New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 566777 =NA (NA)1744 (40.730) 260/278 0.0 97.3% noncoding (1/1258 nt) IS3 repeat region
?NC_000913 = 572471 48 (1.110)coding (6/456 nt) ybcN DLP12 prophage; DNA base‑flipping protein

Only 100 of 1768 total aligned reads displayed.

AGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/566918‑566777
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTTGTTC  <  NC_000913/572471‑572329
                                                                                                                                                                                                                                                                                              
AGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAG                                                                                                                                                 <  1:692161/143‑1
AGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAG                                                                                                                                                 >  1:290899/1‑143
   gTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTC                                                                                                                                              <  2:85429/142‑1
   TTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCAGTATTGCTGGGTAAGATCAGTTg                                                                                                                                              >  2:671235/1‑142
    TCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCA                                                                                                                                             >  1:129217/1‑143
     CAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTCCTGGGTAAGATCAGTTCAC                                                                                                                                            >  2:498292/1‑143
         GCTTCACCGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTT                                                                                                                                        <  1:65552/143‑1
           TTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCC                                                                                                                                      >  2:24855/1‑143
                TGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGGGTTACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGGTCAGGTCACGCTTCCCCTCC                                                                                                                                 >  1:161678/1‑143
                TGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCC                                                                                                                                 >  1:63720/1‑143
                  CGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGC                                                                                                                               >  1:431646/1‑143
                   GAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCCGTTCACGCTTCCCCTCCGCA                                                                                                                              >  1:731401/1‑143
                    AAATTCGGGCGAATGCTGTTTACGGGGTTTTTGACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAG                                                                                                                             <  2:38531/143‑1
                     agTTCAGGGGATGGCCGTTTACGGGGTTTTTTGCTGGTTGATACTGTTTTTGTTATGTGAGTCACCTCTGACTGAGAGTTTACTCACGTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGA                                                                                                                            <  2:632631/141‑1
                     AATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGA                                                                                                                            <  1:462888/143‑1
                       TTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATCCTGTTTTTGTCATGTGAGTCACCTCTGACTGCGAGTTTACTCACTTAGCCGCGTGTCCACTACTGCTGGGTAAGATCAGTTCCCGCTTCCACTCGGCAGAcg                                                                                                                          >  2:185480/1‑141
                         CAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTCCTCTCTTAACCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTC                                                                                                                       <  1:149907/143‑1
                          AGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCg                                                                                                                      >  1:281850/1‑142
                           GGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCGGCAGCGGTgga                                                                                                                      >  1:138329/1‑140
                           GGCGAATGCTGTTTACGGGGTTTTTGACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACGCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAA                                                                                                                     <  2:354481/143‑1
                            GCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAA                                                                                                                    >  2:510676/1‑143
                            GCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCCCCGCAGAGGTCAAA                                                                                                                    >  2:143704/1‑143
                             CGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAAC                                                                                                                   >  1:249912/1‑143
                                 cggTGTTTCCGGCGTTTTTTACTGGTCGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTGACTCACGTAGCCGCGTGTCCCCTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTA                                                                                                               <  2:551025/140‑1
                                 TGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCGCCTCTGACTGAGAGTTTACTCACTTCGCCGCGTGTCAACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAAGGCTc                                                                                                               >  2:438140/1‑142
                                 TGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTGTTGGCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTA                                                                                                               <  1:56412/143‑1
                                  tCTGTTTACAGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTGTGACTGAGAGTATACTCACTGAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAG                                                                                                              <  1:100029/142‑1
                                   ccggTTACGGGGTTTTTTACTGGTGGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGA                                                                                                             <  1:267731/139‑1
                                      TTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGC                                                                                                          >  1:306870/1‑143
                                        cACGGCGTCTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAA                                                                                                        <  1:614910/142‑1
                                            GGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAA                                                                                                    <  1:421922/143‑1
                                             GGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTCAGATCAGTTCACGCTTCCCGTCCTCAGCGGTCAAACGATAGATCCAAAGTAT                                                                                                   >  2:46236/1‑143
                                              GTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGCATT                                                                                                  >  2:699455/1‑143
                                                TTTTTACTGGGTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGC                                                                                                <  1:533189/143‑1
                                                 TTTTACTGGTGGATGCTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCCCTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCA                                                                                               <  2:603901/143‑1
                                                         GTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCCCTATTGCTGGGTAAGATCCGTTCACGCTTCCCCTCCGCCACGGTCAAACCCTAGACGCACACACTTGCAGGTCCATc                                                                                       >  2:755080/1‑142
                                                         GTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATT                                                                                       >  1:484442/1‑143
                                                         GTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGACCGGTGTTAACGCTAGATGCAGGGAATTGCAGGGGCATT                                                                                       >  1:541810/1‑143
                                                            GATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCACACGCTAGATGCAAAGAATTGCAGGTGCATTTCT                                                                                    <  1:781225/143‑1
                                                            GATACTGTTTTTGTCATGTGAGTCACCCCTGAGTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGCTAAGATCAGTTCACGCCTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCT                                                                                    <  2:171247/143‑1
                                                                  GTTTTTGTCATGTGTGGCGCCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCGCTATGGCGGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCT                                                                              <  1:408583/143‑1
                                                                  GTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGCATTGCAGGTGCATTTCTGCcgct                                                                              >  1:89997/1‑139
                                                                   TTTTTGTCAGGTGAGTCACCTCTGACTGAGAGGCTACTCACTTAGCCGCTTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGTTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTG                                                                             <  2:260117/143‑1
                                                                    TTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGT                                                                            <  1:514540/143‑1
                                                                      TTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGA                                                                          >  2:449265/1‑143
                                                                       TGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAA                                                                         <  2:126525/143‑1
                                                                        GTCATGTGCTTGACCTCTGACGGCGAGTTTACTCACTTAGTCCTGTGTCCACTATGGCTGGGTAAGATCAGTTCCCGCTTCCCCTCCGCAGAGTTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAG                                                                        <  2:235592/143‑1
                                                                        GTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAG                                                                        <  2:408315/143‑1
                                                                           ATGTGCGTTTCCTCTGCCTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGA                                                                     <  2:425425/143‑1
                                                                           ATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGACTTGCAGGTGCATTTCTGCATGGGTGAAGGGA                                                                     >  1:195791/1‑143
                                                                           ATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGA                                                                     <  1:315105/143‑1
                                                                           ATGTGAGTCACCTCTGACTGAGAATTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCCCGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTCCAGCTGCACTTCTGCATCTGTGAAGGGA                                                                     >  2:790516/1‑143
                                                                            TGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAG                                                                    >  2:772428/1‑143
                                                                            TGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGACGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCCGCGAAGGGAG                                                                    >  2:622625/1‑143
                                                                               GAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAACGAATTGCAGGTGCATTTCTGCACCTGTGAAGGGAGAAG                                                                 >  2:710463/1‑143
                                                                                 GTCACCTCTGACTGAGAGTTTACTCACTTGGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAG                                                               >  1:439823/1‑143
                                                                                  TCACCTCTGACTGCGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGA                                                              <  2:721950/143‑1
                                                                                  TCACCTCTGACTGAGAGTTTACTCACTTAGTCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATCGCAGCTGCATTTCTGCATCTGTGACGGGAGAAGAaa                                                              >  2:293043/1‑141
                                                                                  TCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGCATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGA                                                              >  2:20547/1‑143
                                                                                  TCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGCAGAGA                                                              >  2:330221/1‑143
                                                                                      aggTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTT                                                          <  1:385008/140‑1
                                                                                      CTCTGACTTAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCTCCTCCGCGGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTT                                                          <  2:538844/143‑1
                                                                                      CTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTT                                                          >  1:472959/1‑143
                                                                                          GACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGAT                                                      >  1:347620/1‑143
                                                                                          GACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGCCAAACGCTAGATGCAAAGAATTGCAGGTGCATTCCTGCATCTGTGAAGGAAGAAGAGAGTGTGGAT                                                      >  2:107209/1‑143
                                                                                            CTGAGAGAGAACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTG                                                    <  1:36366/143‑1
                                                                                             TGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCT                                                                                                                                         >  2:743172/1‑58
