New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 354605	NA (NA)	4 (0.090)	4/250	NT	NA	noncoding (6/28 nt)	other	REPt26a
	?	NC_000913	= 354653	NA (NA)					noncoding (13/36 nt)	other	REP26b

AAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTT  >  NC_000913/354513‑354794                                                                                                                                             |                                                                                                                                              aaGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTAGGATCTGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCTACGCGCTGTACATCCGGCACTGTGTGCCGAATCCTGATGCGACGCTg                                                                                                                                             >  2:840371/1‑143 (MQ=255)              tGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCa                                                                                                                                <  1:770534/143‑1 (MQ=255)                             cATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGa                                                                                                                 >  1:721083/1‑143 (MQ=255)                              aTTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATCCGACGCTGACGCGATGTATCACGCCTACGCACCTGaa                                                                                                                >  2:508954/1‑143 (MQ=255)                                tgatgaTCCTGGGTCGTGGGATCAGATCCGTCAGCCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAAcc                                                                                                              <  2:185292/143‑1 (MQ=255)                                tgatgaTCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGCTGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAAcc                                                                                                              >  1:161823/1‑143 (MQ=255)                                    gatCCTGCGTGGGGGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAg                                                                                                          <  1:331491/143‑1 (MQ=255)                                          gCGTCGTTGGATCAGATCCGACAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGa                                                                                                    <  1:429499/143‑1 (MQ=255)                                                      cAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTcgc                                                                                        >  2:76629/1‑143 (MQ=255)                                                        gATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGt                                                                                      <  1:13217/143‑1 (MQ=255)                                                          tCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCg                                                                                    <  1:767487/143‑1 (MQ=255)                                                           ccGCCAGGCGATGGAAGAGTATGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCCCGCGTCGc                                                                                   >  2:555259/1‑143 (MQ=255)                                                            tgCCAGGGGATGGGAGAGTAGTTTTTTGTCGGATGCGTCGCGCGTTGCATCCGGGACTGTGTGCCGATGCCTGATGGGACGCTGACGCGTTTTAGCATGCCGACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCa                                                                                  <  1:364976/142‑1 (MQ=255)                                                             gCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCAt                                                                                 >  2:410411/1‑143 (MQ=255)                                                              ccAGGCGATGGACGAGTAGTTTATTGTCGGATGCGTCGCGCGGTGCACCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATc                                                                                <  1:493594/143‑1 (MQ=255)                                                               cAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCCGATAAGGCGCCCGCGTCGCATcc                                                                               >  1:423172/1‑143 (MQ=255)                                                                 ggCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGa                                                                             >  1:357941/1‑143 (MQ=255)                                                                         aaGAGGAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGc                                                                     <  1:905700/143‑1 (MQ=255)                                                                             gTAGGTTAGGGTCGGAGGCGTCGCGCGGTGCATCCGCCACTGTGTGCCGATGCCTGATGGGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAg                                                                 <  1:361137/143‑1 (MQ=39)                                                                              tAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCCTGCTCAGa                                                                >  1:831071/1‑143 (MQ=255)                                                                              tAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGAGAAGGCGCGCGCGTCGCATCCGACACCCTGCTCAGa                                                                >  1:617736/1‑143 (MQ=255)                                                                                ggTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGCTGCCTGATGCGACGCTGACGCGTTTTATCATGCAAACGGACTTGGTCCTTAGGTCGGATAAGGCGCTCGCGTCGCATCCGGCACCCTGCTCAGATg                                                              >  1:517148/1‑143 (MQ=255)                                                                                 gTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGCTGCGACGCatccgaccataacctactcttccatcgcctggcggatctgatccaacggcgcaggaccatcaatgctcgtcaggtctccagg                                                             <  2:865757‑M2/143‑83 (MQ=255)                                                                                 gTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGt                                                                                                            <  2:531010/96‑1 (MQ=255)                                                                                 gTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGt                                                                                                            >  1:531010/1‑96 (MQ=255)                                                                                 gTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGc                                                             >  1:839486/1‑143 (MQ=255)                                                                                  ttATTGTCGGATGCGTCGCGCGTTGCATCCGGCCCTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGcc                                                            <  2:517311/143‑1 (MQ=255)                                                                                        tCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCCCGTCGTGTACGGCCCCCTGCTCAGATCCCTGATGc                                                      >  1:566962/1‑143 (MQ=38)                                                                                        tCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTCACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCGCCGGTGCCTGATGc                                                      >  1:783227/1‑143 (MQ=255)                                                                                            aTGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCatccgacaataacctactcttccatcgcctggcggatctgatccaacgacgcaggatcatcaatggtcgtcagatctccaggatcgcgtcctt                                                  <  2:607396‑M2/143‑94 (MQ=255)                                                                                              gCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCatccgacaataacctactcttccatcgcctggcggatctgatccaacgacgcaggatcatcaatggtcgtcagatctccaggaccgcggccttcg                                                <  2:664317‑M2/143‑96 (MQ=255)                                                                                               cGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGATGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTg                                               <  1:116597/143‑1 (MQ=255)                                                                                                gTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCatcggacaataacctactcttccatcgcctggcggatctgatccaacgacgcaggatcatcaatgggcgtcagatctccgggatcgcgtccttcgca                                              <  1:498862‑M2/143‑98 (MQ=255)                                                                                                 tgggtcgGTTCTTCCGGCTCTGTGTGCCGATGCCTGATGCGACCCTGTGCCGGTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGTTCAGATGCCTGATGCGACGCTGAc                                             <  2:594271/138‑1 (MQ=37)                                                                                                  cgcgcgGTGCATCCGGCACTGTGTGCCGATGCCTGATTCGACGCTGACGCGTTTTATCATGCCTACGGACCTGCACCGTAGCTCGGATAAGGCGCTCGCGTCGCATCCGACACCCTGCTCCGCTGCCTGATGCCACACTGAcg                                            >  1:870511/1‑143 (MQ=255)                                                                                                   gcgcgGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAcgc                                           >  1:575165/1‑143 (MQ=255)                                                                                                      cgtttcATCCGGCACTGTGTGCAGAAGCCGGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTc                                        <  1:670520/138‑1 (MQ=255)                                                                                                             tCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAg                                 <  1:412541/143‑1 (MQ=255)                                                                                                             tCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCCGACGCGTCTTATccg                                 >  2:336862/1‑141 (MQ=255)                                                                                                             tCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCACATGCCTGACGCGACGCTGACGCGACCTCTCAg                                 >  2:490253/1‑143 (MQ=38)                                                                                                                    cTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAcc                          <  1:132022/143‑1 (MQ=255)                                                                                                                     tgtgtgCCGACGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAccc                         <  1:87455/143‑1 (MQ=255)                                                                                                                       tgtgCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGCCGCTGACGCCTCCCATCAGGCCTAccccc                       >  2:401101/1‑141 (MQ=255)                                                                                                                         tgCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTg                     <  1:582574/143‑1 (MQ=255)                                                                                                                             ggtgctggATGCGACGCTGCCGCGGTTGATCATGCCTGCGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGtttt                 <  2:679721/136‑1 (MQ=38)                                                                                                                                 ccggATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTaca             <  2:478174/140‑1 (MQ=255)                                                                                                                                  cTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTacac            <  2:439861/143‑1 (MQ=255)                                                                                                                                   tGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACAcc           >  2:136715/1‑143 (MQ=255)                                                                                                                                       gCGACGCatccgacaataccctacgctcccatcgcctggcggatctgatccaacgacgcaggatcatcaatggtcgtcagctctccaggatcgcgtccttcgcaaatcgcctggatcgtgcggcgcagcatttttccggatcg       >  2:52118‑M2/1‑7 (MQ=255)                                                                                                                                        cGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATaa      >  1:896110/1‑143 (MQ=255)                                                                                                                                        cGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCACAGATGCCTGATTCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCgctta      >  1:292060/1‑139 (MQ=255)                                                                                                                                            gCacccgacaataacctcctcttccatcgcctggcggatctgatccaacgacgcaggatcatcaatggtcgtcagatctccaggatcgcgtccttcgcaaatcgcctggatcgtgcggcgcagcatttttccggatcgcgttt  >  1:679721‑M2/1‑2 (MQ=255)                                                                                                                                             |                                                                                                                                              AAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTT  >  NC_000913/354513‑354794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.