| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2884559 = | 55 (1.200) | 6 (0.140) | 4/254 | NT | 10.6% | coding (2661/2667 nt) | cas3 | CRISPR‑associated endonuclease/helicase Cas3 |
| ? | NC_000913 | 2884597 = | 48 (1.090) | coding (2623/2667 nt) | cas3 | CRISPR‑associated endonuclease/helicase Cas3 | |||||
GTAGTTTTTCTGAAGTAGTAGATGAAGATGGGTTACTTTGGCTGGAAGGGAAACAGAATCTGGATGGATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2884704‑2884559‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGATTAAG > NC_000913/2884597‑2884738 GTAGTTTTTCTGAAGTAGTAGATGAAGATTAGCTTCGTTTGTTGGAAGGGAAACAGAATCTGGATGGATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAAT < 1:861115/143‑1GTAGTTTTTCTGAAGTAGTAGATGAAGATGGGTTACTTTGGCTGGAAGGGAAACAGAATCTGGATGGATGGGTCTGGCAGGGTACCAGTATTGTTATTACCTCTACCGGGGCTGAAGAGATGACCAGAGTCATCCCTGCAAAT > 1:173710/1‑143 AGTTTTTCTGAAGTAGTAGAGGAAGATGGGTTACTTGTGCTGGAAGGGAAACAGAATCTGGATGGATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCC < 1:291318/143‑1 TAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGCGTCATACCTGCAAATCCCATGTATAGGTAATAACAATACTGTTACACTACCAGACCCATCCATCCAAATCCTGATTCACTCCCAGCCAAAGTAACCC > 2:200356/1‑143 TAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCC > 1:731393/1‑143 TTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCAT > 2:414455/1‑143 AGGGGATGAAGGGATGACCAGAGTCATCCCTTC‑‑ATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCCTCCCGCCAAAGTAACCCATCTTCATCTACTACTTCACTAAAAC > 2:628720/1‑143 GGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCCGATTGTGTTTGCCTTCCAGCCACAGTAACCCATCTTCATCTACTCCTTAAGAAAAAC > 2:840909/1‑143 GGGATGACCAGAGTCATCCCTTC‑‑ATCCCCTGTATAGGTAATAACAATACTGTTCCCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTCCTTCAGAAAAACTCCGTTTCCA > 2:523166/1‑143 TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAGAGGTACATTGACGCGATg > 1:347895/1‑142 CCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCACCGTAACCCATCTTCATCTCCTACTTCAGAAACACTACGTTTCCAGGTGAAAGGCACATTGACGCcactac > 2:298361/1‑137 CCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATCCTGTTTCCCTTCCAGCCAACGTAACCCATCTTCATCTACTACTTCAGACAACCTACGCTTCCAGGTGCAGGGTACATTGCCCCGATGAA > 2:131655/1‑143 CCTGTATAGGTAATAACAATACTGTTACCCGGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATTTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGATTAAG < 1:474039/143‑1 GTAGTTTTTCTGAAGTAGTAGATGAAGATGGGTTACTTTGGCTGGAAGGGAAACAGAATCTGGATGGATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2884704‑2884559‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGATTAAG > NC_000913/2884597‑2884738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |