New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	412958 =	39 (0.860)	3 (0.070)	3/252	NT	7.1%	coding (2796/3147 nt)	sbcC	ATP dependent, structure specific DNA nuclease ‑ SbcC subunit
	?	NC_000913	412982 =	41 (0.940)					coding (2772/3147 nt)	sbcC	ATP dependent, structure specific DNA nuclease ‑ SbcC subunit

ACCAGATCCGAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCGAATTCAGATATCCCCAGTCCTCAA  >  NC_000913/412842‑413124                                                                                                                                             |                                                                                                                                               taataggttccaacgagggcgacaaactccgcaagtttgcccaggggctgacgctggataatttagtccatctcgctcatcagcaacttacccggcttcacgggcgctatctgttcCAGCGCCTCGCTGGCTTTGCGCTGTaa                                                                                                                                              >  2:665670‑M1/117‑143 (MQ=255) actaGATCTGAAAGCGTAAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTaa                                                                                                                                              <  1:2864/140‑1 (MQ=255) aCCAGGTCCGACAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTaa                                                                                                                                              <  2:519558/143‑1 (MQ=255)          gAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTCGCTTTGCGCTATAACAACTAgcg                                                                                                                                     >  1:827920/1‑143 (MQ=255)            cagcgccatcgccagcgccACACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGcc                                                                                                                                   <  1:741965/142‑1 (MQ=255)                  cagcgccagcgccagACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACCGACAGCGCCCGTGCa                                                                                                                             >  2:164848/1‑143 (MQ=255)                      gccagcgccagACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAGCCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTGACAGATAGCGCCGGTGCAGCCg                                                                                                                         >  1:99979/1‑143 (MQ=255)                           cgccagACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTaa                                                                                                                    <  1:727024/143‑1 (MQ=255)                               agACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTg                                                                                                                <  2:608617/143‑1 (MQ=255)                                         ggtaaCTTTCGCCGCCGGCAAGGGTACGGGTATCGCGGACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTGCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCg                                                                                                      <  2:562977/140‑1 (MQ=255)                                         ggAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCCGTCCCAGCTCTCCCCCGTGCACCCGCGTAAGCTGCTGATTAGCg                                                                                                      >  1:264816/1‑143 (MQ=255)                                          caggggctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgctatctgttaCAGCGCCTCGCTGGCTTTGCGCTGTAACAg                                                                                                                                           <  2:561221‑M1/30‑1 (MQ=255)                                          caggggctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgctatctgttaCAGCGCCTCGCTGGCTTTGCGCTGTAACAg                                                                                                                                           >  1:561221‑M1/76‑105 (MQ=255)                                             acgtccgccgcCGGAAAGGGTACGGGTATCGCGTACCGCGCCTGCCTGGCGGCGGTCAGCAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGAGAGCGCCCGTGCAGCCGGGTAAGTTGCTGAGTAGCGAGAt                                                                                                  <  1:201882/138‑1 (MQ=255)                                             aCTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTGAGTTGCTGGTTAGCGAGAt                                                                                                  >  1:314753/1‑143 (MQ=255)                                              cTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACTTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATg                                                                                                 <  1:450615/143‑1 (MQ=255)                                               tttCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATgg                                                                                                >  2:362702/1‑143 (MQ=255)                                                    ccgccgGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTCACAGATAGCGCCCGTGCAGCCGGGTACGTTGCCGATTCGCGCGACGGACTac                                                                                           >  2:112757/1‑142 (MQ=255)                                                      gccgGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTGGACTTCCAGCGCCTCACTGGCTTTGCGCTGTAACAGATAGCGCCCGGGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTCAAt                                                                                         >  2:421343/1‑143 (MQ=255)                                                         ggAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTAt                                                                                      <  1:661175/143‑1 (MQ=255)                                                         ggAAAGGGTACGGGTATCGCGTACCGCATCTGCCTCCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTAt                                                                                      <  1:605526/143‑1 (MQ=255)                                                                 tACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGCCTAAATTGTCCGGCGTc                                                                              >  2:598126/1‑143 (MQ=255)                                                                 tACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTc                                                                              >  1:566781/1‑143 (MQ=255)                                                                         tCGGGTACCGCATCTGCCTGCCTGGTACCAACAACCTGTACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTg                                                                      <  2:416136/143‑1 (MQ=255)                                                                                ccGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGAGTAAATTATCCAGCGTCAGCCCCTGGGCAAAc                                                               >  1:806303/1‑143 (MQ=255)                                                                                     tcggcctgccAGGTATCAACAGCCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCg                                                          <  2:416818/140‑1 (MQ=255)                                                                                       tgcctgccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGAGCAGCCGGGTAAGTTGCTGATTCGCGAGCTGGACTAAATTATCCAGCGTCAGCCACTGGGCAAACTTGCggc                                                        >  1:773592/1‑142 (MQ=255)                                                                                        gcctgtcAGGTATCAACAACCTCGACTTCCAGCGGCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGAGTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGaa                                                       <  1:394765/143‑1 (MQ=255)                                                                                          ctgccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAAtt                                                     >  1:421712/1‑143 (MQ=255)                                                                                          ctgccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCGGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAAtt                                                     <  2:623084/143‑1 (MQ=255)                                                                                             ccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAGACTTGCGGAATTTAt                                                  >  1:97894/1‑143 (MQ=255)                                                                                             ccAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTAt                                                  >  1:751723/1‑143 (MQ=255)                                                                                                 gTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGAAGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACCGCCGGAATTTATCGcc                                              >  2:377817/1‑143 (MQ=255)                                                                                                        caacCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGGTTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCCCTTTg                                       >  2:640162/1‑143 (MQ=255)                                                                                                           ccTCGCCTCCCAGCGCTTCGCTGCCTTTGCGCTGTAACAGACAGCGCCCGTGCAGCCGGGTAAGTTGCTCATTAGCTAGATGGACTAAATTATCCCGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGaa                                    <  1:4555/143‑1 (MQ=255)                                                                                                            cTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAAc                                   <  1:727910/143‑1 (MQ=255)                                                                                                            cTCGACTTCCAGCGCCTCGCTGGATTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGTTGATTAAGGAGATGGACTAAATTATCCAGCGACAGCCCCTGGGCCAACCTTCGGAATTGATATCACTGTTTGGAAc                                   >  2:232840/1‑143 (MQ=255)                                                                                                             tCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCGTTGGAccc                                  >  1:124106/1‑143 (MQ=255)                                                                                                              cGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGGTGGTGATTAGCGAGATGGACTAAATTATCCCGCGTCAGCCCCTGGGCAAACTTGCGGAATCTATCGCCCTCGTTGGAACCt                                 >  2:231168/1‑143 (MQ=255)                                                                                                               ctgttacagcgcaaagccagcgaggcgctgTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTg                                                                      <  2:561221‑M2/75‑1 (MQ=255)                                                                                                               ctgttacagcgcaaagccagcgaggcgctgTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTg                                                                      >  1:561221‑M2/31‑105 (MQ=255)                                                                                                                  ttacagcgcaaagccagcgaggcgctgGAACAGATAGCGCCCGTGAAGCCGGGTAAGTTGCTGATGAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAGTTTGTCGCCCTCGTTGGAACCTATTa                             >  2:665670‑M2/28‑143 (MQ=255)                                                                                                                   tCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTACGGAGCTGATTTGCGAGATGGACTACATTATCCAGCGTCAGACCGTGGGCATACGTGCGGAGTGTATCGCCCTATTGGGAAACTagtcg                            >  1:373081/1‑139 (MQ=255)                                                                                                                    ccAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGc                           <  1:426518/143‑1 (MQ=255)                                                                                                                    ccAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGc                           >  2:658125/1‑143 (MQ=255)                                                                                                                     CAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCg                          <  2:676978‑M1/143‑1 (MQ=255)                                                                                                                       GCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCGaa                        >  2:193091‑M1/1‑143 (MQ=255)                                                                                                                             cGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCGAATTCAGa                  <  1:362702/143‑1 (MQ=255)                                                                                                                             cGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCGAATTCAGa                  <  1:843784/143‑1 (MQ=255)                                                                                                                             cGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTCTGGACCCTCTTAGCGAATTCAGa                  >  2:671198/1‑143 (MQ=255)                                                                                                                                tGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGCTGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCGAATTCAGatgt               >  1:260403/1‑141 (MQ=255)                                                                                                                                          ctgTGACCGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCGAATTCAGATATCCCCAGTCCt     <  2:99979‑M2/140‑1 (MQ=255)                                                                                                                                             tAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCGAATTCAGATATCGCCAGTCCTCaa  >  1:670346/1‑143 (MQ=255)                                                                                                                                             tAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGCCACCTATTAGCGAATTCAGATATCCCCAGTCCTCaa  >  2:638217/1‑143 (MQ=255)                                                                                                                                             tAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGACCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTGTTAGCGAAGTCAGATATCCCCAGTCCTCaa  >  2:459072/1‑143 (MQ=255)                                                                                                                                             tAACAGATAGCGCCCGTGCAGCCGGGATTGGTGTAGTGATGCTATATCGACTAAATTATCCAGCGTCAGCCCCTGGGCAATCGAATGGAAGTAATCGCCCTCCTGGGAAGCTATTATCGAAGTCAGATATCCCCAGTCTTCaa  >  2:678659/1‑143 (MQ=255)                                                                                                                                             |                                                                                                                                               ACCAGATCCGAAAGCGCCAGCGCCAGCGCCAGACTAACGAGGAAACTTTCGCCGCCGGAAAGGGTACGGGTATCGCGTACCGCATCTGCCTGCCAGGTATCAACAACCTCGACTTCCAGCGCCTCGCTGGCTTTGCGCTGTAACAGATAGCGCCCGTGCAGCCGGGTAAGTTGCTGATTAGCGAGATGGACTAAATTATCCAGCGTCAGCCCCTGGGCAAACTTGCGGAATTTATCGCCCTCTTTGGAACCTATTAGCGAATTCAGATATCCCCAGTCCTCAA  >  NC_000913/412842‑413124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.