New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2884559 =	55 (1.200)	6 (0.140)	4/254	NT	10.6%	coding (2661/2667 nt)	cas3	CRISPR‑associated endonuclease/helicase Cas3
	?	NC_000913	2884597 =	48 (1.090)					coding (2623/2667 nt)	cas3	CRISPR‑associated endonuclease/helicase Cas3

AAAATATTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAA  >  NC_000913/2884417‑2884700                                                                                                                                               |                                                                                                                                              taaaTATTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGAACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTACCGGCATTGACAACACTAATTCCCGAAGTTATTTg                                                                                                                                               >  1:853521/2‑143 (MQ=255) cttaatcgcgtcaatgtacccttcacctggaaacgtagtttttctgaagtagtaaatgaagatgggttactttggctggaagggaaacagaatctggatggatgggtctggccgggtaacagtattgttattacctatacagg                                                                                                                                               <  1:474039‑M1/1‑1 (MQ=255)  ttcatcggggcaatgtaccctgcacctggaagcgtaggttgtctgaagtagtagatgaagatgggttacgttggctggaagggaaacaggatctggatggatgggtctggcagggtaacagtattgttattacctatacaggg                                                                                                                                              >  2:131655‑M1/142‑143 (MQ=255)  gtagtggcgtcaatgtgcctttcacctggaaacgtagtgtttctgaagtaggagatgaagatgggttacggtggctggaagggaaacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacaggg                                                                                                                                              >  2:298361‑M1/142‑143 (MQ=255)    catcgcgtcaatgtacctctcacctggaaacgtagtttttctgaagtagtagatgaagatgggttactttggctggaagggaaacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGa                                                                                                                                            >  1:347895‑M1/140‑143 (MQ=255)          aTACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTTTTATCCTCATTGCTACCACTCATTCCCGAAGTTATTTGGGATTTGCa                                                                                                                                      >  1:83735/1‑143 (MQ=255)          aTACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCa                                                                                                                                      >  2:868014/1‑143 (MQ=255)           tACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGCAGATGTCCATTGTGCACCTTCCCTACTTAATTAGGGCTAACTTGAAAGTGGTCTTATTATCGTCTTTGTTCACACTCATTCCCGAAGTTATTTGCGAATTGCac                                                                                                                                     >  1:336910/1‑142 (MQ=255)           tACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTCCAg                                                                                                                                     >  2:195892/1‑143 (MQ=255)           tACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGAAATACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAg                                                                                                                                     <  1:288699/143‑1 (MQ=255)               tggtatatAAAATCTTATATCAGGAATTTAAAGGAAGATGTACAGTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGGCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGAt                                                                                                                                 <  1:255168/139‑1 (MQ=255)               gtgAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGAt                                                                                                                                 <  2:568044/143‑1 (MQ=255)                tgAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATg                                                                                                                                >  1:442819/1‑143 (MQ=255)                 gAATATAAAAGCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGa                                                                                                                               <  1:385440/143‑1 (MQ=255)                   atatAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATAATTCCGGAAGTTATTTTGGATTTGCAGGGTGGAct                                                                                                                             >  2:850277/1‑143 (MQ=255)                    tataAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGActc                                                                                                                            <  2:373407/143‑1 (MQ=255)                        aaaTCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGt                                                                                                                        <  2:653414/143‑1 (MQ=255)                         aaTCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTc                                                                                                                       <  1:608801/143‑1 (MQ=255)                            tggaaacggagtttttctgaaggagtagatgaagatgggttactttggctggaagggaaacagaatctggatggatgggtctggcaggggaacagtattgttattacctatacagGGGAT‑‑GAAGGGATGACTCTGGTCATccc                                                                                                                  >  2:523166‑M1/116‑143 (MQ=255)                             tcATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATcc                                                                                                                   >  1:605822/1‑143 (MQ=255)                                 aCCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTc                                                                                                               <  2:865277/143‑1 (MQ=255)                                   cGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCAt                                                                                                             <  1:54180/143‑1 (MQ=255)                                      gtttttcttaaggagtagatgaagatgggttactgtggctggaaggcaaacacaatcgggatggatgggtctggcagggtaacagtattgttattacctatacagGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATccc                                                                                                          >  2:840909‑M1/106‑143 (MQ=255)                                      gttttagtgaagtagtagatgaagatgggttactttggcgggaggggaaacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGAT‑‑GAAGGGATGACTCTGGTCATCCCTTCATCCCCt                                                                                                        >  2:628720‑M1/106‑143 (MQ=255)                                           tAAAAGAAGATGTACATTGTGCATCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGta                                                                                                     <  1:782643/143‑1 (MQ=255)                                             aaaGAAGTTGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGtata                                                                                                   <  2:813834/143‑1 (MQ=255)                                              aagaagATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAg                                                                                                  <  1:722433/143‑1 (MQ=255)                                                  agaTGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGtaa                                                                                              >  1:266072/1‑143 (MQ=255)                                                     tGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGtaataa                                                                                           <  1:271417/143‑1 (MQ=255)                                                      gTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAAc                                                                                          >  2:440761/1‑143 (MQ=255)                                                      gTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAAc                                                                                          >  1:187736/1‑143 (MQ=255)                                                        atgaagatgggttactttggctggaagggaaacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACaa                                                                                        >  2:414455‑M1/88‑143 (MQ=255)                                                        aCATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGAGTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACaa                                                                                        <  2:171587/143‑1 (MQ=255)                                                           gtgtgCTCCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATAc                                                                                     <  2:18053/142‑1 (MQ=255)                                                            tgtgCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACt                                                                                    <  2:442819/143‑1 (MQ=255)                                                                gggttactttggctgggagtgaatcaggatttggatggatgggtctggtagtgtaacagtattgttattacctatacatGGGATTTGCAGGTATGACGCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTa                                                                                >  2:200356‑M1/80‑143 (MQ=255)                                                                gggttactttggctggaagggaaacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTa                                                                                >  1:731393‑M1/80‑143 (MQ=255)                                                                 tttatCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGCGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATCCCGTTAc                                                                               >  2:177371/5‑143 (MQ=255)                                                                 aCCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATCACAATACTGTTAc                                                                               >  2:504276/1‑143 (MQ=255)                                                                  ccTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTGTCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCATTAATCCCCTGTATAGGTAATAACAATACTGTTAcc                                                                              >  2:243624/1‑143 (MQ=255)                                                                    ttCCCTACTTGAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCt                                                                            <  2:659106/143‑1 (MQ=255)                                                                    gtCCCTCCTTAAGTTGGGAGAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGGCTCTGGTCATCCCTTCATCCCCTGTAGAGGTAATAACAATACTGTTACCCt                                                                            <  2:470610/142‑1 (MQ=255)                                                                      cccTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGc                                                                          >  1:558366/1‑143 (MQ=255)                                                                        cTACTTAAGTAGGGATAAACAGTTATTGGTTTTTTTATGGTAGGGGGGAACAATCATTACTGATGTTCTTTGTGATTTGCAGGGATGCCTCTTGTCATCCCCTCATCCCCTGTCTCGGTCCTACCAATACCGTTACCCTcccc                                                                        >  2:649987/1‑142 (MQ=255)                                                                         tACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCACGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAAGACTGTTACCCTGCCAg                                                                       >  2:132082/1‑143 (MQ=255)                                                                             tAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCAGTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGAccc                                                                   <  1:26631/143‑1 (MQ=255)                                                                                    ggATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGCCCcatccatc                                                            >  1:402945/1‑143 (MQ=255)                                                                                        aaaCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGa                                                        <  1:399588/143‑1 (MQ=255)                                                                                          aCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCTTGTATGCCTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGAtt                                                      >  1:865985/1‑143 (MQ=255)                                                                                                        tattatCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCa                                        <  1:61396/143‑1 (MQ=255)                                                                                                          ttatCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGc                                      >  1:157456/1‑143 (MQ=255)                                                                                                          ttatCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGc                                      >  1:399908/1‑143 (MQ=255)                                                                                                            atCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATATCAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCa                                    <  1:227463/143‑1 (MQ=255)                                                                                                             tCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCaa                                   >  1:370838/1‑143 (MQ=255)                                                                                                              cGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCaaa                                  <  1:802044/143‑1 (MQ=255)                                                                                                                  aTTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTaa                              <  2:26871/143‑1 (MQ=255)                                                                                                                      aTAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCa                          <  1:178578/143‑1 (MQ=255)                                                                                                                       tAACGATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCCGCCAAAGTAAcccct                         >  1:270516/1‑141 (MQ=255)                                                                                                                       tAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTAGTCATCCCTTCATCCCCTGTATCGGTAATAACAATACTGTTACCCTGCCAGACCCCTCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAGCCCAt                         >  1:843691/1‑143 (MQ=255)                                                                                                                       tAACAATCATTCCCGAAGTTATTTGGGATTTGCAAGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGACTCCGTTTCCCCTCCAGCCAAACTACCCCac                         >  2:185306/1‑142 (MQ=255)                                                                                                                        aaCAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATc                        <  1:868014/143‑1 (MQ=255)                                                                                                                         actaTCATTCCCGAAGTTATTTTGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCt                       <  2:83735/140‑1 (MQ=255)                                                                                                                           aaTCATTCCCGAAGTTATTTGGGATTTGCAGTGATGACTCTGGTAATCCCTTCATCCCCTGTATAGGTATTTAAAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTc                     >  1:127359/1‑143 (MQ=255)                                                                                                                                tttccGAAGTTATTTGGGATAGGCAGGGATGACTCTGGTCCTCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATcta                <  1:168261/140‑1 (MQ=255)                                                                                                                                 tCCCGAAGTTATTTGGGATTTGCAGTGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctac               <  1:850277/143‑1 (MQ=255)                                                                                                                                  cccGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGCTTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATccact              >  2:31959/1‑143 (MQ=255)                                                                                                                                             ttGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTGACCCCTCTTCATCTACTCCTTCCGaaaa   >  2:557779/1‑143 (MQ=255)                                                                                                                                              tGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGCAACCAGTCTTCATGTACTGCTGCAgcacaa  >  2:202010/1‑138 (MQ=255)                                                                                                                                               |                                                                                                                                              AAAATATTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAA  >  NC_000913/2884417‑2884700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.