New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1914760 =	48 (1.060)	3 (0.070)	3/244	NT	6.5%	coding (57/2049 nt)	prc	tail‑specific protease
	?	NC_000913	1914786 =	42 (1.000)					coding (31/2049 nt)	prc	tail‑specific protease

AAATGCCTGATCGAGGTCGAACTGGCGATAATGAGAACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTGCGCGCACAATCAAAGACATACCCGAATTCAGCTGGACGCGGACGC  >  NC_000913/1914619‑1914900                                                                                                                                              |                                                                                                                                              caccgtattagaaatcaccaaagacggcgtccgcgtccagctgaattcgggtatgtctttgattgtgcgcgcagaacacctggtgttctgaaacggaggccgggccaggcatgaacatgttttttaggcttaccgcgttagCt                                                                                                                                              <  2:801440‑M1/2‑1 (MQ=255) caccgtattagaaatcaccaaagacggcgtccgcgtccagctgaattcgggtatgtctttgattgtgcgcgcagaacacctggtgttctgaaacggaggccgggccaggcatgaacatgttttttaggcttaccgcgttagCt                                                                                                                                              <  1:841164‑M1/2‑1 (MQ=255)  accgtattagaaattatcaaagacggcgtccgcgtccagctgaattagggtatgtcagtgattgtgcgcgcagaacacctggtgttctgaaacggaggccgggccaggcatgaacatgttttttaggcttaccgcgttagCTg                                                                                                                                             >  1:48829‑M1/141‑143 (MQ=255)  accgtattagaaatcaccaaagacggcgtccgcgtccagctgaattcgggtatgtctttgattgtgcgcgcagaacacctggtgttctgagacggaggccgggccaggcatgaacatgttttttaggcttaccgcgttagCTg                                                                                                                                             <  1:122709‑M1/3‑1 (MQ=255)      tcTGATCGAGGTCGAACTGGCGATAATGAGAACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCTGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCt                                                                                                                                         <  1:853667/142‑1 (MQ=255)      tattagaaatcaccaaagacggcgtccgcgtccagctgaattcgggtatgtctttgattgtgcgcgcagaacacctggtgttctgaaacggaggccgggccaggcatgaacatgttctttaggcttaccgcgttacCTGGCCt                                                                                                                                         <  2:340952‑M1/7‑1 (MQ=255)        ttagaaatcaccaacgacggcgtccgcgtccagctgaattcgggtatgtctttgattgtgcgcgcagaacacctggtgttctgaaacggaggccgggccaggcatgaacatgttttttaggcttaccgcgttagCTGGCCTGc                                                                                                                                       <  1:705902‑M1/9‑1 (MQ=255)         tagaaatcaccaaagacggcgtccgcgtccagctgaattcgggtatgtctttgattgtgcgcgcagaacacctggtgttctgaaacggaggccgggccaggcatgaacatgttttttaggcttaccgcgttagCTGGCCTGCt                                                                                                                                      <  2:861360‑M1/10‑1 (MQ=255)            cGAGGTCGAACTGGCGATAATGAGAACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATGAGCACGGGTGATATCTTCTACAGCGAAGGTCTGGCCTGCGAtt                                                                                                                                   >  2:327159/1‑143 (MQ=255)              aGGGCGAACTGCTCATAATGAGGCCGGGCGCAGCGCGACGTTACGCGCGCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGACCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGc                                                                                                                                 <  2:780947/143‑1 (MQ=255)                gTCGAACTGGCGATAATGAGAACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTCATACCGGAATTTGATCAGCACCCGCGAAATCTTCCACACCGAGGGTCTGGCCTGCCATTGcca                                                                                                                               >  1:200342/1‑141 (MQ=255)                   gAACTGGCGATAATGAGAACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCa                                                                                                                            <  1:848306/143‑1 (MQ=255)                   gAACTGGCGATAATGAGAACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCa                                                                                                                            <  1:173934/143‑1 (MQ=255)                       tGGCGATAATGGAAACCGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGcc                                                                                                                        <  2:208412/143‑1 (MQ=255)                        acggcgtccgcgtccagctgaattcgggtatgtctttgattgtgcgcgcagaacacctggtgttctgaaacggaggccgggccaggcatgaacatgttttttaggcttaccgcgttagCTGGCCTGCTATTGCAAGCAGGCCa                                                                                                                       >  1:95690‑M1/119‑143 (MQ=255)                         gCGATAATGAGAACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGcccg                                                                                                                      >  1:345901/1‑141 (MQ=255)                                 gagaACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAAcgcg                                                                                                              >  2:476596/1‑143 (MQ=255)                                   gaACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTTATACCGGTATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGTTCTGCACTGCTATTGCAAGCAGGCCAGCTAACGCggc                                                                                                            >  1:76542/1‑142 (MQ=255)                                       gggCGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGc                                                                                                        <  1:152921/143‑1 (MQ=255)                                             aGCGCTACGCTGCGCGCTCACTTACCGTCGCATGCTGCTTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTa‑aaa                                                                                                 <  1:308797/143‑1 (MQ=255)                                             aGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTa‑aaa                                                                                                 >  1:801440/1‑143 (MQ=255)                                               cgcgCCGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTa‑aaaaa                                                                                               <  1:669108/143‑1 (MQ=255)                                                 cgACGTTACGCGCTCACTTACCGGCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACa                                                                                             <  2:377121/143‑1 (MQ=255)                                                      ttACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCGAACGCGGTGAGCCTA‑AAAAACATGTTc                                                                                        >  1:422084/1‑143 (MQ=255)                                                       tACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTG‑AAAAGCATGTTCa                                                                                       >  1:761986/1‑143 (MQ=255)                                                            tcTCACTTACCCTCGCATGCTGCGTCTCTTCCTTTAATACCCGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCt                                                                                  <  1:823570/142‑1 (MQ=255)                                                            gcTCACTTACCGTCGCCGGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCt                                                                                  <  1:115578/143‑1 (MQ=255)                                                            gcTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGCATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCGGGCCGGCTAACGCGGTAAGCCTA‑AAAAACCTGTTCATGCCt                                                                                  >  1:115228/1‑143 (MQ=255)                                                                       gTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTc                                                                       >  2:386742/1‑143 (MQ=255)                                                                            aTGCCGCGTCTCTCCCGTGAATCCCGGAATTGCATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGttt                                                                  <  1:222566/143‑1 (MQ=255)                                                                                tgcGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTCCAGCGAAGGTCTGCCCTGCTATTGCGAGCAGGCCAGCTAACGCGGTTAGCCTC‑ACACACATGCTCTTGCCCGGCCGGCCCACCAGTTCAgg                                                              >  1:324766/1‑142 (MQ=255)                                                                                tgcGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGa                                                              <  1:29172/143‑1 (MQ=255)                                                                                 gcGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGaa                                                             <  1:617289/143‑1 (MQ=255)                                                                                    tctcTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAacac                                                          >  1:146144/1‑143 (MQ=255)                                                                                       ctTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTCCAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAg                                                       <  2:656234/143‑1 (MQ=255)                                                                                       ctTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCCGACCCCCAg                                                       >  1:730463/1‑143 (MQ=255)                                                                                         tgaaacggaggccgggccaggcatgaacatgttttttaggcttaccgcgttagCTGGCCTGCTATTGCAAGCAGGCCAGCTAAcgc                                                                                                               >  2:637817‑M1/54‑86 (MQ=255)                                                                                         tgaaacggaggccgggccaggcatgaacatgttttttaggcttaccgcgttagCTGGCCTGCTATTGCAAGCAGGCCAGCTAAcgc                                                                                                               <  1:637817‑M1/33‑1 (MQ=255)                                                                                          ccTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCCATCAATTCAT‑TACTTCTCTGGGCGGGCCTCCGTCTCAGAACACCAGgtg                                                    >  1:199482/1‑143 (MQ=255)                                                                                           cTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGgtgt                                                   <  1:250044/143‑1 (MQ=255)                                                                                            tttAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGCACACCAGGTGtt                                                  >  2:809188/1‑143 (MQ=255)                                                                                            tttAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGtt                                                  >  1:861360/1‑143 (MQ=255)                                                                                              tAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCt                                                >  2:684157/1‑143 (MQ=255)                                                                                              gagtACCGGAATTTGATCAGCACGCGTGATAGCGTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAACCATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCTGGTGTTCt                                                <  2:113594/140‑1 (MQ=255)                                                                                                aTACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTgc                                              <  1:625937/143‑1 (MQ=255)                                                                                                  aCCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTgcgc                                            <  1:476596/143‑1 (MQ=255)                                                                                                    cGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAAAGCGGTAAGCCTA‑AAAAACATGGTCATGCCTGACCCGGCCTCCGTTTCAGAACCCCAGGTGTTCTgcgcgc                                          >  1:58271/1‑143 (MQ=255)                                                                                                             ctCAGCACCGGTGATATCTTCTACAGCACAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTGTCAGAACACCAGGTGTTCTGCGCGCACAATCaaa                                 <  2:370700/142‑1 (MQ=255)                                                                                                              tCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCCAGCAGGCCAGCTAACGCGGTAAGCCTC‑AAAAACCTGCTCATGCCTGGCCCGGCCCCCGTTTCAGAACACCAGTCGCTCTGCGCCCACACTccacg                                >  2:752680/1‑139 (MQ=255)                                                                                                                                tctACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTGCGCGCACAATCACAGACATCCCCGCATTCAGCt              >  1:353975/1‑143 (MQ=255)                                                                                                                                 ctACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTCAAGAACACCAGCAGCTCAGCGAGCACAATCAATGCCATAGCAGAATTCAGCTg             >  2:378214/1‑143 (MQ=255)                                                                                                                                  tACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGT‑AGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTGCGCGCACAATCAAAGACATACCCGCATTCAGCTgga           >  1:852823/1‑143 (MQ=255)                                                                                                                                    cAGGGAAGGTCTGGCCTGCTATGGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTGCGCGCACAATCAAAGACATACCCGAATTCAGCTggac          <  2:76542/143‑1 (MQ=255)                                                                                                                                     aGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCATGGCGGGAGGTGCTTTTAAGAACACCAGATGTTCTGCGCGCACAATCAAAGACGTACCCGAATTCAGCGggacg         >  2:632500/1‑143 (MQ=255)                                                                                                                                      gCGAAGGTCTGGCCTGCTATTGCGAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTCTATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTGCGCGCACAATCAAAGACATACCCGAATTCAGCTggacgc        <  1:448244/143‑1 (MQ=255)                                                                                                                                      gCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTGCGCGCACAATCAACGACCTCCCCGCATTCAGCTggacgc        >  1:574331/1‑143 (MQ=255)                                                                                                                                       cGAAGGTCAGGGCTGCCATTGCAAGCAGGCGAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTGCGCGCACAATCAAAGACATACCCGAATTCAGCTggacgcg       <  2:828927/143‑1 (MQ=255)                                                                                                                                        gAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCCTGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGGGGTCTGCGCGCACCAACAAAGACCGACCCGAATTCAGCTggacgccg      >  2:512058/1‑141 (MQ=255)                                                                                                                                         aaGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAACACACGACCATGTTTGGTCCGGCCTCCGTTTCAGAACACCAGGTGTTCTGCGCGCACAATCAAAGACATACCCGAATTCAGCTggacgcgga     >  1:243964/1‑143 (MQ=255)                                                                                                                                            gTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTGCTGCGCGCACAATCAAAGACACACCCGAATTCAGCTggacgcggacgc  >  2:820761/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                              AAATGCCTGATCGAGGTCGAACTGGCGATAATGAGAACGGGTGAAGCGCGACGTTACGCGCTCACTTACCGTCGCATGCTGCGTCTCTTCCTTTAATACCGGAATTTGATCAGCACGCGTGATATCTTCTACAGCGAAGGTCTGGCCTGCTATTGCAAGCAGGCCAGCTAACGCGGTAAGCCTA‑AAAAACATGTTCATGCCTGGCCCGGCCTCCGTTTCAGAACACCAGGTGTTCTGCGCGCACAATCAAAGACATACCCGAATTCAGCTGGACGCGGACGC  >  NC_000913/1914619‑1914900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.