| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 745824 = | 27 (0.830) | 3 (0.100) | 3/254 | NT | 10.5% | coding (660/735 nt) | pxpA | 5‑oxoprolinase component A |
| ? | NC_000913 | 745854 = | 25 (0.800) | coding (690/735 nt) | pxpA | 5‑oxoprolinase component A | |||||
CGCGAAGCCAGTCAGGCGCGTTGATTGAAAACGAAGAACAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAGGCCCGGAGATC > NC_000913/745682‑745955 | cgcgAAGCCAGTCAGGCGCGTTGATTGAAAACGAAGAACAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGAc > 2:593254/1‑143 (MQ=255)cgcgAAGCCAGTCAGGCGCGTTGATTGAAAACGAAGAACAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGAc > 1:616452/1‑143 (MQ=255) gcgcAGCCTGGCAGGCGCGTTGATCGAACACGAAGAGCAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGGAGAGTCAAAATTAGCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACg < 2:558223/143‑1 (MQ=255) tttgatcgccgcctccaggttatccgctgcacggcggatctccgggccttcaggcatggtgatatccttttttcattctttattaatcggggttatgctgcgacaacaatccccttttcggcaaatgcagagcgtagtCGGCg < 1:498628‑M1/5‑1 (MQ=255) gCCGGTCAGGCGCGTTGATTGAGCACGTAGATTCGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAGAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAg < 2:345411/143‑1 (MQ=255) ttgattgaAAACGAAGAACAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGtt > 1:528165/1‑143 (MQ=255) ttgagtgaAAACCAAGAACAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCTCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGtt < 2:517829/143‑1 (MQ=255) attgaAAACGAAGAACAGGCGCTGGCGCAAGCGCTGGAGATGGGGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTcgc < 1:197903/143‑1 (MQ=255) tgaAAACGAAGAACAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCCGCGAATGGGCAACGGCCGCGGCGCAAACGGCCTGCCCGCCTGGCGCCGGCCACCCCGCGCTGGCGCTcgccg > 2:305606/1‑142 (MQ=255) gaAAACGAAGAACAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTcgcccg > 1:122991/1‑143 (MQ=255) aaaCGAAGAACAGGCGCTGGCGCAAACGCTGGAGGTGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTcgcccgcc < 2:162682/143‑1 (MQ=255) gcacggcggatctccgggccttcaggcatggtgatatccttttttcattctttattaatcggggttatgctgcgacaacactccccttttcggcaaatgcagagcgtagtCGGCGAGCACGCACTGGCGTTCGCCCGCCGACt > 1:541877‑M1/111‑143 (MQ=255) gaaCAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCAAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGGTCGCCCGCCGACTACg > 1:241911/1‑143 (MQ=255) ggagcgggCGAAAACGCTGGAGATGGTGCGACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTg < 2:237696/137‑1 (MQ=255) gtccccgggccttcgggcatggtgatatccttttttcattctttattaatcggggttatgctgcgacaacaatccccttttcggaaaatgcagagcgtagtCGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGc > 1:54444‑M1/102‑143 (MQ=255) ccgggccttcaggcatggtgatatccttttttcattctttattaatcggggttatgctgcgacaacaatccccttttcggcaaatgcagagcgtagtCGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCAttt > 1:82460‑M1/98‑143 (MQ=255) gcgcAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGc < 2:37637/143‑1 (MQ=255) gCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAgg > 1:71764/1‑143 (MQ=255) tGCAACACGGCAGAGTCAAAAGTATCACCGGCGACTGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCTCGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTc > 1:239208/1‑143 (MQ=255) tCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCCCTGCATTTGCCGAAAACGGGATGGGTGTCGCAGCATAAgcccca > 2:37111/1‑141 (MQ=255) cAACAGTATCACCGGCGAGTGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGAt < 1:63135/143‑1 (MQ=255) cACCGGCGAATGGGCAACGGTCGCGGCGCATCCGGTCTTCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGa < 1:436351/143‑1 (MQ=255) ccGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCGGCCGGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGCTTAATCAAGAAt > 1:476512/1‑143 (MQ=255) cGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTACATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGaaa > 2:599359/1‑143 (MQ=255) gAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACACCGCGCTGCATTTGCTGAGAAGTTGATCGTTGTCGCAGCATAACCCCGCTTAATAAAAAATGaaaa > 1:329330/1‑143 (MQ=255) aggcgtccGGTCGGGCCGCAAACGGTTGGCCTGCAGGTGGACGGAGTGCCGTCACGGTGGTTCGCTCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAg < 2:285141/136‑1 (MQ=255) gCAACGGTCGCGGCGCAAACGGTCTTCCTGCATGGCGACAGCGAGCACGCACTGCCGTTCGCCCGCCGACTACGGCATGCATTTGCCAAAACGGGCAATGTTATCGCCGCATACACCCGCTTAATACAGAATAaaaagaagaa > 2:1376/1‑137 (MQ=255) ggcgCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAACGGGGATTGTTGTCGCAGCATAACCCCGGTTAATAAAGAATGAAAAAAGGATCTCACCATGcc > 1:348357/1‑143 (MQ=255) acaCGGGCTGCGTGCATGGAAACTTCTAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAg < 1:606237/141‑1 (MQ=255) aaaCCGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCAAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAg < 1:90325/143‑1 (MQ=255) aaCGGGCGGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGTCGAAAAGAGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAgg < 1:30223/143‑1 (MQ=255) agcgtgcATCGCGACGGCGGGCACGCACGGGCGATCACGAGAGAACCACGCTCGGCATTAGACGAAAATGAAAAAGATGTGGTAGCCCACCTCCGATTAAAAAAAAAAGAAAAAAGGATATCACCATGCCTGAAGGCCCGgag < 2:633266/139‑1 (MQ=255) cctgcATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAGGGGGCCTGTTGTCGCAGCATAACCCCGATCAATAAAGAATGAAAAAAGGATATCACCATGCCTGACAGCCCAGAGAt > 2:186417/1‑143 (MQ=255) ctgcATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTCGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAGGCCCGGAGATc > 2:563100/1‑143 (MQ=255) | CGCGAAGCCAGTCAGGCGCGTTGATTGAAAACGAAGAACAGGCGCTGGCGCAAACGCTGGAGATGGTGCAACACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAACGGTCGCGGCGCAAACGGTCTGCCTGCATGGCGACGGCGAGCACGCACTGGCGTTCGCCCGCCGACTACGCTCTGCATTTGCCGAAAAGGGGATTGTTGTCGCAGCATAACCCCGATTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAGGCCCGGAGATC > NC_000913/745682‑745955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |