New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	463830 =	52 (1.140)	3 (0.070)	3/250	NT	5.9%	intergenic (+44/‑107)	ppiD/ybaV	periplasmic folding chaperone/helix‑hairpin‑helix 3 family protein
	?	NC_000913	463856 =	46 (1.070)					intergenic (+70/‑81)	ppiD/ybaV	periplasmic folding chaperone/helix‑hairpin‑helix 3 family protein

AGGGACAGGGTAATGAGCAGTGCTTTAATTCCGTGTTTCATACTGTTTTCTCCTTGTTTGTTAACAGTGGAATCACCTTAACGGCAGTGAAAACAGTAAACAAATGGCAATGTTCAGAAATGGAAAAGGCCGCGAAAGCGACCTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/463977‑463830 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttttcCATTTCTGAACATTGCCATTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTACCCTGTCCCTGGCCTGTGCCGGAATGTCT  >  NC_000913/463856‑463996                                                                                                                                                                                                                                                                                                   AGGGACAGGGTAATGAGCAGTGCTTTAATTCCGTGTTTCATACTGTTTTCTCCTTGTTTGTTAACAGTGGAATCGACTTAACGGCAGTGAAAACAGTAACCAAATGGCAATGTTCAGAAATGGAAAAGGCCGCGAAAGCGACC                                                                                                                                                    >  2:8941/1‑143   GGACAGGGTAATGAGCAGTGCTTTAATTGCGTGTTCCATGCTGTTTTCTCCTTGTTTGTTAACAGTGGAATCCCCTTAACGGCAGTGAAAACAGTAAACAAATGGCAATGTTCAGAAATGGAAAAGGCCGCGAAAGCGACCTT                                                                                                                                                  <  1:845698/143‑1   GGACAGGGTAATGAGCAGTGCTTTAATTCCGTGTTTCATACTGTTTTCTCCTTGTTTGTTAACAGTGGAATCACCTTCACGGCAGTGAACACAGTAAACAACTGGCAATGTTCAGACATGGAAAAGGCCGCGAAAGCGCCCTg                                                                                                                                                  >  1:29702/1‑142   GGACAGGGTAATGAGCAGTGCTTTAATTCCGTGTTTCATACTGTTTTCTCCTTGTTTGTTAACAGTGGAATCACCTTAACGGCAGTGAAAACAGTAAACAAATGGCAATGTTCAGAAATGGAAAAGGCCGCGAAAGCGACCgt                                                                                                                                                  >  2:86318/1‑141   GGACAGGGTAATGAGCAGTGCTTTAATTCCGTGTTTCATACTGTTTTCTCCTTGTTTGTTAACAGTGGAATCACCTCACCGGCAGTGAATACATTAAACAAATGGCAATGTTCAGAAATGGAAAAGGCCGCGAAAGCGACCTT                                                                                                                                                  <  1:847894/143‑1              TGAGCAGTGCTTTAATTCCGTGTTTCATACTGTTTTCTCCTTGTTTGTTAACAGTGGAATCACCTTAACGGCAGTGAAAACAGTAAACAAATGGCAATGTTCAGAAATGGAAAAGGCCGCGAAAGCGACCTTTTCCATTTCTG                                                                                                                                       <  2:292780/143‑1                                                                                               AGTAAACAAATGGCAATGTTCAGAAATGGAAAAGGCCGCGAAAGCGACCTTTTCCATTTCTGAACATTGCCATTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACA                                                      >  1:348689/1‑143                                                                                                  AAACAAATGGCAATGTTCAGAAATGGAAAAGGCCGCGAAAGCGACCTTTTCCATTTCTGAACATTGCCATTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCATGCTTAACAAACAAGGAGAAAACAGTATGAAACACGG                                                   >  2:628353/1‑143                                                                                                                                              ccgTTTCCATTTCTGAACATTGCCATTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACGGCTCATTACCCTGTCCCTGGCCTGTGCCGGAA       <  2:138360/140‑1                                                                                                                                              CCTTTTCCATTTCTGAACATTGCCATTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTACCCTGTCCCTGGCCTGTGCCGGAA       <  1:789054/143‑1                                                                                                                                               CTTTTCCGTGTCTGAGCATTGCCAGTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTACCCTGTCCCTGGCCTGTGCCGGAAT      <  2:883336/143‑1                                                                                                                                                TTTTCCATTTCTGAACATTGCCATTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTACCCTGTCCCTGGCCTGTGCCGGAAgg     >  1:314634/1‑141                                                                                                                                                   TCCATTTCTGAACATTGCCATTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGGAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTACCCTGGCCCTGGCATGTGACGGAAAGTCT  >  2:254267/1‑143                                                                                                                                                   TCCATTTCTGAACATTGCCATTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTACCCTGTCCCTGGCCTGTGCCGGAATGTCT  <  1:628353/143‑1                                                                                                                                                                                                                                                                                                   AGGGACAGGGTAATGAGCAGTGCTTTAATTCCGTGTTTCATACTGTTTTCTCCTTGTTTGTTAACAGTGGAATCACCTTAACGGCAGTGAAAACAGTAAACAAATGGCAATGTTCAGAAATGGAAAAGGCCGCGAAAGCGACCTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/463977‑463830 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttttcCATTTCTGAACATTGCCATTTGTTTACTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTACCCTGTCCCTGGCCTGTGCCGGAATGTCT  >  NC_000913/463856‑463996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.