New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1315791 =	45 (0.870)	4 (0.080)	3/252	NT	8.9%	intergenic (‑21/+65)	yciF/yciG	DUF892 domain‑containing protein YciF/protein YciG
	?	NC_000913	1315813 =	39 (0.790)					intergenic (‑43/+43)	yciF/yciG	DUF892 domain‑containing protein YciF/protein YciG

GCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGCGGATCATTTTTAAAATTACCGCCGCTATG  >  NC_000913/1315676‑1315954                                                                                                                                          |                                                                                                                                              ccgcaacgcgcatcggaagcgggtaaaaaaggcggtcaacaaagcggtgttaataaatcaggcaaatcctgattcaccgttaattattaatatcagctgataaagataattgcatCTGCGAGCCATACGGCCCGCAGATGCaa                                                                                                                                          >  2:418828‑M1/116‑143 (MQ=255)   gatttttGCCAGTGCCCGGGTTACTTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAAtt                                                                                                                                        <  1:287530/140‑1 (MQ=255)        ttGCCAGTGACCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATGCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGCCCCGCAGATGCAATTATCtt                                                                                                                                   <  2:759729/143‑1 (MQ=255)                gCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCt                                                                                                                           <  2:525532/143‑1 (MQ=255)                 cccGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTg                                                                                                                          >  2:232451/1‑143 (MQ=255)                  ccGGGTTAATTGTTTTTCCGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGa                                                                                                                         <  1:294563/143‑1 (MQ=255)                     ggTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGatat                                                                                                                      <  2:275410/143‑1 (MQ=255)                        tatttGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaa                                                                                                                   <  2:800346/140‑1 (MQ=255)                         aaTTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaat                                                                                                                  <  1:912025/143‑1 (MQ=255)                          tgtGTTTTGCTGCGCTGTAGGTGTCTGAAAGCAGGTGAATAAATACAGCTTCAATGGTCTTCATATTCCTATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaata                                                                                                                 <  1:952143/141‑1 (MQ=255)                                tttCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATAAATCTTCAATGGTCTTCATATTAATATTGTTCTCAAGTGAAATAACTGCGAGAAATAGGCACAGCAGATGCACATAACTTTATAAGTTGACATTAATACTTAAc                                                                                                           >  2:115035/1‑143 (MQ=255)                                 tccTGCGCTGTCGCTATCTAAAAGCGGGTGAAAAAATACCTCTTCAATGGTCTTCATATTCATATTTGTCTCCAGGTAAAGCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACg                                                                                                          <  2:527256/141‑1 (MQ=255)                                    tGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATCCGGCCCGCAGCTGCAATTATCTTTATCAGCTGATATTCCTAATTAACGGTg                                                                                                       >  2:737962/1‑143 (MQ=255)                                         tGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAAGCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCa                                                                                                  <  1:792821/143‑1 (MQ=255)                                         tGTAGGTATCTGAAAGCAGGCGAATGAATACATCTTCAATGGTCTTCATATGCAGATTTTTCTCCAGTGAGATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCa                                                                                                  <  1:142836/143‑1 (MQ=255)                                           tAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAgg                                                                                                >  1:436344/1‑143 (MQ=255)                                           gaGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAgg                                                                                                <  2:237720/142‑1 (MQ=255)                                                 tCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCAGATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGc                                                                                          <  1:219890/143‑1 (MQ=255)                                                     aaaGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCATATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTCAATCAGGATTTGCCTGa                                                                                      <  1:285859/143‑1 (MQ=255)                                                     aaaGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGa                                                                                      <  1:440295/143‑1 (MQ=255)                                                     aaaGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCAGACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGa                                                                                      >  1:202923/1‑143 (MQ=255)                                                      aaGCAGGTGAATAAATACATCTTCACTGGCCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGAt                                                                                     <  1:32202/143‑1 (MQ=255)                                                       aGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGAtt                                                                                    >  1:630865/1‑143 (MQ=255)                                                        gCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTCGCCTGActt                                                                                   >  1:456739/1‑143 (MQ=255)                                                             tGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTac                                                                              >  1:407001/1‑143 (MQ=255)                                                             tGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTac                                                                              <  2:630865/143‑1 (MQ=255)                                                                        ctCTTCAATGTTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgt                                                                   <  1:144897/142‑1 (MQ=255)                                                                        aTCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgt                                                                   >  1:592906/1‑143 (MQ=255)                                                                        aTCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCACTCAGGCTCACAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgt                                                                   <  1:232451/143‑1 (MQ=255)                                                                         tCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgtt                                                                  >  1:265327/1‑143 (MQ=255)                                                                            tCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGAc                                                               <  2:89028/143‑1 (MQ=255)                                                                             cAATGGTCTTCATATTCATATTTTTCTCCAGTGAAAGCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGAcc                                                              <  1:460141/143‑1 (MQ=255)                                                                               aTGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACAACCGCTTTGTTGACCGc                                                            >  1:50067/1‑143 (MQ=255)                                                                                tGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTCTCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTCCCACCGCCTTGTTGCCCGcc                                                           >  1:132765/1‑143 (MQ=255)                                                                                   tCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACGACCGCTTTGTTGACCGCCttt                                                        >  1:690376/1‑143 (MQ=255)                                                                                   tCTTCATATTCATATTTTTCTCCAGTAAAAGCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACAGCTTTGTTGACCGCCttt                                                        >  2:125201/1‑143 (MQ=255)                                                                                        atattcatattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGCCCGCCTTTTTTAc                                                   >  2:712139/1‑143 (MQ=255)                                                                                                       tcCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGATGATATTAATAATTCACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATgcgc                                    >  2:955954/1‑143 (MQ=255)                                                                                                            tGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGCATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGc                               >  1:576264/1‑143 (MQ=255)                                                                                                              ttgcatctgcgggccgtatggctcgcagATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTAACACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCCGATGCGCGTTGCgg                             >  2:418828‑M2/29‑143 (MQ=255)                                                                                                                     tgcgggccgtatggctcgcagATGCAATTATCTTTATCAGCTGATATTAATAAtt                                                                                                              <  1:902510‑M2/34‑1 (MQ=255)                                                                                                                     tgcgggccgtatggctcgcagATGCAATTATCTTTATCAGCTGATATTAATAAtt                                                                                                              >  2:902510‑M2/22‑55 (MQ=255)                                                                                                                     tgcgggccgtatggctcgcagATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGCGGATCAttt                      >  2:734585‑M2/22‑143 (MQ=255)                                                                                                                           ccATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGCGGATCATTTTTaaaa                <  1:934916/143‑1 (MQ=255)                                                                                                                                 ggCCCTCAGATGCACTTATCTTTATCATCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGCGGATCATTTTTAAAATTAccg          <  2:368921/143‑1 (MQ=255)                                                                                                                                 ggCCCGCAGATGCAATTATCTTTAGCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCTCTTCAGATGCGCGTTGCGGATCATTTTTAAAATTAccg          <  1:314828/143‑1 (MQ=255)                                                                                                                                  gCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGCGGATCATTGTTAACATTAacgc         >  2:936103/1‑143 (MQ=255)                                                                                                                                   cccGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGCTGCGCGTTGCGGCTCATTTTTCAACTTAccccc        >  2:190013/1‑143 (MQ=255)                                                                                                                                   cccGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGCGGATCATTTTTAAAATTAccgcc        >  2:611516/1‑143 (MQ=255)                                                                                                                                         taTGCAGTTGTGTTTGTCCGCGGATATTAAGAATTAAGCGTGGCGCAGGATGCGCCTGATCGAAATGCTCCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGCGGATCATTTTTAAAATTACCGCCGCTATg  <  1:277422/142‑1 (MQ=255)                                                                                                                                          |                                                                                                                                              GCGAGTTTTGCCAGTGCCCGGGTTAATTGTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTTTTACCCGCTTCAGATGCGCGTTGCGGATCATTTTTAAAATTACCGCCGCTATG  >  NC_000913/1315676‑1315954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.