New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	433694 =	41 (0.900)	4 (0.090)	3/250	NT	9.8%	coding (240/1104 nt)	ribD	fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase
	?	NC_000913	433734 =	35 (0.810)					coding (280/1104 nt)	ribD	fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase

GGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAG  >  NC_000913/433593‑433874                                                                                                                                              |                                                                                                                                             atcaggccgtggctgacgtcaatgccagcctgttgcagacggtaaagtccacgcccagcgacctgcgggttaggatcttgcatcgaggcaaccacgcgcgcTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAgc                                                                                                                                             >  1:118641‑M1/102‑143 (MQ=255)  gTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGACGCGGGCGTAgcg                                                                                                                                            >  2:527787/1‑143 (MQ=255)         acaTGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCAATCATGGTCGTACGCCACCGCGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCTTgg                                                                                                                                     >  2:584732/1‑143 (MQ=255)            tGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTg                                                                                                                                  >  1:501189/1‑143 (MQ=255)               cGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTCCGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCt                                                                                                                               <  1:464108/143‑1 (MQ=255)                 aaGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCTCTGGCGTAGCGCGCGCGGTTGCCtac                                                                                                                             >  2:820162/1‑141 (MQ=255)                   gTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGAAGGACCGCCTGTGTCACACTCGAACCGTGTAGCAATCCTGGTCGTACGCCGCCGTGCTGGGACGCACTCATCGCCACTGGCGCAGCGCGCGCGGTTGCCTCGAt                                                                                                                           >  2:317973/1‑143 (MQ=255)                    tACACGCGTTGCGTATGGCGGGTGAAAAAGCCCAAGGTGCGACCGCCTACGTCACACTCGAACCCTGTAGCCATGACGGCCGTGCGCCACCGCGCGGTGATGCACGACTCGCAGCTGGAGCAGCGCGCGCGGTTGCCTCGaag                                                                                                                          >  2:657784/1‑141 (MQ=255)                       acGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCaa                                                                                                                       >  1:819495/1‑143 (MQ=255)                              gCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCACGCGTGGGTGCCTCGATGAAAGagacta                                                                                                                >  2:679957/1‑138 (MQ=255)                               cttATGGCCGGTGAGACAGCCAGAGGTGCTGCCGCCTATGTCACACTCGCACCCAGTAGCCATCATGGTCGGACGCCGCCGTGCTGTGACGCACTCATCGCAGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGAACCTaa                                                                                                               <  2:419313/141‑1 (MQ=255)                               cGTATGGCGGGTGACAAAGCCAAAGGTGTGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTaa                                                                                                               <  2:157387/143‑1 (MQ=255)                                 tATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAAcc                                                                                                             >  1:174034/1‑143 (MQ=255)                                           gAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGc                                                                                                   <  1:858795/143‑1 (MQ=255)                                                atccAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGc                                                                                              <  1:722322/141‑1 (MQ=255)                                                  ccAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGATGGCGTAGCGCGCGTGGTTGCATCGATGAAAGAGCCTACCCCGCAGGCGGCTGGGCGt                                                                                            >  2:696826/1‑143 (MQ=255)                                                            gACCGCCTATGTCACACTCGACCCATGTGGCCTTCGTGGTCGTATGCTACGCGGCTGTGACGCACTCATCGTCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTAcc                                                                                  <  1:647487/143‑1 (MQ=255)                                                             aCCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGCTGCAAGATCCTAACCCGCAGGTCGCTGGGCGCGGACTTTAcag                                                                                 >  2:792406/1‑141 (MQ=255)                                                                gCCTATGTCACACCCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGTTTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCt                                                                              <  1:562872/143‑1 (MQ=255)                                                                 ccTATGTCACACTCGGTCCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTg                                                                             <  1:230507/143‑1 (MQ=255)                                                                  cTATGTCACACTGGTGCCCTGTTGCCATCGTGGTCGTACGCGACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGGGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGc                                                                            <  2:4874/143‑1 (MQ=255)                                                                    aTGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCaa                                                                          <  1:777210/143‑1 (MQ=255)                                                                      gTCACACGCGGACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTTACGCACTCATCGCCGCTGGCGTAGCGCGCGGGGTTGCCTCGATGCAAGATCCTACCCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACa                                                                        <  2:142638/143‑1 (MQ=255)                                                                       tCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGATGTGAAGCACTCATCGCCGCTAGCGTAGCGCGCGTGGTTACCTCGATGCAATATCCTAAACCGCAGGTCGCTGAGCGCGGAATTTACAGTGTGCACCac                                                                       >  2:125030/1‑142 (MQ=255)                                                                        cacaCTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAgg                                                                      <  2:734908/143‑1 (MQ=255)                                                                                 aCCCTGTATCCATCATGGTCGTACGCCCCCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTg                                                             <  1:59903/143‑1 (MQ=255)                                                                                      gTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGCGGCCTTTACCGTCTGCACCACGCTCGCATTGACGTc                                                        >  1:18835/1‑143 (MQ=255)                                                                                            agcctGGTCGCACGCGTCCGTGTTGTGCCGCAGTCATCTCCGCTGTCGTGGCGCGCGTGGTTGCCTCCATGCAAGATCCTAACCCGCAGGTCGCTGGGCTTGGACTTTACCGTCTGTAACAGGCTGGCATTGACGTCAGCCAc                                                  <  2:48260/139‑1 (MQ=255)                                                                                             tcatGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACg                                                 <  1:430772/143‑1 (MQ=255)                                                                                              cagggTCGTACGCCGCCGTGGTGTGGCGCACACATCACCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGAGCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACgg                                                <  1:557020/140‑1 (MQ=255)                                                                                                tGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGTCTTTACCGTCTGCAACAGGGTGGCATTGACGTCGGCCGCGGcc                                              >  1:364524/1‑143 (MQ=255)                                                                                                   tCGTACGCCACCGTGCTGTGGCGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtga                                           <  1:245269/143‑1 (MQ=255)                                                                                                    gctacgccagcggcgatgagtgcgtcacagcacggtggcgtaGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtgat                                          >  1:118641‑M2/43‑143 (MQ=255)                                                                                                    cGTACGCCACCGTGCTGGGACGCACTCATCGCCGCCGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGCCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtgat                                          <  1:679957/143‑1 (MQ=255)                                                                                                      tacgccagcggcgatgagtgcgtcacagcacggtggcgtaGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTCCCGTCCGCACCAGGCTGGCATTGACGTCAGCCACGgcctgacgc                                        >  2:668748‑M2/41‑140 (MQ=255)                                                                                                      tacgccagcggcgatgagtgcgtcacagcacggtggcgtaGCGCGCGTGGTTGCCTCGATGCAAGAACCTAACCCGCAGGTCGCTGGGCGTGGACACTACGGCCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCtgatga                                        >  2:531157‑M2/41‑143 (MQ=255)                                                                                                         gccagcggcgatgagtgcgtcacagcacggtggcgtaGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCacggccagaccatca                                     >  1:787515‑M2/38‑137 (MQ=255)                                                                                                                ggCTGTGACGCGCTCAGCGCCGCTGGCGTAGCGCGCGTGGTGGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGc                              <  1:62920/142‑1 (MQ=255)                                                                                                                   tgtgACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGa                           <  1:530674/143‑1 (MQ=255)                                                                                                                            cTCATCGCCGCTTGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGaa                  <  2:27965/143‑1 (MQ=255)                                                                                                                             tCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGGCGCGGGGCGTGGACTCTACCGACTGCAACACGCTGGCATTGACGTCAGCCACGGCCTGATGAGGAGTGAAGCCGAGCacgtgact                 >  2:432378/1‑136 (MQ=255)                                                                                                                                  gccgcTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAAtgacgg            >  1:390854/1‑138 (MQ=255)                                                                                                                                  gccgcTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAgg            >  1:531297/1‑143 (MQ=255)                                                                                                                                            taGCGCGCGTGGGTGCCTCGGTGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAg  <  2:241271‑M2/141‑1 (MQ=255)                                                                                                                                              |                                                                                                                                             GGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAG  >  NC_000913/433593‑433874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.