New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	463830 =	52 (1.140)	3 (0.070)	3/250	NT	5.9%	intergenic (+44/‑107)	ppiD/ybaV	periplasmic folding chaperone/helix‑hairpin‑helix 3 family protein
	?	NC_000913	463856 =	46 (1.070)					intergenic (+70/‑81)	ppiD/ybaV	periplasmic folding chaperone/helix‑hairpin‑helix 3 family protein

TCACCCAGAACAACGCACAAATCGTCTTTGAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTACC  >  NC_000913/463689‑463969                                                                                                                                              |                                                                                                                                             agactttccgtcacatgccagggccagggtaatgagcagtgctttaattccgtgtttcatactgtttcctccttgtttgttaacagtggaatcaccttaacggcagtgaaaacagtaaacaaatggcaatgttcagaaatgGa                                                                                                                                             >  2:254267‑M1/142‑143 (MQ=255) agacattccggcacaggccagggacagggtaatgagcagtgctttaattccgtgtttcatactgttttctccttgtttgttaacagtggaatcaccttaacggcagtgaaaacagtaaacaaatggcaatgttcagaaatgGa                                                                                                                                             <  1:628353‑M1/2‑1 (MQ=255)    ccttccggcacaggccagggacagggtaatgagcagtgctttaattccgtgtttcatactgttttctccttgtttgttaacagtggaatcaccttaacggcagtgaaaacagtaaacaaatggcaatgttcagaaatgGaaaa                                                                                                                                          >  1:314634‑M1/139‑143 (MQ=255)     ccAGAACAACGCACAAATCGTCTTTGAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATACTCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGCAAAg                                                                                                                                         >  1:344130/1‑143 (MQ=255)     attccggcacaggccagggacagggtaatgagcagtgctttaattccgtgtttcatactgttttctccttgtttgttaacagtggaatcaccttaacggcagtgaaaacagtaaacaactggcaatgctcagacacgGAAAAg                                                                                                                                         <  2:883336‑M1/6‑1 (MQ=255)      ttccggcacaggccagggacagggtaatgagccgtgctttaattccgtgtttcatactgttttctccttgtttgttaacagtggaatcaccttaacggcagtgaaaacagtaaacaaatggcaatgttcagaaatggaaacgg                                                                                                                                        <  2:138360‑M1/7‑4 (MQ=255)      ttccggcacaggccagggacagggtaatgagcagtgctttaattccgtgtttcatactgttttctccttgtttgttaacagtggaatcaccttaacggcagtgaaaacagtaaacaaatggcaatgttcagaaatgGAAAAgg                                                                                                                                        <  1:789054‑M1/7‑1 (MQ=255)            aacGCACAAATCGTCTTTGAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCtt                                                                                                                                  >  1:233632/1‑143 (MQ=255)                  caAATCGGCTTTTAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAAGTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCgg                                                                                                                            <  1:555911/143‑1 (MQ=255)                   aaaGCGTGTTTGAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGc                                                                                                                           <  1:709787/143‑1 (MQ=255)                       cGTCTTTGAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGTAACAGCAGTAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTCCGCCGCCttt                                                                                                                       >  2:357000/1‑143 (MQ=255)                           tttGAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCGTTTccg                                                                                                                   >  1:695593/1‑142 (MQ=255)                              gAATCTCTGATGAGTAACCAGCGTAAAGAGGCGAAAATCAAATTTGGCTATGCGCTGGAACATCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCAttt                                                                                                                <  1:180984/143‑1 (MQ=255)                              gAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTACGCGGCCTTTTCCAttt                                                                                                                >  2:772586/1‑143 (MQ=255)                               aaGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTc                                                                                                               <  1:228934/143‑1 (MQ=255)                                aGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATACTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCt                                                                                                              >  1:104076/1‑143 (MQ=255)                                   tctGATGAGGAACCTGCGTAAAACGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGaa                                                                                                           <  1:221297/143‑1 (MQ=255)                                       atgaGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTGACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACAtt                                                                                                       <  2:272519/143‑1 (MQ=255)                                       atgaGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACagt                                                                                                       >  1:368369/1‑141 (MQ=255)                                       atgaGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTCTCCATTTCTGCACCtt                                                                                                       >  1:35878/1‑143 (MQ=255)                                           gTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCa                                                                                                   >  2:558327/1‑143 (MQ=255)                                            tAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCAt                                                                                                  >  1:667044/1‑143 (MQ=255)                                                  ccgtgtttcatactgttttctccttgtttgttaagcatggaatcaccttaacggcagtgaaaacagtaaacaaatggcaatgttcagaaatgGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGttt                                                                                            >  2:628353‑M1/93‑143 (MQ=255)                                                     tgtttcatactgttttctccttgtttgttaacagtggaatcaccttaacggcagtgaaaacagtaaacaaatggcaatgttcagaaatgGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑Ct                                                                                        >  1:348689‑M1/90‑143 (MQ=255)                                                         gagGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCCGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCGTTTCCATTTCTGAACATTGCCATTTCTTTA‑CTtttt                                                                                    >  2:289976/1‑143 (MQ=255)                                                          agGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGtttt                                                                                   <  1:100542/143‑1 (MQ=255)                                                            gCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCa                                                                                 <  2:758911/143‑1 (MQ=255)                                                                  aTCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCg                                                                           >  2:278658/1‑143 (MQ=255)                                                                   ccAAACTTGGCGCTGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGt                                                                          <  2:644691/142‑1 (MQ=255)                                                                     aaaaTTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTa                                                                        >  1:8941/1‑143 (MQ=255)                                                                      acgttGGCGATGCGCTGGAACAGCAATAAGCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTaa                                                                       <  2:387361/140‑1 (MQ=255)                                                                        aTTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAgg                                                                     <  1:637356/143‑1 (MQ=255)                                                                             cGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGAtt                                                                <  2:33038/143‑1 (MQ=255)                                                                                 gggcTGGATCATCAAGGAGCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCAc                                                            <  2:667683/141‑1 (MQ=255)                                                                                 gcgcTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCAc                                                            >  1:534126/1‑143 (MQ=255)                                                                                  cgcgGGAACAGAAATAATCCTGATGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACt                                                           <  2:4356/143‑1 (MQ=255)                                                                                   gcgagaccAGCAATTATCCTGCAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGCAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTg                                                          <  1:24710/136‑1 (MQ=255)                                                                                   gcTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCTCTGCCGTTAAGGTGATTccccgg                                                          >  2:792171/1‑139 (MQ=255)                                                                                    cTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGt                                                         <  1:9530/143‑1 (MQ=255)                                                                                        aaCAGCAATACTCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTaac                                                     <  1:34960/143‑1 (MQ=255)                                                                                        aaCAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTaac                                                     <  2:794905/143‑1 (MQ=255)                                                                                        aaCAGCAACAAGCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCGTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTaac                                                     <  2:464981/143‑1 (MQ=255)                                                                                             cAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACAGTGCCAGTTGTTCA‑CACTGTTCACTCCCGATAAGGAGACACCACTGTGaaccacca                                                >  2:82956/1‑138 (MQ=255)                                                                                              aataatCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCCTATGTTTAGTTGCTATTCGTG‑CGTTAAGGTGGTTCTACTGTTAacatacaa                                               >  2:629075/1‑143 (MQ=255)                                                                                              aataatCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTaacaaa                                                  >  2:810004/1‑140 (MQ=255)                                                                                              aataatCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTaacaaa                                                  <  1:810004/140‑1 (MQ=255)                                                                                                taatCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGCTTTCACTGCCGTTAAGTTGGCTCAACGGCTAACAAACAAgg                                             >  2:530070/1‑143 (MQ=255)                                                                                                  atCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGgag                                           <  1:558327/143‑1 (MQ=255)                                                                                                   tCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTCACAAACAAGgaga                                          >  2:463738/1‑143 (MQ=255)                                                                                                   tCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGgaga                                          <  1:269337/143‑1 (MQ=255)                                                                                                      tggcgccgccTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTCTA‑CTGTTTTCACTGCCATTAAGGTGATTCCACCGTTAACAAACCAGGAGaaaa                                       <  2:886406/139‑1 (MQ=255)                                                                                                       gAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAAc                                      >  2:318097/1‑143 (MQ=255)                                                                                                          gccgccTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGt                                   <  1:191627/143‑1 (MQ=255)                                                                                                           acgccgcGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGTACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTa                                  <  1:125635/142‑1 (MQ=255)                                                                                                             gccTCGCAAAAAAATGCGTTGCAGCGAGAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATg                                <  2:579622/143‑1 (MQ=255)                                                                                                                tCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGaaa                             <  2:233632/143‑1 (MQ=255)                                                                                                                    aaaaaaaTGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAacaca                         >  1:823917/1‑142 (MQ=255)                                                                                                                    aaaaaaaTGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACg                         <  1:318097/143‑1 (MQ=255)                                                                                                                                 gCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTCAAGGTGATTCCCCCACTACCTGCCAGAGGGAAAACAGTATGAAACGCGGAATTAAACCACt            >  2:867187/1‑143 (MQ=255)                                                                                                                                      tGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCAGTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCa       <  1:414044/143‑1 (MQ=255)                                                                                                                                      cagaaatgGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCa       <  2:292780‑M1/135‑1 (MQ=255)                                                                                                                                         aaCAAGAAACGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTa    <  1:872272/143‑1 (MQ=255)                                                                                                                                           cAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTAcc  >  1:546825/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                             TCACCCAGAACAACGCACAAATCGTCTTTGAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAATCCTGAAGCCGCCTCGCAAAAAAATGCGTTGCAGCTGTAACAAGAAAAGGTCGCTTTCGCGGCCTTTTCCATTTCTGAACATTGCCATTTGTTTA‑CTGTTTTCACTGCCGTTAAGGTGATTCCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGAATTAAAGCACTGCTCATTACC  >  NC_000913/463689‑463969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.