New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1885804	39 (0.850)	3 (0.070)	3/250	NT	7.4%	intergenic (+15/‑41)	yeaW/yeaX	carnitine monooxygenase subunit YeaW/carnitine monooxygenase subunit YeaX
	?	NC_000913	= 1885810	38 (0.880)					intergenic (+21/‑35)	yeaW/yeaX	carnitine monooxygenase subunit YeaW/carnitine monooxygenase subunit YeaX

CGCGTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAACCGATGGCAAACCATTACCTGCG  >  NC_000913/1885677‑1885952                                                                                                                                      |                                                                                                                                               cgcgTGGCGAGCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTg                                                                                                                                       <  1:888726/143‑1 (MQ=255)   cgTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATGTTccgccgcgggg                                                                                                                                     <  2:487522‑M2/143‑12 (MQ=255)          aTCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGAttt                                                                                                                              >  1:44293/1‑143 (MQ=255)           tCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCGTTTCCATAATCTGCTGGCGCAGGGGTTTAAGGACTAATGACATGGGCGGCGGTATTCTCCGCCGCCGGGCTGAtttt                                                                                                                             >  1:769390/1‑143 (MQ=255)              tgctcctgggCGCAGCATGCCCGCCAGCAGCGGTAGTGGCATTTCCGCACATGGTATCGCCCATCTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGa                                                                                                                          <  1:823131/136‑1 (MQ=255)                    ggggCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGt                                                                                                                    >  1:136812/1‑143 (MQ=255)                     gggCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTa                                                                                                                   <  2:404529/143‑1 (MQ=255)                      ggCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTAc                                                                                                                  <  1:86893/143‑1 (MQ=255)                       gcgcATCATGGCCGACAGTCGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATCAGCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACa                                                                                                                 <  2:415404/143‑1 (MQ=255)                           atcatGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATATGCTGGCGCAGAAGTTTAAGGACTAATGCCATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTGGATGGAGTACAGCaa                                                                                                             >  2:58505/1‑143 (MQ=255)                            tcatGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGAt                                                                                                                         >  2:667245/1‑130 (MQ=255)                            tcatGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGAt                                                                                                                         <  1:667245/130‑1 (MQ=255)                              atGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATTGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGt                                                                                                          <  1:28414/143‑1 (MQ=255)                                 gCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAg                                                                                                       >  1:765607/1‑143 (MQ=255)                                   cGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGAc                                                                                                     >  1:692826/1‑143 (MQ=255)                                    gACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACt                                                                                                    >  2:538621/1‑143 (MQ=255)                                            cGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGCACCAACGACATCCGCGGCGGTATTATCCGCCGCTGGGCTGCTTTTTGATGGAGTACAGCAATGCCCGACTATCaacct                                                                                            >  2:844830/1‑140 (MQ=255)                                               tAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGttt                                                                                         <  1:538621/143‑1 (MQ=255)                                                  tGGCATTTCCGGACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGCTCGCCAACACTGATGGCAGACTATCAAATGTTTGaa                                                                                      <  2:799420/143‑1 (MQ=255)                                                  tGGCATTTACGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGaa                                                                                      <  1:118531/143‑1 (MQ=255)                                                    gCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCCGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGATTACACCCAAGTCAGACTAACAAATGTTTGAAGt                                                                                    >  1:615671/1‑143 (MQ=255)                                                            gAACAGGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGa                                                                            <  2:82128/143‑1 (MQ=255)                                                                aTGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCa                                                                        >  1:523067/1‑143 (MQ=255)                                                                 tGGTATCGCCCATTTCCAGAGTCTGCGGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATGCTCCGCCGCTGGGCTGATGTTTGAGGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAg                                                                       <  2:718866/143‑1 (MQ=255)                                                                    tATCGCCCATTTCTATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCAACGCTGGGCAGATTTTTGATGGAGTACAGGAATGTCAGACTATCAAATGTTTGAAGTACAAGTGAGCAGGGtt                                                                    >  2:327864/1‑143 (MQ=255)                                                                    tATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGtt                                                                    >  1:420975/1‑143 (MQ=255)                                                                       cGCCCATTTCCATACTCTGCTGGCGCAGGTGTTTAAGGCCTATTGCCATCGGCGGCGGTATTTTCCGCCGCTGGGCTTATTTTTGATGGAGCACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGaa                                                                 <  2:476546/143‑1 (MQ=255)                                                                       cGCCCATTTCCATAATCTGGTGGCGCACGTCTCGAGCGAGTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGaa                                                                 <  2:398212/143‑1 (MQ=255)                                                                       cGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGaa                                                                 <  1:420022/143‑1 (MQ=255)                                                                             tttCCATAATCTGCTGGCGCAGTTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGTCGCTGGGCTGATTTTTGATGGAGTCAAGTAATGCCATACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCtt                                                           <  1:210521/143‑1 (MQ=255)                                                                              ggccATAATCGGCTGGCGCAGGGGTTTATGGACTAATGACATCGGCGGCGGGATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCGATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTa                                                          <  1:524990/141‑1 (MQ=255)                                                                                 cATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCACTGGGCTGATTTTTGAGGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCg                                                       >  1:768121/1‑143 (MQ=255)                                                                                       ctgctgGCGCAGTTTTGTAAGGACTAATTGCATCGGCGGCGGTATTTTCCGCTGTTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAgg                                                 <  2:821772/143‑1 (MQ=255)                                                                                       ctgctgGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAgg                                                 <  2:690904/143‑1 (MQ=255)                                                                                               gcAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGc                                         >  2:868827/1‑143 (MQ=255)                                                                                                      tttAAGGACTAATGACATCGGCGGCGGTATTTTccgccaccgatgtcattagtccttaaacacctgcgccagcagcttatggaaatgggcgataccatgttcggaaacgcaactacagcgactgtcggccatgatacgccgct                                  <  2:17511‑M2/143‑111 (MQ=255)                                                                                                        tAAGGACTAATGACATCGGCGGCGGTATTTTccgccgccgatgtcattagtccttaaacacctgcgccagcagattatggaaatgggcgataccatgttcggaaatgccactaccgctactgtcggccatgatgcgcccctga                                <  1:70374‑M2/143‑113 (MQ=255)                                                                                                          aGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAGGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCtggt                              >  1:516760/1‑143 (MQ=255)                                                                                                           ggACTAATGACATCGGCGGCGGTATTTTCCGTCTCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAAGGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCtggtg                             <  1:58505/143‑1 (MQ=255)                                                                                                           ggACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCtggtg                             >  2:293324/1‑143 (MQ=255)                                                                                                                 aTGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAAcc                       >  1:756183/1‑143 (MQ=255)                                                                                                                         ggcggcggTATTTTccgccgccgatgtcattagtccttaaacacctgcgccagcagatcatggaaatgggcgataccatgttcggaaatgccactaccgctactgtcggccatgatgcgcccctgaccacgatagccacgcga               <  2:902441‑M2/143‑130 (MQ=255)                                                                                                                           cggcggTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGCTGCAACGCTTCACGCTGGTGGCAACCGCTTGCAAAc             >  1:478296/1‑143 (MQ=255)                                                                                                                                   ttttCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAACCGATGGCAAACCATTACCt     >  2:488802/1‑143 (MQ=255)                                                                                                                                      tCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAACCGATGGCAAACCATTACCTGCg  >  1:327426/1‑143 (MQ=255)                                                                                                                                      |                                                                                                                                               CGCGTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAATGACATCGGCGGCGGTATTTTCCGCCGCTGGGCTGATTTTTGATGGAGTACAGCAATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAACCGATGGCAAACCATTACCTGCG  >  NC_000913/1885677‑1885952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.