New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1922031	42 (0.920)	4 (0.090)	4/252	NT	9.1%	intergenic (+15/‑90)	yebV/yebW	protein YebV/protein YebW
	?	NC_000913	= 1922040	40 (0.920)					intergenic (+24/‑81)	yebV/yebW	protein YebV/protein YebW

AACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGAAGATATTGTTGTGGA  >  NC_000913/1921898‑1922182                                                                                                                                               |                                                                                                                                               aaCTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTCCCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATgg                                                                                                                                                >  1:274143/1‑143 (MQ=255)    tGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGcgg                                                                                                                                             >  1:723091‑M2/1‑140 (MQ=255)            tGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTAGTTg                                                                                                                                     >  1:640494/1‑143 (MQ=255)                atgagtaaaCCATGATCCATTCCATGCTAAATGGCGAACACTCTGTCCTGTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCt                                                                                                                                 <  1:597836/137‑1 (MQ=255)                  gCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTgg                                                                                                                               <  1:481136/143‑1 (MQ=255)                    tGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGtt                                                                                                                             >  1:405664/1‑143 (MQ=255)                       aaCCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATACGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTAtt                                                                                                                          >  1:608017/1‑143 (MQ=255)                        aCCAGTATCCCTGCCCTCCTAAAGGGCGATCACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTc                                                                                                                         <  2:74075/143‑1 (MQ=255)                               tCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGtt                                                                                                                  <  1:369583/143‑1 (MQ=255)                                                ggCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTaaa                                                                                                 <  1:286063/143‑1 (MQ=255)                                                ggCAAACACTCTGTCCCGTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATGATACGTCTTGCCTGATCCAAAAAGAACACGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTaaa                                                                                                 <  2:443253/143‑1 (MQ=255)                                                   gAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACtt                                                                                              >  1:470345/1‑143 (MQ=255)                                                   gAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGGCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTCATTTGTCCTGACTATTCCACCGAACTAAAATCTCCCCTAAACtt                                                                                              >  2:4169/1‑143 (MQ=255)                                                   gAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCATCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGGTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAAGtt                                                                                              >  1:336288/1‑143 (MQ=255)                                                    aaCACTCTGTCCTTTACCGTACCCGTTCCGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGGTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTa                                                                                             >  2:17737/1‑143 (MQ=255)                                                        ctctGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAACAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACgg                                                                                         <  1:522855/143‑1 (MQ=255)                                                         tctGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTACACTTAACGGt                                                                                        >  1:488289/1‑143 (MQ=255)                                                         tctGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTACCGGt                                                                                        >  1:643908/1‑143 (MQ=255)                                                               cTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGca                                                                                  >  1:816975/1‑143 (MQ=255)                                                                ttgaCCGTACCCGTTACGATCAACAATCTGATGCCGGGAGTAGGCGTCTTGCCTGGTCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTACACTTAACGGTACGGcac                                                                                 <  2:201846/140‑1 (MQ=255)                                                                gttACCCTACCTGTTACCAACAACAAGCGGATGCCTCGATTATGCTTCTCGCCTGATCCAAAAAGAACCCGTCGCCATGGCGGGTTATTTCTACTTATTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGcac                                                                                 <  2:488608/142‑1 (MQ=255)                                                                     cGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTGTCCTAAACTTAACGGTACGGCCCCacac                                                                            >  2:821540/1‑143 (MQ=255)                                                                          ccGTTACGATCAACAATCTGTTGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGATCCCGTCGGCATGGAGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCgg                                                                       <  2:604370/143‑1 (MQ=255)                                                                          ccGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCgg                                                                       <  1:671544/143‑1 (MQ=255)                                                                            gTTACGATACACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAAGCGCTCCTAAACTTAACGGTACGGCACCACACTTCgggg                                                                     <  2:816381/143‑1 (MQ=255)                                                                              tACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTACCACACCGCAAAACCGCTCCTAAACTGAACGGGACTGCACGACACTTAGGCGAt                                                                   >  2:770551/1‑143 (MQ=255)                                                                                 gATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGaa                                                                >  2:698764/1‑143 (MQ=255)                                                                                   tCAACAATCTGATGCCTAGACTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCCCACGTCGGGGATGaagt                                                              >  2:110799/1‑141 (MQ=255)                                                                                       caaTCTGATGCCGGGATTATGCGTCTTGCCTCTTCCAAAAAAAACCCGTCGGCATTGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTTAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTc                                                          <  1:588250/143‑1 (MQ=255)                                                                                       caaTCTGATGCCCGCATTACGCGTCTTGCCTGATCCAAAAAGACCCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTc                                                          <  1:27578/143‑1 (MQ=255)                                                                                           cTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCAGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCgcgc                                                      >  2:449820/1‑143 (MQ=255)                                                                                                       ttATGCGTCTTGCCTGTTCCAAAAAGAACCTGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCTCCTGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGTGATGAAATGTTCGCGCTGGTACTTtttg                                          <  2:222867/143‑1 (MQ=255)                                                                                                                   ccTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACGTTTTGTTTGCTGCCtag                              >  2:726520/1‑141 (MQ=255)                                                                                                                    cTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTGCGTGTGCTACGTggg                             >  1:327582/1‑142 (MQ=255)                                                                                                                        tCCAAAAAGAACCCGTCGGCATGGcgggttctttttggatcaggcaagacgcataatccaggcatcagattgttgatcgtaacgggtacggtaaaggacaga                                                                  <  2:198416‑M2/102‑79 (MQ=255)                                                                                                                        tCCAAAAAGAACCCGTCGGCATGGcgggttctttttggatcaggcaagacgcataatccaggcatcagattgttgatcgtaacgggtacggtaaaggacaga                                                                  >  1:198416‑M2/1‑24 (MQ=255)                                                                                                                         ccAAAAAGAACCCGTCGGGATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCg                        <  2:843627/143‑1 (MQ=255)                                                                                                                           aaaaaGAACCCGTCGGCATGGcgggttctttttggatcaggcaagacgcataatccaggcatcagattgttgatcgtaacgggtacggtaaaggacagagtgttcgccatttagcagggcagggatactggtttcagcatccc                      <  1:671471‑M2/143‑123 (MQ=255)                                                                                                                           aaaaaGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGt                      >  1:641596/1‑143 (MQ=255)                                                                                                                            aaaaGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGtt                     <  1:606545/143‑1 (MQ=255)                                                                                                                              aaGAACCCGTCGGCATGGcgggttctttttggatcaggcaagacgcataatccaggcacccgattgttgatcgtaacgggtacggtaaaggccagagtgttcgccatttagcagggcagggagactggtttcaccatccccgc                   <  2:344711‑M2/143‑126 (MQ=255)                                                                                                                                gAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGa                 <  1:516727/143‑1 (MQ=255)                                                                                                                                  aCCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTCGTGAAg               >  1:840647/1‑143 (MQ=255)                                                                                                                                  aCCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGAACCACACTTCGGGGCTCAAATGTTCGCGCTGGTACTCTTTGTTGGCTACCTGGATGCCGGTGGTGAAg               >  2:295712/1‑143 (MQ=255)                                                                                                                                    ccGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGAAGat             >  1:719041/1‑143 (MQ=255)                                                                                                                                        cGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGAAGATAttg         <  2:488289/143‑1 (MQ=255)                                                                                                                                          tcagggCGGGTTATTTGTCCTGGTTAGTCTCTCGTTGTAAAATCTCTCCTAAACTTATCGGTATGGCACTTCTTTTCTGTGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGAAGATAttgtt       <  1:322924/139‑1 (MQ=255)                                                                                                                                          gCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGAAGATAttgtt       <  1:703347/143‑1 (MQ=255)                                                                                                                                             tGGCGGGTTATTTGTCGTGGTTCTTCCCCCGTTGTAAAATCTCTCCTACACTTAACGGTACGGCACCACGCTGCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGAAGATATTGTtgtg    <  2:570173/143‑1 (MQ=255)                                                                                                                                               gCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGCTGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGCGAAGATATTGTtgtgaa  >  2:878087/1‑141 (MQ=255)                                                                                                                                               |                                                                                                                                               AACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCGGGGATGAAATGTTCGCGCTGGTACTTTTTGTTTGCTACCTGGATGGCGGTTGTGAAGATATTGTTGTGGA  >  NC_000913/1921898‑1922182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.