| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2035286 = | 46 (1.000) | 3 (0.070) | 3/240 | NT | 7.0% | intergenic (+43/‑549) | yedS/hchA | putative outer membrane protein YedS, N‑terminal fragment/protein/nucleic acid deglycase 1 |
| ? | NC_000913 | 2035318 = | 38 (0.910) | intergenic (+75/‑517) | yedS/hchA | putative outer membrane protein YedS, N‑terminal fragment/protein/nucleic acid deglycase 1 | |||||
TTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAATAACATCAACCAGCTACTCTTCA > NC_000913/2035144‑2035428 | ttACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTa > 1:787099/1‑143 (MQ=255)agtcagaaagaaatgcatgtggatgttagcttgaagagtagcgggttgatgttagtgtgccaggtggggcagggtaaggtgctgtatcgatatgcttcggcaattgcgtgtgccgcagatggagatgaaatgccaataaaaaa > 2:15859‑M1/143‑143 (MQ=255) ttcataaagaaatggatttgggtgttagcttgaagagtagctggttgatgttattgtgccaggaggggcagggtaaggtgctgtatcgatatgcttcggcaattgcgtgtgccgcagatggagatgaaatgccaataaaaaAg > 2:418109‑M1/142‑143 (MQ=255) ataaagaaatgcatttgggtgttagcttgaagagtagctggttgatgttattgtgccaggaggggcagggtaaggtgctgtatcgatatgcttcggcaattgcgtgtgccgcagatggagatgaaatgccaataaaaaAGCCt < 1:28086‑M1/5‑1 (MQ=255) taaagaaatgcatttgggtgttagcttgaagagtagctggttgatgttattgtgccaggaggggcagggtaaggtgctgtatcgatatgcttcggcaattgcgtgtgccgcagatggagatgaaatgccaataaaaaAGCCTg < 1:195478‑M1/6‑1 (MQ=255) taaagaaatgcatttgggtgttagcttgaagagtagctggttgatgttattgtgccaggaggggcagggtaaggtgctgtatcgatatgcttcggcaattgcgtgtgccgcagatggagatgaaatgccaataaaaaAGCCTg < 1:875627‑M1/6‑1 (MQ=255) aaaTCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACAGATGATATCGTTGCTGTGGGCTTAGTCTAAAAGTTCTAATAAGTAAATTCGCTGCGGCGTGTCACTGTCAAACTAAACACTAgaatg > 2:595566/1‑139 (MQ=255) aaagaaatgcatttgggtgttagcttgaagagtagctggttgatgttattgtgccaggaggggcagggtaaggtgctgtatcgatatgcttcggcaattgcgtgtgccgcagatggagatgaaatgccaataaaaaAGCCTGa < 1:465879‑M1/7‑1 (MQ=255) aaCCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTATAATCAGTCAACTCGCTGCGGCGTGTTACTGTACAACTGAAGACTGGGCTGAGGTc > 1:185935/1‑143 (MQ=255) aatgcatttgggggatagcatgaagagtagcgggttgatgttattgtgccaggaggggcagggtaaggtgctgtatctatatgcttcggcaattgcgtgtgccgcagatggagatgaaatgccaataaaaaAGCCTGAGTTCg > 1:169715‑M1/132‑143 (MQ=255) gcagaaCAAAGACGATGACTAATACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTccc < 1:740453/138‑1 (MQ=255) aCAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATc > 1:812680/1‑143 (MQ=255) cAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTCACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCg > 2:827301/1‑143 (MQ=255) aaCGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGa > 1:776520/1‑143 (MQ=255) ccgacgaTGCCCTCTACGAAGTAAACGGCATCGCTACCGATGCTATCGTTGCTGTGGGCTTAGTCTACCAGGTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGaa < 2:570946/142‑1 (MQ=255) gcttgaagagtagctggttgatgttagtgtgccaggaggggcagggtaaggtgctgtatctatatgcttgggcaattgcgtgtgccgcagatggagatgaaatgccaataaaaaAGCCTGAGTTCGTCCCTCATCGAACTCAg > 2:688522‑M1/115‑143 (MQ=255) ttCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCtttt < 2:702674/143‑1 (MQ=255) tCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCttttt < 2:251260/143‑1 (MQ=255) tgaaaaaaaCGGCATGGCTACAGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCCAATCAGTCAACTCGCTGCGGCGTGTTACTGTACAACTGAACACTCGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTAtt < 1:745041/137‑1 (MQ=255) gctggttgatggtattgtgccaggaggggcagggtaaggtgctgtatcgatatgcttcggcaattgcgtgtgccgcagatggagatgaaatgccaataaaaaAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTg > 1:627878‑M1/103‑143 (MQ=255) gAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCACCAAACTCTGGATTGTTTATTg > 1:427143/1‑143 (MQ=255) aGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGc < 2:9904/143‑1 (MQ=255) aTCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCAtctc > 1:636064/1‑143 (MQ=255) cGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCg < 1:842091/143‑1 (MQ=255) cGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCACTGCGCGGGGGTAGTTTAAAACTGAACGCGAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCg < 1:908013/143‑1 (MQ=255) cGATGATATAGTTGCTGTTGGATTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCg < 1:308152/143‑1 (MQ=255) ggaggggtagggtatggtgttgtatcaatatgcttcggaaattgcgtgtgcggcagagggagaggaaatgccaataaaaaAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGc > 1:62657‑M1/81‑143 (MQ=255) atgatATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGc < 2:372008/143‑1 (MQ=255) atatCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAAGTAAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTTCGGcacc > 1:572467/1‑142 (MQ=255) tgcttGCTCTGGGCTGAGTCTACCAGTTCTAGTCAGTAAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGc < 2:140281/140‑1 (MQ=255) cgtGCTGTGTGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCaa < 2:205087/141‑1 (MQ=255) tGCTGTGGGCTTAGTCAACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAAtt < 1:182630/143‑1 (MQ=255) tgtgGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCCGCACACGCAAGTGcc > 1:662650/1‑143 (MQ=255) tgGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCCTCTGCGGCCCACGCAATTGCCGa > 1:258866/1‑143 (MQ=255) gggCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGGTCGTCCCTCATCGAACTCAGGCTTTGTTATTGGCATTTCATCTAGATCTGCGACACACGCAATTGCAGac > 2:700719/1‑142 (MQ=255) gggCGTAGTTTACCAGTTCTAATCAGTCAACTCGGTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGaa < 2:266797/143‑1 (MQ=255) tACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCAGCTGCGGCACACGCAATTGCCGCAGCATATCGAt > 1:5243/1‑143 (MQ=255) gaCCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGAt < 1:786149/142‑1 (MQ=255) atcggctCTAATCAGGCAACTCGCTGCGGGTTGTTACTGTAGAACTGAACACTAGCCTGAGCTCGTCACTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATa < 2:847066/137‑1 (MQ=255) aCCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATa < 1:892666/143‑1 (MQ=255) aGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCCTCTGCGGCACCCGCAAGTGGCCAAGCATATCGATACAg > 2:142775/1‑143 (MQ=255) ttCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGcc > 2:206382/1‑142 (MQ=255) ctctacgcAGTCAACGCGCTGCAGCGGTTTCCGTTAAGACTGACCCCTAGCGTGAGTTCGCGCCTCGTCGAACTCGGGCTTTTTTATTTGCATTTCGGCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCa < 2:182224/136‑1 (MQ=255) gtAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCAGCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCAGCACACGCAATTGCCGAAGCATAACGATACAGCAcc > 2:263413/2‑143 (MQ=255) tAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCt > 1:500682/1‑143 (MQ=255) aaTCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGGTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGCCACACGCAATCGCCGACGCATAACGATACCACAccct > 2:510989/1‑141 (MQ=255) aCTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGccc < 1:816540/143‑1 (MQ=255) tgtTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTTTTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAAt < 1:595566/143‑1 (MQ=255) gttatcttAAAACCGAACACTAGCCTGAGGTCGTCCCTCTTCGAACTCAGGGTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAATa < 2:74704/136‑1 (MQ=255) tACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAATAAc > 2:487056/1‑143 (MQ=255) tGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAATAACATc > 2:195478/1‑143 (MQ=255) tAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTTCATCTGCGCCACACGCAATTGCCGCAACAAACAAATTAATAACTTTAGCCTCCCCCCCCCGACACAATAACACCac > 2:885529/1‑142 (MQ=255) aaaaCTGAACACTAGGGTGAGTGCGTCCCTCAGCGAAATAAGGCGTTTTTATTGGCATTTACGCTCAATCTGCGGCAGACGCAATCGCCGAAGCATATCGATACAGCACCTTACTCTGCCCCTCCCGGCACAATAACATAAAc < 2:575853/143‑1 (MQ=255) aaaaCTCAACACTAGCCCGAGTTCGTCCCTTCTCGAACTCAGGTTCTTTTATTTGCATTTCATCTCCATCGGCCGCACACGCAATTGCCGAAGCCTATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAATAACATCAAc < 2:738220/143‑1 (MQ=255) aaaCTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCGCAGTAACATCAAcc > 1:59070/1‑143 (MQ=255) aaCTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACCCAATTGCCGAAGCATATCGCTACAGATCCTTACCCCGCACATCCTACCAAAACAATATCAACCa > 2:74319/1‑143 (MQ=255) cTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCAGATTGGCCCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAATAACATCAACCAGc < 1:206382/143‑1 (MQ=255) tGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAATAACATCCACCAGCt > 1:730741/1‑143 (MQ=255) AGCCTGAGTTCGTCCCACATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAATAACATCAACCAGCTACTCTTCa > 1:305222‑M1/1‑143 (MQ=255) | TTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAATCAGTCAACTCGCTGCGGCGTGTTACTGTAAAACTGAACACTAGCCTGAGTTCGTCCCTCATCGAACTCAGGCTTTTTTATTGGCATTTCATCTCCATCTGCGGCACACGCAATTGCCGAAGCATATCGATACAGCACCTTACCCTGCCCCTCCTGGCACAATAACATCAACCAGCTACTCTTCA > NC_000913/2035144‑2035428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |