| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 86076 | 29 (0.890) | 3 (0.100) | 3/256 | NT | 9.7% | coding (447/1725 nt) | ilvI | acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit |
| ? | NC_000913 | = 86085 | 28 (0.890) | coding (456/1725 nt) | ilvI | acetolactate synthase/acetohydroxybutanoate synthase, catalytic subunit | |||||
ACCTCGTTGATAGGTTACGATGCCTTTCAGGAGTGCGACATGGTGGGGATTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTATGCGTTCTTACAATCCCACTACTACCGGACATAAAGGGCAAATTA > NC_000913/85942‑86218 | aCCTCGTTGATAGGTTACGATGCCTTTCAGGAGTGCGACATGGTGGGGATTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTgg < 1:26270/143‑1 (MQ=255) cTCGTTGATAGGTTACGTTGTCTTTCAGTTGTGCGAGATGGTGGGGATTTCGCGATCGGTGGTTAAACACAGTTGTCTGGGTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGTTTTTCTGGCTGGCGGCAAGTGGTc > 2:166477‑M2/1‑142 (MQ=255) tGATAGGTGACGAGGCCGTTCAGGAGTGCGACATGGTGGGGAGTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGAAGGTGCTGAAAAAGGCTTTCTGGCTGGCGaccacttgccgccag < 2:390487‑M1/143‑16 (MQ=255) ttACGACGCCTTTCGGGAGGGCGACATGGTGGGGGTTTCGCGACCGGTGGTTAAACAGAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCag < 2:644050/143‑1 (MQ=255) cGATGCCTTTCAGGAGTGCGACATGGTGGGGATTACGCGCCCGGTGGTTAAACACAGTTTTCTGGTTAGGTTAGCGGAAGACATTCCGCAGGCGCTAACACAGACTTGCTGGCTGGCGCCAAGGGCTCGCCCAGGAcccgacc > 2:524273/1‑138 (MQ=255) ccTTTCAGGAGTGCGACATGGTGGGGATTTCGCGACCGGTGGTTAAGCACAGCTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGtt < 1:239513/143‑1 (MQ=255) cTTTCAGGAGTGCGACATGGTGGGGATTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGCAAAAAGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTg > 1:641197/1‑143 (MQ=255) gctaCATGGTGGGGATTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGGAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGaaa < 2:508179/140‑1 (MQ=255) aCATGGTGGGGATTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGCAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGCTTGACCGCAAggt > 2:567734/1‑141 (MQ=255) tggtggGGCTTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGTCGACATGCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATAtt < 2:559949/143‑1 (MQ=255) gggAGTTCGCGGCCGGGGTTTAACCACAGTTTTCTTGATAAGCAAACGGAAGAGATTCCGCAGGTGCTGAAAAAGGTTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTaa < 2:69454/143‑1 (MQ=255) tCGCGACCGGTGGTTACACTCAGTTTTGTGGTTAAGCAAACGGAAGACATTCCGCTGGTGCTGAAAAAGGTTTTCTGGTTGGCGGCAAGTGGGCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGc < 2:108040/143‑1 (MQ=255) gcgACTGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGa < 1:647090/143‑1 (MQ=255) gtggtTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAGAGGTATTCTTAATCGGGCGAACAAAtt > 1:53503/1‑143 (MQ=255) aaCACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAACTTACCCTAt > 1:502479/1‑143 (MQ=255) acacAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATg > 2:647003/1‑143 (MQ=255) cacaGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAATGGTCGCCCAGGACCAGTAGTCGTTGATGTGCCGAAAGACATTCTTGATCCGGCGAACAAATTACGCGATGt > 2:368382/1‑143 (MQ=255) tttCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGcc > 1:523347/1‑143 (MQ=255) ttCTGGTGAAGAAAGCGGAAGACAGCCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAACATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCg < 1:208188/143‑1 (MQ=255) tGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAg > 2:429979/1‑143 (MQ=255) gtAAGCAAGCGGAAGACATTCCGCGGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGGCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCg < 2:520652/142‑1 (MQ=255) gCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCa < 1:586380/143‑1 (MQ=255) gtaaagcATTCAGCAGGCGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTATGc < 1:256253/137‑1 (MQ=255) aggACATTCCGCAGGTCCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTATGCGt < 2:608728/141‑1 (MQ=255) aaGACCTGCCGCGGGTGCTGAGAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTATGCGt < 2:456283/143‑1 (MQ=255) aaGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTATGCGt > 1:618767/1‑143 (MQ=255) gACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGGTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTACGCGTTc > 2:207161/1‑143 (MQ=255) aTTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCCAGTGGTCGCCCAGGACCAGTACTCGTTGCTTCACCGAAAGCTATTCTTAATCCGGCCAACAACTTACCAGATGCCCGGCCGGAGCCGGTCCGTAAGCCTTCtca > 2:481398/1‑141 (MQ=255) gtgcggaGGGGCTGAAGAAGGCTTTCTGGCTGGCGGCAAGTCGTCGCCCAGGACCAGTAGTCGTTGATTTATCGAAAGAGATTCTTAATCCCGCGAACAAATTACTCTATGTCTGGCCGGAGTCGGTCAGTATGCGTTCTTAc < 1:188176/137‑1 (MQ=255) gCTGAACAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGCAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATTTCTGGCCGGAGTCGGTCAGTATGCGTTCTTACAATCCCacta < 1:60147/143‑1 (MQ=255) gAAAAAGGCTTTCTGGCTGGCGaccacttgccgccagccagaaagccttt > 1:384084‑M1/1‑22 (MQ=255) gAAAAAGGCTTTCTGGCTGGCGaccacttgccgccagccagaaagccttt < 2:384084‑M1/50‑29 (MQ=255) aaaGGCTTTCTGGCTGGCGGCAAGTGGTcgccagccagaaagcctttttc > 1:384084‑M2/1‑28 (MQ=255) aaaGGCTTTCTGGCTGGCGGCAAGTGGTcgccagccagaaagcctttttc < 2:384084‑M2/50‑23 (MQ=255) cTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTATGCGTTCTTACAATCCCACTACTACCGGACAt > 1:131116/1‑143 (MQ=255) ctggcGGCAAGTGGTcgccagccagaaagcctttttcagcaccttcggaatgtcttccgtttgcttaaccagaaaactgtgtttaaccaccggtcgcgaactccccaccatgtcgcactcctgaacggcctcgtcacctatca < 2:390487‑M2/143‑129 (MQ=255) gaccacttgccgccagccagaaaaactttttcagcacctgcggaatgtcttccgtttgcttacccagacaactgtgtttaaccaccgatcgcgaaatccccaccatctcgcacaactgaaagacaacgtaacctatcaacgag > 2:166477‑M1/1‑1 (MQ=255) | ACCTCGTTGATAGGTTACGATGCCTTTCAGGAGTGCGACATGGTGGGGATTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTATGCGTTCTTACAATCCCACTACTACCGGACATAAAGGGCAAATTA > NC_000913/85942‑86218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |