New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1885804	39 (0.850)	3 (0.070)	3/250	NT	7.4%	intergenic (+15/‑41)	yeaW/yeaX	carnitine monooxygenase subunit YeaW/carnitine monooxygenase subunit YeaX
	?	NC_000913	= 1885810	38 (0.880)					intergenic (+21/‑35)	yeaW/yeaX	carnitine monooxygenase subunit YeaW/carnitine monooxygenase subunit YeaX

AGAAAGGGCTGAAATCGCGTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAACCGATGGCAAAC  >  NC_000913/1885662‑1885941                                                                                                                                               |                                                                                                                                          aGAAACGGCTGACATCGCGTGGCTATCGGGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGG                                                                                                                                           <  1:158195‑M1/143‑1 (MQ=255)   aaaGGGCTGAAATCGCGTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTa                                                                                                                                         >  1:2260/1‑143 (MQ=255)      gggCTGGAGTCGCTGGGCTATCGTGGTCAGTGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATCTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTAttt                                                                                                                                      <  2:538733/143‑1 (MQ=255)               tCGCGTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATGATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGaaaataccgccgcc                                                                                                                             <  2:902441‑M1/143‑15 (MQ=255)                cgcgTGGCGAGCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTg                                                                                                                            <  1:888726/143‑1 (MQ=255)                  cgTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATGTTccgccgcgggg                                                                                                                          <  2:487522‑M2/143‑12 (MQ=255)                         aTCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGAttt                                                                                                                   >  1:44293/1‑143 (MQ=255)                          tCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCGTTTCCATAATCTGCTGGCGCAGGGGTTTAAGGACTAATGACATGGGCGGCGGTATTCTCCGCCGCCGGGCTGAtttt                                                                                                                  >  1:769390/1‑143 (MQ=255)                             tgctcctgggCGCAGCATGCCCGCCAGCAGCGGTAGTGGCATTTCCGCACATGGTATCGCCCATCTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGa                                                                                                               <  1:823131/136‑1 (MQ=255)                                tCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGaaaataccgccgccgatgtcattagtcctta                                                                                                            <  1:70374‑M1/143‑32 (MQ=255)                                  agcggcgtATCATGGCCGACAGTCGCTGTAGTTGCGTTTCCGAACATGGTATCGCCCATTTCCATAAGCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGTGGCGGaaaataccgccgccgatgtcattagtccttaaa                                                                                                          <  2:17511‑M1/140‑34 (MQ=255)                                   ggggCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGt                                                                                                         >  1:136812/1‑143 (MQ=255)                                    gggCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTa                                                                                                        <  2:404529/143‑1 (MQ=255)                                     ggCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTAc                                                                                                       <  1:86893/143‑1 (MQ=255)                                      gcgcATCATGGCCGACAGTCGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATCAGCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACa                                                                                                      <  2:415404/143‑1 (MQ=255)                                          atcatGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATATGCTGGCGCAGAAGTTTAAGGACTAATGCCATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTGGATGGAGTACAGCaa                                                                                                  >  2:58505/1‑143 (MQ=255)                                           tcatGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGAt                                                                                                              <  1:667245/130‑1 (MQ=255)                                           tcatGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGAt                                                                                                              >  2:667245/1‑130 (MQ=255)                                             atGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATTGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGt                                                                                               <  1:28414/143‑1 (MQ=255)                                                gCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAg                                                                                            >  1:765607/1‑143 (MQ=255)                                                  cGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGAc                                                                                          >  1:692826/1‑143 (MQ=255)                                                   gACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACt                                                                                         >  2:538621/1‑143 (MQ=255)                                                           cGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGCACCAACGACATCCGCGGCGGTATTATCCGCCGCTGGGCTGCTTTTTGATGGAGTACAGCAATGCCCGACTATCaacct                                                                                 >  2:844830/1‑140 (MQ=255)                                                              tAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGttt                                                                              <  1:538621/143‑1 (MQ=255)                                                                 tGGCATTTCCGGACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGCTCGCCAACACTGATGGCAGACTATCAAATGTTTGaa                                                                           <  2:799420/143‑1 (MQ=255)                                                                 tGGCATTTACGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGaa                                                                           <  1:118531/143‑1 (MQ=255)                                                                   gCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCCGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGATTACACCCAAGTCAGACTAACAAATGTTTGAAGt                                                                         >  1:615671/1‑143 (MQ=255)                                                                           gAACAGGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGa                                                                 <  2:82128/143‑1 (MQ=255)                                                                               aTGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCa                                                             >  1:523067/1‑143 (MQ=255)                                                                                tGGTATCGCCCATTTCCAGAGTCTGCGGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATGCTCCGCCGCTGGGCTGATGTTTGAGGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAg                                                            <  2:718866/143‑1 (MQ=255)                                                                                   tATCGCCCATTTCTATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCAACGCTGGGCAGATTTTTGATGGAGTACAGGAATGTCAGACTATCAAATGTTTGAAGTACAAGTGAGCAGGGtt                                                         >  2:327864/1‑143 (MQ=255)                                                                                   tATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGtt                                                         >  1:420975/1‑143 (MQ=255)                                                                                      cGCCCATTTCCATACTCTGCTGGCGCAGGTGTTTAAGGCCTATTGCCATCGGCGGCGGTATTTTCCGCCGCTGGGCTTATTTTTGATGGAGCACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGaa                                                      <  2:476546/143‑1 (MQ=255)                                                                                      cGCCCATTTCCATAATCTGGTGGCGCACGTCTCGAGCGAGTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGaa                                                      <  2:398212/143‑1 (MQ=255)                                                                                      cGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGaa                                                      <  1:420022/143‑1 (MQ=255)                                                                                            tttCCATAATCTGCTGGCGCAGTTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGTCGCTGGGCTGATTTTTGATGGAGTCAAGTAATGCCATACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCtt                                                <  1:210521/143‑1 (MQ=255)                                                                                             ggccATAATCGGCTGGCGCAGGGGTTTATGGACTAATGACATCGGCGGCGGGATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCGATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTa                                               <  1:524990/141‑1 (MQ=255)                                                                                                cATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCACTGGGCTGATTTTTGAGGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCg                                            >  1:768121/1‑143 (MQ=255)                                                                                                      ctgctgGCGCAGTTTTGTAAGGACTAATTGCATCGGCGGCGGTATTTTCCGCTGTTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAgg                                      <  2:821772/143‑1 (MQ=255)                                                                                                      ctgctgGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAgg                                      <  2:690904/143‑1 (MQ=255)                                                                                                              gcAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGc                              >  2:868827/1‑143 (MQ=255)                                                                                                                     tttAAGGACTAATGACATCGGCGGCGGTATTTTccgccaccgatgtcattagtccttaaacacctgcgccagcagcttatggaaatgggcgataccatgttcggaaacgcaactacagcgactgtcggccatgatacgccgct                       <  2:17511‑M2/143‑111 (MQ=255)                                                                                                                       tAAGGACTAATGACATCGGCGGCGGTATTTTccgccgccgatgtcattagtccttaaacacctgcgccagcagattatggaaatgggcgataccatgttcggaaatgccactaccgctactgtcggccatgatgcgcccctga                     <  1:70374‑M2/143‑113 (MQ=255)                                                                                                                         aGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAGGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCtggt                   >  1:516760/1‑143 (MQ=255)                                                                                                                          ggACTAATGACATCGGCGGCGGTATTTTCCGTCTCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAAGGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCtggtg                  <  1:58505/143‑1 (MQ=255)                                                                                                                          ggACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCtggtg                  >  2:293324/1‑143 (MQ=255)                                                                                                                                aTGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAAcc            >  1:756183/1‑143 (MQ=255)                                                                                                                                     ccccgcggcggaacataccgccgccgatgtcattagtccttaaacacctgcgccagcagattatggaaatgggcgataccatgttcggaaatgccactaccgctactgtcggccatgatgcgcccctgaccacgatagccacg       <  2:487522‑M1/139‑133 (MQ=255)                                                                                                                                        ggcggcggTATTTTccgccgccgatgtcattagtccttaaacacctgcgccagcagatcatggaaatgggcgataccatgttcggaaatgccactaccgctactgtcggccatgatgcgcccctgaccacgatagccacgcga    <  2:902441‑M2/143‑130 (MQ=255)                                                                                                                                          cggcggTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGCTGCAACGCTTCACGCTGGTGGCAACCGCTTGCAAAc  >  1:478296/1‑143 (MQ=255)                                                                                                                                               |                                                                                                                                          AGAAAGGGCTGAAATCGCGTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAACCGATGGCAAAC  >  NC_000913/1885662‑1885941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.