New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	412958 =	39 (0.860)	3 (0.070)	3/252	NT	7.1%	coding (2796/3147 nt)	sbcC	ATP dependent, structure specific DNA nuclease ‑ SbcC subunit
	?	NC_000913	412982 =	41 (0.940)					coding (2772/3147 nt)	sbcC	ATP dependent, structure specific DNA nuclease ‑ SbcC subunit

GCGAGTCAATACGTGTTTTATGGCTGACCAGATCCGAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCG  >  NC_000913/412816‑413100                                                                                                                                               |                                                                                                                                               gCGAGGCAAGACGTGTTTGATGGCTGACGAGATCCGAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTcc                                                                                                                                                <  2:512564/143‑1 (MQ=255)   aggactggggatatctgaattcgctaataggttccaaagagggcgataaattccgcaagtttgcccaggggctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgctatcggtcaCAg                                                                                                                                              <  2:99979‑M1/3‑1 (MQ=255)           aCGTGTTTTATGGCTGACCAGATCCGAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCCTCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGc                                                                                                                                      >  1:98359/1‑143 (MQ=255)                 tttATGGCTGACCAGATCCGAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCtt                                                                                                                                <  2:675046/143‑1 (MQ=255)                 tttATGGCTGACCAGATCCGAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCtt                                                                                                                                >  2:661175/1‑143 (MQ=255)                           taataggttccaacgagggcgacaaactccgcaagtttgcccaggggctgacgctggataatttagtccatctcgctcatcagcaacttacccggcttcacgggcgctatctgttcCAGCGCCTCGCTGGCTTTGCGCTGTaa                                                                                                                      >  2:665670‑M1/117‑143 (MQ=255)                           actaGATCTGAAAGCGTAAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTaa                                                                                                                      <  1:2864/140‑1 (MQ=255)                           aCCAGGTCCGACAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTaa                                                                                                                      <  2:519558/143‑1 (MQ=255)                                    gAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTCGCTTTGCGCTATAACAACTAgcg                                                                                                             >  1:827920/1‑143 (MQ=255)                                      cagcgccatcgccagcgccACACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGcc                                                                                                           <  1:741965/142‑1 (MQ=255)                                            cagcgccagcgccagACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACCGACAGCGCCCGTGCa                                                                                                     >  2:164848/1‑143 (MQ=255)                                                gccagcgccagACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAGCCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTGACAGATAGCGCCGGTGCAGCCg                                                                                                 >  1:99979/1‑143 (MQ=255)                                                     cgccagACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTaa                                                                                            <  1:727024/143‑1 (MQ=255)                                                         agACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTg                                                                                        <  2:608617/143‑1 (MQ=255)                                                                   ggtaaCTTTCGCCGCCGGCAAGGGTACGGGTATCGCGGACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTGCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCg                                                                              <  2:562977/140‑1 (MQ=255)                                                                   ggAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCCGTCCCAGCTCTCCCCCGTGCACCCGCGTAAGCTGCTGATTAGCg                                                                              >  1:264816/1‑143 (MQ=255)                                                                    caggggctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgctatctgttaCAGCGCCTCGCTGGCTTTGCGCTGTAACAg                                                                                                                   >  1:561221‑M1/76‑105 (MQ=255)                                                                    caggggctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgctatctgttaCAGCGCCTCGCTGGCTTTGCGCTGTAACAg                                                                                                                   <  2:561221‑M1/30‑1 (MQ=255)                                                                       acgtccgccgcCGGAAAGGGTACGGGTATCGCGTACCGCGCCTGCCTGGCGGCGGTCAGCAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGAGAGCGCCCGTGCAGCCGGGTAAGTTGCTGAGTAGCGAGAt                                                                          <  1:201882/138‑1 (MQ=255)                                                                       aCTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTGAGTTGCTGGTTAGCGAGAt                                                                          >  1:314753/1‑143 (MQ=255)                                                                        cTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACTTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATg                                                                         <  1:450615/143‑1 (MQ=255)                                                                         tttCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATgg                                                                        >  2:362702/1‑143 (MQ=255)                                                                              ccgccgGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTCACAGATAGCGCCCGTGCAGCCGGGTACGTTGCCGATTCGCGCGACGGACTac                                                                   >  2:112757/1‑142 (MQ=255)                                                                                gccgGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTGGACTTCCAGCGCCTCACTGGCTTTGCGCTGTAACAGATAGCGCCCGGGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTCAAt                                                                 >  2:421343/1‑143 (MQ=255)                                                                                   ggAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTAt                                                              <  1:661175/143‑1 (MQ=255)                                                                                   ggAAAGGGTACGGGTATCGCGTACCGCATCTGCCTCCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTAt                                                              <  1:605526/143‑1 (MQ=255)                                                                                           tACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGCCTAAATTGTCCGGCGTc                                                      >  2:598126/1‑143 (MQ=255)                                                                                           tACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTc                                                      >  1:566781/1‑143 (MQ=255)                                                                                                   tCGGGTACCGCATCTGCCTGCCTGGTACCAACAACCTGTACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTg                                              <  2:416136/143‑1 (MQ=255)                                                                                                          ccGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGAGTAAATTATCCAGCGTCAGCCCCTGGGCAAAc                                       >  1:806303/1‑143 (MQ=255)                                                                                                               tcggcctgccAGGTATCAACAGCCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCg                                  <  2:416818/140‑1 (MQ=255)                                                                                                                 tgcctgccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGAGCAGCCGGGTAAGTTGCTGATTCGCGAGCTGGACTAAATTATCCAGCGTCAGCCACTGGGCAAACTTGCggc                                >  1:773592/1‑142 (MQ=255)                                                                                                                  gcctgtcAGGTATCAACAACCTCGACTTCCAGCGGCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGAGTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGaa                               <  1:394765/143‑1 (MQ=255)                                                                                                                    ctgccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAAtt                             >  1:421712/1‑143 (MQ=255)                                                                                                                    ctgccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCGGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAAtt                             <  2:623084/143‑1 (MQ=255)                                                                                                                       ccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAGACTTGCGGAATTTAt                          >  1:97894/1‑143 (MQ=255)                                                                                                                       ccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTAt                          >  1:751723/1‑143 (MQ=255)                                                                                                                           gTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGAAGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACCGCCGGAATTTATCGcc                      >  2:377817/1‑143 (MQ=255)                                                                                                                                  caacCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGGTTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCCCTTTg               >  2:640162/1‑143 (MQ=255)                                                                                                                                     ccTCGCCTCCCAGCGCTTCGCTGCCTTTGCGCTGTAACAGACAGCGCCCGTGCAGCCGGGTAAGTTGCTCATTAGCTAGATGGACTAAATTATCCCGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGaa            <  1:4555/143‑1 (MQ=255)                                                                                                                                      cTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAAc           <  1:727910/143‑1 (MQ=255)                                                                                                                                      cTCGACTTCCAGCGCCTCGCTGGATTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGTTGATTAAGGAGATGGACTAAATTATCCAGCGACAGCCCCTGGGCCAACCTTCGGAATTGATATCACTGTTTGGAAc           >  2:232840/1‑143 (MQ=255)                                                                                                                                       tCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCGTTGGAccc          >  1:124106/1‑143 (MQ=255)                                                                                                                                        cGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGGTGGTGATTAGCGAGATGGACTAAATTATCCCGCGTCAGCCCCTGGGCAAACTTGCGGAATCTATCGCCCTCGTTGGAACCt         >  2:231168/1‑143 (MQ=255)                                                                                                                                             tCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTACGGAGCTGATTTGCGAGATGGACTACATTATCCAGCGTCAGACCGTGGGCATACGTGCGGAGTGTATCGCCCTATTGGGAAACTagtcg    >  1:373081/1‑139 (MQ=255)                                                                                                                                              ccAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGc   >  2:658125/1‑143 (MQ=255)                                                                                                                                              ccAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGc   <  1:426518/143‑1 (MQ=255)                                                                                                                                               CAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCg  <  2:676978‑M1/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                               GCGAGTCAATACGTGTTTTATGGCTGACCAGATCCGAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCG  >  NC_000913/412816‑413100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.