344/1‑143 (MQ=255)                                                                     gaGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAgg                                                                   <  2:237720/142‑1 (MQ=255)                                                                           tCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCAGATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGc                                                             <  1:219890/143‑1 (MQ=255)                                                                               aaaGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCATATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTCAATCAGGATTTGCCTGa                                                         <  1:285859/143‑1 (MQ=255)                                                                               aaaGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGa                                                         <  1:440295/143‑1 (MQ=255)                                                                               aaaGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCAGACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGa                                                         >  1:202923/1‑143 (MQ=255)                                                                                aaGCAGGTGAATAAATACATCTTCACTGGCCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGAt                                                        <  1:32202/143‑1 (MQ=255)                                                                                 aGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGAtt                                                       >  1:630865/1‑143 (MQ=255)                                                                                  gCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTCGCCTGActt                                                      >  1:456739/1‑143 (MQ=255)                                                                                       tGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTac                                                 <  2:630865/143‑1 (MQ=255)                                                                                       tGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTac                                                 >  1:407001/1‑143 (MQ=255)                                                                                                  ctCTTCAATGTTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgt                                      <  1:144897/142‑1 (MQ=255)                                                                                                  aTCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgt                                      >  1:592906/1‑143 (MQ=255)                                                                                                  aTCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCACTCAGGCTCACAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgt                                      <  1:232451/143‑1 (MQ=255)                                                                                                   tCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgtt                                     >  1:265327/1‑143 (MQ=255)                                                                                                      tCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGAc                                  <  2:89028/143‑1 (MQ=255)                                                                                                       cAATGGTCTTCATATTCATATTTTTCTCCAGTGAAAGCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGAcc                                 <  1:460141/143‑1 (MQ=255)                                                                                                         aTGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACAACCGCTTTGTTGACCGc                               >  1:50067/1‑143 (MQ=255)                                                                                                          tGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTCTCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTCCCACCGCCTTGTTGCCCGcc                              >  1:132765/1‑143 (MQ=255)                                                                                                            aattattaatatcagctgataaagataattgcatCTGCGAGCCATACGGCCCGCa                                                                                                                    <  1:902510‑M1/21‑1 (MQ=255)                                                                                                            aattattaatatcagctgataaagataattgcatCTGCGAGCCATACGGCCCGCa                                                                                                                    >  2:902510‑M1/35‑55 (MQ=255)                                                                                                             tCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACGACCGCTTTGTTGACCGCCttt                           >  1:690376/1‑143 (MQ=255)                                                                                                             tCTTCATATTCATATTTTTCTCCAGTAAAAGCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACAGCTTTGTTGACCGCCttt                           >  2:125201/1‑143 (MQ=255)                                                                                                                  atattcatattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGCCCGCCTTTTTTAc                      >  2:712139/1‑143 (MQ=255)                                                                                                                                 tcCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGATGATATTAATAATTCACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATgcgc       >  2:955954/1‑143 (MQ=255)                                                                                                                                      tGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGCATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGc  >  1:576264/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                       TTAATTTTTCATTTGATGTTGCTCTTGCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGC  >  NC_000913/1315650‑1315925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.