                                                                                               AGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTAT                                                 >  2:367845/1‑143
                                                                                               AGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAA                                                                         >  1:625982/1‑119
                                                                                                 AGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGT                                               >  2:157726/1‑143
                                                                                                  GTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTG                                              >  1:448847/1‑143
                                                                                                   TTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGC                                             >  1:766189/1‑143
                                                                                                       CTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGCGAGGTGGGATTGGATGTGCGCAT                                         >  2:651854/1‑143
                                                                                                       CTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGCGTTTGGATTGTATGTGCGCAT                                         >  1:175768/1‑143
                                                                                                        gCACCTAGCCGCGTGTGCACTATTGCGGGGTAAGAGCGGCTCACGCGTCCCCTCCGCAGAGGTCAAGCGCGAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATA                                        <  1:684398/142‑1
                                                                                                         CACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGATGGGAGATGAGAGTTTGGATTGTATGTGCGCATAA                                       >  1:753142/1‑143
                                                                                                          ACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGCAGTGGGTTTGGATTGTATGTGCGCATAAA                                      >  1:79579/1‑143
                                                                                                          ACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAA                                      <  1:602231/143‑1
                                                                                                           CTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCCAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAAC                                     >  2:56934/1‑143
                                                                                                                CCGCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATCGCAGATGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTGTGGATTGCTTGAGCGCATAAACGcact                                >  2:579797/1‑139
                                                                                                                  GCGTGTCCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGCGACGAGAGTTTGGTTTGTATGTGCGCATATACGTCCCCG                              >  1:213547/1‑143
                                                                                                                      GTCCACTATTGCTGGGTAAGATCATGTCCCCCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTGTGGATTGTATGTGCGCATAAACGTCCCCGTTTA                          <  1:397582/143‑1
                                                                                                                        CCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGC                        >  2:524240/1‑143
                                                                                                                        CCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGC                        >  1:57621/1‑143
                                                                                                                        CCACTATTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATGGTATGTGCGCATAAACGTCCCCGTTTAGC                        >  1:497858/1‑143
                                                                                                                        CCACTATGGCAGGGTCAGATCAGTTCACGCATGCCATCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGCGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCTCCGTTTAGC                        <  2:680121/143‑1
                                                                                                                           ctgTTGCTGGGTAAGATCTGTTCAGGCTTCCCCTTGGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCA                     <  2:308247/140‑1
                                                                                                                              TTGCTGTGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCCAACGCTAGATGCAAAGAATTGCAGGTTCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAA                  <  2:280561/143‑1
                                                                                                                              TTGCTGGGTAAGCCCAGTTCACGCCTCCCCTCCGCAGAGGTCCAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAA                  <  1:237211/143‑1
                                                                                                                              TTGCTGGGTAAGATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAA                  <  1:222993/143‑1
                                                                                                                                   GGGTAAGATCAGTTCACGCTTCCCCTACGAAGAGCACAAACGCGAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCAC             <  1:333518/143‑1
                                                                                                                                         GATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGcgc       >  1:117046/1‑140
                                                                                                                                         GATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGA                                                       >  1:670796/1‑95
                                                                                                                                         GATAAGTTCGCGCTTCCCCTCCGCAGAGGTCAAAGGGTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGT       <  1:72115/143‑1
                                                                                                                                          ATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTT      >  2:478653/1‑143
                                                                                                                                          ATCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTAACCGGAGTT      >  2:344294/1‑143
                                                                                                                                           TCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCGCCGTTTAGCGCGGAAGTCACCGGAGTTG     >  2:22191/1‑143
                                                                                                                                           TCAGTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTTG     >  1:702069/1‑143
                                                                                                                                              GTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTTGTTC  >  1:556412/1‑143
                                                                                                                                              GTTCACGCGTCCCCACCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTTGTTC  <  1:592065/143‑1
                                                                                                                                                                                                                                                                                              
AGCTTCAGGGCTTCACTGCGAAATTCAGGCGAATGCTGTTTACGGGGTTTTTTACTGGTTGATACTGTTTTTGTCATGTGAGTCACCTCTGACTGAGAGTTTACTCACTTAGCCGCGTGTCCACTATTGCTGGGTAAGATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/566918‑566777
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTCACGCTTCCCCTCCGCAGAGGTCAAACGCTAGATGCAAAGAATTGCAGGTGCATTTCTGCATCTGTGAAGGGAGAAGAGAGTTTGGATTGTATGTGCGCATAAACGTCCCCGTTTAGCGCAGAAGTCACCGGAGTTGTTC  <  NC_000913/572471‑572329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.