New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 354605	NA (NA)	4 (0.090)	4/250	NT	NA	noncoding (6/28 nt)	other	REPt26a
	?	NC_000913	= 354653	NA (NA)					noncoding (13/36 nt)	other	REP26b

AAAAACGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACG  >  NC_000913/354463‑354746                                                                                                                                               |                                                                                                                                              aaaaaCGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGGCCAGATCCGCCAGGCAGTGGAAGAGGCGGGTATTGTCGCAt                                                                                                                                               >  2:44629/1‑143 (MQ=255)   aaaCGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGGAGGTTATTGTCGGGTgc                                                                                                                                             >  1:679721‑M1/1‑141 (MQ=255)        cgATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGAGCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGGAGCGTAGGGTATTGTCGGATgcgtcgc                                                                                                                                        >  2:52118‑M1/1‑136 (MQ=255)             tgaaaagaTGCGGCGCCGCATGCTCCAAGCGATTTGAGAAGGACGGGATCCTGGAGATCTGACGACCATTGAGGATCCGGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGt                                                                                                                                   <  1:807063/140‑1 (MQ=255)             cGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGt                                                                                                                                   <  1:333081/143‑1 (MQ=255)             cGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGt                                                                                                                                   >  1:653743/1‑143 (MQ=255)                aaggctgcggcGCCGGGCGTGCCAGGCGATGTGCGAGGGACGCGGTCCTGGAGATCTGCCGACCAGTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCa                                                                                                                                <  2:93754/138‑1 (MQ=255)                     tgctgcGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCgg                                                                                                                           <  2:89586/143‑1 (MQ=255)                             cgcACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGAACATTGATGATCATGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCTGTGCATTACGCACtgtat                                                                                                                   >  1:374124/1‑141 (MQ=255)                                  gATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCATCGCGCGGTGCATCCGGCACTGTGTGCCGa                                                                                                              >  1:439861/1‑143 (MQ=255)                                    tCCAGGCGGTTTGCGAAGGACGGGATCCTGGAGATCTGACGCCCATTGATGATCGTGCGTCGTTGGATCAGAGCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATg                                                                                                            <  2:514856/143‑1 (MQ=255)                                       gggggATTTGGGAAGGACGCGATCGTGGAGATCTGACGACGATTGATGAGCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCt                                                                                                         <  1:705669/139‑1 (MQ=255)                                         gCGAGTGGCGAAGGACGCGATCCGGGGGATCTGACGCCCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGa                                                                                                       <  1:904850/143‑1 (MQ=255)                                           gATTTGCGAAGGACGCGATACTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATAAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGACGATGCCtaaag                                                                                                     >  2:358261/1‑139 (MQ=255)                                              ttGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGA                                                                                                  <  1:485614‑M2/143‑1 (MQ=255)                                               tGCGAAGGACGCGATCCCGGAGATCTGACGCCCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCCGATgcgtcgcatcaggcatcggcacacagtgccggatgcaccgcgcgac                                                                                                 <  1:498862‑M1/143‑47 (MQ=255)                                                 cGAAGGCCGCGGTCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATgcgtcgcatcaggcatcggcacacagtgccggatgcaccgcgcgacgc                                                                                               <  2:664317‑M1/143‑49 (MQ=255)                                                   aaGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATgcgtcgcatcaggcatcggcacacagtgccggatgcaccgcgcgacgcat                                                                                             <  2:607396‑M1/143‑51 (MQ=255)                                                   aaGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTAGGATCTGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCTACGCGCTGTACATCCGGCACTGTGTGCCGAATCCTGATGCGACGCTg                                                                                             >  2:840371/1‑143 (MQ=255)                                                              ccTGGAGACCTGACGAGCATTGATGGTCCTGCGCCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATGGTCGGATgcgtcgcagcaggcatcggcacacagtgccggatgcaccgcgcgacgcatccgacaataac                                                                                  <  2:865757‑M1/143‑62 (MQ=255)                                                                tGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCa                                                                                <  1:770534/143‑1 (MQ=255)                                                                               cATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGa                                                                 >  1:721083/1‑143 (MQ=255)                                                                                aTTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATCCGACGCTGACGCGATGTATCACGCCTACGCACCTGaa                                                                >  2:508954/1‑143 (MQ=255)                                                                                  tgatgaTCCTGGGTCGTGGGATCAGATCCGTCAGCCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAAcc                                                              <  2:185292/143‑1 (MQ=255)                                                                                  tgatgaTCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGCTGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAAcc                                                              >  1:161823/1‑143 (MQ=255)                                                                                      gatCCTGCGTGGGGGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAg                                                          <  1:331491/143‑1 (MQ=255)                                                                                            gCGTCGTTGGATCAGATCCGACAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGa                                                    <  1:429499/143‑1 (MQ=255)                                                                                                        cAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTcgc                                        >  2:76629/1‑143 (MQ=255)                                                                                                          gATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGt                                      <  1:13217/143‑1 (MQ=255)                                                                                                            tCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCg                                    <  1:767487/143‑1 (MQ=255)                                                                                                             ccGCCAGGCGATGGAAGAGTATGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCCCGCGTCGc                                   >  2:555259/1‑143 (MQ=255)                                                                                                              tgCCAGGGGATGGGAGAGTAGTTTTTTGTCGGATGCGTCGCGCGTTGCATCCGGGACTGTGTGCCGATGCCTGATGGGACGCTGACGCGTTTTAGCATGCCGACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCa                                  <  1:364976/142‑1 (MQ=255)                                                                                                               gCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCAt                                 >  2:410411/1‑143 (MQ=255)                                                                                                                ccAGGCGATGGACGAGTAGTTTATTGTCGGATGCGTCGCGCGGTGCACCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATc                                <  1:493594/143‑1 (MQ=255)                                                                                                                 cAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCCGATAAGGCGCCCGCGTCGCATcc                               >  1:423172/1‑143 (MQ=255)                                                                                                                   ggCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGa                             >  1:357941/1‑143 (MQ=255)                                                                                                                           aaGAGGAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGc                     <  1:905700/143‑1 (MQ=255)                                                                                                                               gTAGGTTAGGGTCGGAGGCGTCGCGCGGTGCATCCGCCACTGTGTGCCGATGCCTGATGGGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAg                 <  1:361137/143‑1 (MQ=39)                                                                                                                                tAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCCTGCTCAGa                >  1:831071/1‑143 (MQ=255)                                                                                                                                tAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGAGAAGGCGCGCGCGTCGCATCCGACACCCTGCTCAGa                >  1:617736/1‑143 (MQ=255)                                                                                                                                  ggTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGCTGCCTGATGCGACGCTGACGCGTTTTATCATGCAAACGGACTTGGTCCTTAGGTCGGATAAGGCGCTCGCGTCGCATCCGGCACCCTGCTCAGATg              >  1:517148/1‑143 (MQ=255)                                                                                                                                   gTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGCTGCGACGCatccgaccataacctactcttccatcgcctggcggatctgatccaacggcgcaggaccatcaatgctcgtcaggtctccagg             <  2:865757‑M2/143‑83 (MQ=255)                                                                                                                                   gTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGt                                                            <  2:531010/96‑1 (MQ=255)                                                                                                                                   gTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGt                                                            >  1:531010/1‑96 (MQ=255)                                                                                                                                   gTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGc             >  1:839486/1‑143 (MQ=255)                                                                                                                                    ttATTGTCGGATGCGTCGCGCGTTGCATCCGGCCCTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGcc            <  2:517311/143‑1 (MQ=255)                                                                                                                                          tCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCCCGTCGTGTACGGCCCCCTGCTCAGATCCCTGATGc      >  1:566962/1‑143 (MQ=38)                                                                                                                                          tCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTCACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCGCCGGTGCCTGATGc      >  1:783227/1‑143 (MQ=255)                                                                                                                                              aTGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCatccgacaataacctactcttccatcgcctggcggatctgatccaacgacgcaggatcatcaatggtcgtcagatctccaggatcgcgtcctt  <  2:607396‑M2/143‑94 (MQ=255)                                                                                                                                               |                                                                                                                                              AAAAACGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACG  >  NC_000913/354463‑354746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.