New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	433694 =	41 (0.900)	4 (0.090)	3/250	NT	9.8%	coding (240/1104 nt)	ribD	fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase
	?	NC_000913	433734 =	35 (0.810)					coding (280/1104 nt)	ribD	fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase

AGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGAT  >  NC_000913/433553‑433834                                                                                                                                              |                                                                                                                                             cttgagaaagcctttattcaattgctcggcttcactcatcatcaggccgtggctgacgtcaatgccagcctgttgcagacggtaaagtccacgcccagcgacctgcgggttaggatcttgcaccgaggcacccacgcgcgcTa                                                                                                                                             <  2:241271‑M1/2‑1 (MQ=255) aGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCCCACTCGAACCCTGTAGCCATCATGGTCGTa                                                                                                                                             >  2:245269/1‑143 (MQ=255)  gATGGCGAAAGTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTAc                                                                                                                                            <  1:638548/143‑1 (MQ=255)      gctagaTTGTCGGTGACGGCTACCGCCAACGTGCGTGTGAACCACATGCCGAAGGACACGGGTGGCGTATGGCAGACGAAAAATCTAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCa                                                                                                                                        <  2:827136/138‑1 (MQ=255)      gCGAAATGGTCGGTGAAGGTGACCACCAACGTGCGCGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGAGGGTGGAAAACCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCa                                                                                                                                        <  2:826977/143‑1 (MQ=255)       cGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGAGCGCCGATGTCAAACTCGAACCCTGTAGCCATCCTGGTCGTACGCAAc                                                                                                                                       >  2:59903/1‑143 (MQ=255)        gAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACAATCGCACCCTGTCGCCATCATCGTCGTACGCCAcc                                                                                                                                      >  2:668738/1‑143 (MQ=255)           ttgtgcGGTGAGGGTTGCCCCCAACGTGCGGGTGGACCACATGCCGAAGTACACTGGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGGCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTg                                                                                                                                   <  2:774590/138‑1 (MQ=255)              gTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGAGACAAAGCCAAAGGTGCGACCGCCTCTGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCtg                                                                                                                                >  2:321683/1‑143 (MQ=255)                  gTGAAGGTTACCACCAACGTGCGGGTGCACCACATGCCGAAGTACACGCGTTGCGTATGGCGAGTGACAAAGCGAAAGGTGCGACCGCCGATGTCTCACTCGACCCCTGTAGCCATCATGGTCGTGCGCCACCGTGCTGTGAc                                                                                                                            >  1:334834/1‑143 (MQ=255)                  gTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCCGGCGCAAAAGCCCAAGGTGCGACCGCCCCCGACACCATCCCAGCCTGTACCCATCATGGCCGTACGCCACCGCGCCGTGAc                                                                                                                            >  2:531297/1‑143 (MQ=255)                     atttttACCACCAGCGTGCGGGTGAACAAGATGCCGAAGTACACGCGTTGCGTAGGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCa                                                                                                                         <  1:262151/139‑1 (MQ=255)                        gTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAACAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCCGCGACGCAccc                                                                                                                      >  2:106195/1‑141 (MQ=255)                             caccaACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCAAACACTGTAGCCAACAAGGTCGTACGCCACCGTGCTGTGACGCACTCATcgc                                                                                                                 >  1:358221/1‑143 (MQ=255)                                    tgatggtctggccgtggctgacgtcaatgccagcctgttgcagacggtaaagtccacgcccagcgacctgcgggttaggatcttgcatcgaggcaaccacgcgcgcTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGc                                                                                                          >  1:787515‑M1/107‑143 (MQ=255)                                      gCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGt                                                                                                        >  1:630420/1‑143 (MQ=255)                                       tcatcaggccgtggctgacgtcaatgccagcctgttgcaggccgtagtgtccacgcccagcgacctgcgggttaggttcttgcatcgaggcaaccacgcgcgcTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTa                                                                                                       >  2:531157‑M1/104‑143 (MQ=255)                                       gcgtcaggccgtggctgacgtcaatgccagcctggtgcggacgggaaagtccacgcccagcgacctgcgggttaggatcttgcatcgaggcaaccacgcgcgcTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTa                                                                                                       >  2:668748‑M1/104‑143 (MQ=255)                                         atcaggccgtggctgacgtcaatgccagcctgttgcagacggtaaagtccacgcccagcgacctgcgggttaggatcttgcatcgaggcaaccacgcgcgcTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAgc                                                                                                     >  1:118641‑M1/102‑143 (MQ=255)                                          gTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGACGCGGGCGTAgcg                                                                                                    >  2:527787/1‑143 (MQ=255)                                                 acaTGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCAATCATGGTCGTACGCCACCGCGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCTTgg                                                                                             >  2:584732/1‑143 (MQ=255)                                                    tGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTg                                                                                          >  1:501189/1‑143 (MQ=255)                                                       cGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTCCGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCt                                                                                       <  1:464108/143‑1 (MQ=255)                                                         aaGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCTCTGGCGTAGCGCGCGCGGTTGCCtac                                                                                     >  2:820162/1‑141 (MQ=255)                                                           gTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGAAGGACCGCCTGTGTCACACTCGAACCGTGTAGCAATCCTGGTCGTACGCCGCCGTGCTGGGACGCACTCATCGCCACTGGCGCAGCGCGCGCGGTTGCCTCGAt                                                                                   >  2:317973/1‑143 (MQ=255)                                                            tACACGCGTTGCGTATGGCGGGTGAAAAAGCCCAAGGTGCGACCGCCTACGTCACACTCGAACCCTGTAGCCATGACGGCCGTGCGCCACCGCGCGGTGATGCACGACTCGCAGCTGGAGCAGCGCGCGCGGTTGCCTCGaag                                                                                  >  2:657784/1‑141 (MQ=255)                                                               acGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCaa                                                                               >  1:819495/1‑143 (MQ=255)                                                                      gCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCACGCGTGGGTGCCTCGATGAAAGagacta                                                                        >  2:679957/1‑138 (MQ=255)                                                                       cttATGGCCGGTGAGACAGCCAGAGGTGCTGCCGCCTATGTCACACTCGCACCCAGTAGCCATCATGGTCGGACGCCGCCGTGCTGTGACGCACTCATCGCAGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGAACCTaa                                                                       <  2:419313/141‑1 (MQ=255)                                                                       cGTATGGCGGGTGACAAAGCCAAAGGTGTGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTaa                                                                       <  2:157387/143‑1 (MQ=255)                                                                         tATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAAcc                                                                     >  1:174034/1‑143 (MQ=255)                                                                                   gAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGc                                                           <  1:858795/143‑1 (MQ=255)                                                                                        atccAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGc                                                      <  1:722322/141‑1 (MQ=255)                                                                                          ccAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGATGGCGTAGCGCGCGTGGTTGCATCGATGAAAGAGCCTACCCCGCAGGCGGCTGGGCGt                                                    >  2:696826/1‑143 (MQ=255)                                                                                                    gACCGCCTATGTCACACTCGACCCATGTGGCCTTCGTGGTCGTATGCTACGCGGCTGTGACGCACTCATCGTCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTAcc                                          <  1:647487/143‑1 (MQ=255)                                                                                                     aCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGCTGCAAGATCCTAACCCGCAGGTCGCTGGGCGCGGACTTTAcag                                         >  2:792406/1‑141 (MQ=255)                                                                                                        gCCTATGTCACACCCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGTTTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCt                                      <  1:562872/143‑1 (MQ=255)                                                                                                         ccTATGTCACACTCGGTCCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTg                                     <  1:230507/143‑1 (MQ=255)                                                                                                          cTATGTCACACTGGTGCCCTGTTGCCATCGTGGTCGTACGCGACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGGGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGc                                    <  2:4874/143‑1 (MQ=255)                                                                                                            aTGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCaa                                  <  1:777210/143‑1 (MQ=255)                                                                                                              gTCACACGCGGACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTTACGCACTCATCGCCGCTGGCGTAGCGCGCGGGGTTGCCTCGATGCAAGATCCTACCCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACa                                <  2:142638/143‑1 (MQ=255)                                                                                                               tCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGATGTGAAGCACTCATCGCCGCTAGCGTAGCGCGCGTGGTTACCTCGATGCAATATCCTAAACCGCAGGTCGCTGAGCGCGGAATTTACAGTGTGCACCac                               >  2:125030/1‑142 (MQ=255)                                                                                                                cacaCTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAgg                              <  2:734908/143‑1 (MQ=255)                                                                                                                         aCCCTGTATCCATCATGGTCGTACGCCCCCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTg                     <  1:59903/143‑1 (MQ=255)                                                                                                                              gTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGCGGCCTTTACCGTCTGCACCACGCTCGCATTGACGTc                >  1:18835/1‑143 (MQ=255)                                                                                                                                    agcctGGTCGCACGCGTCCGTGTTGTGCCGCAGTCATCTCCGCTGTCGTGGCGCGCGTGGTTGCCTCCATGCAAGATCCTAACCCGCAGGTCGCTGGGCTTGGACTTTACCGTCTGTAACAGGCTGGCATTGACGTCAGCCAc          <  2:48260/139‑1 (MQ=255)                                                                                                                                     tcatGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACg         <  1:430772/143‑1 (MQ=255)                                                                                                                                      cagggTCGTACGCCGCCGTGGTGTGGCGCACACATCACCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGAGCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACgg        <  1:557020/140‑1 (MQ=255)                                                                                                                                        tGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGTCTTTACCGTCTGCAACAGGGTGGCATTGACGTCGGCCGCGGcc      >  1:364524/1‑143 (MQ=255)                                                                                                                                           tCGTACGCCACCGTGCTGTGGCGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtga   <  1:245269/143‑1 (MQ=255)                                                                                                                                            cGTACGCCACCGTGCTGGGACGCACTCATCGCCGCCGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGCCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtgat  <  1:679957/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                             AGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGAT  >  NC_000913/433553‑433834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.